RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 CAPS2Q9BXY5 557 aa11.34□□□□□ -0.59
MTHFD1-207ENST00000554677 ALOXE3Q9BYJ1 711 aa11.34□□□□□ -0.59
MTHFD1-207ENST00000554677 UCK2Q9BZX2 261 aa11.34□□□□□ -0.59
MTHFD1-207ENST00000554677 ZDHHC11Q9H8X9 412 aa11.34□□□□□ -0.59
MTHFD1-207ENST00000554677 MCCC2Q9HCC0 563 aa11.34□□□□□ -0.59
MTHFD1-207ENST00000554677 TIMMDC1Q9NPL8 285 aa11.34□□□□□ -0.59
MTHFD1-207ENST00000554677 DNAJC11Q9NVH1 559 aa11.34□□□□□ -0.59
MTHFD1-207ENST00000554677 RNF6Q9Y252 685 aa11.34□□□□□ -0.59
MTHFD1-207ENST00000554677 SNX24Q9Y343 169 aa11.34□□□□□ -0.59
MTHFD1-207ENST00000554677 ABCA4P78363 2273 aa11.34□□□□□ -0.59
MTHFD1-207ENST00000554677 A8MVJ9 347 aa11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 EFCAB8A8MWE9 144 aa11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 WWP2O00308 870 aa11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 FANCGO15287 622 aa11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 PHGDHO43175 533 aaKnown RBP11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 STK16O75716 305 aa11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 GLSO94925 669 aaPredicted RBP11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 TUBB4AP04350 444 aa11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 CCDC166P0CW27 439 aa11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 SSTR1P30872 391 aa11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 CASP2P42575 452 aa11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 PPIAP62937 165 aaKnown RBP11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 MRPS25P82663 173 aaKnown RBP11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 BMPR2Q13873 1038 aa11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 GXYLT1Q4G148 440 aa11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 TMEM211Q6ICI0 200 aa11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 SULT1C3Q6IMI6 304 aa11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 ARHGAP11AQ6P4F7 1023 aa11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 TRIM40Q6P9F5 258 aa11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 GPSM1Q86YR5 675 aa11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 GPALPP1Q8IXQ4 340 aa11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 EID3Q8N140 333 aa11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 MORN4Q8NDC4 146 aa11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 SREK1Q8WXA9 508 aaKnown RBP11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 ANKRD9Q96BM1 317 aaPredicted RBP11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 PTCD3Q96EY7 689 aaKnown RBP11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 SCYL1Q96KG9 808 aa11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 UBXN10Q96LJ8 280 aa11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 RUNDC3BQ96NL0 473 aa11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 MAPKAP1Q9BPZ7 522 aa11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 CCDC77Q9BR77 488 aa11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 TP63Q9H3D4 680 aaPredicted RBP11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 HPF1Q9NWY4 346 aa11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 NSMCE4AQ9NXX6 385 aa11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 COQ3Q9NZJ6 369 aa11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 ERVK-11Q9UQG0 969 aa11.33□□□□□ -0.6
MTHFD1-207ENST00000554677 NAV3Q8IVL0 2385 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 A0A088AWK7 358 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 NKX2-6A6NCS4 301 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 FAM166BA8MTA8 275 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 G3V3Y1 287 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 RTCAO00442 366 aaKnown RBP11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 CLGNO14967 610 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 LDB3O75112 727 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 ETHE1O95571 254 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 IFNA16P05015 189 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 ZNF10P21506 573 aaPredicted RBP11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 CNR1P21554 472 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 ATP5A1P25705 553 aaKnown RBP11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 NUP107P57740 925 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 RNF4P78317 190 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 PMPCAQ10713 525 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 FOXO1Q12778 655 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 DLG1Q12959 904 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 EFTUD2Q15029 972 aaKnown RBP eCLIP11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 TBCCQ15814 346 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 HSDL2Q6YN16 418 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 CAPN12Q6ZSI9 719 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 CYS1Q717R9 158 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 CCDC71Q8IV32 467 aaPredicted RBP11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 ZBED8Q8IZ13 594 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 TCAIMQ8N3R3 496 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 PDPRQ8NCN5 879 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 OR8K3Q8NH51 312 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 ZNF721Q8TF20 911 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 ZNF473Q8WTR7 871 aaKnown RBP11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 ASB5Q8WWX0 329 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 ASB15Q8WXK1 588 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 RND1Q92730 232 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 DAZLQ92904 295 aaKnown RBP11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 KIAA1191Q96A73 305 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 GPR22Q99680 433 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 TMUB1Q9BVT8 246 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 MS4A8Q9BY19 250 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 TTTY12Q9BZ98 90 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 LYRM4Q9HD34 91 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 WWOXQ9NZC7 414 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 MRPS33Q9Y291 106 aaKnown RBP11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 LIPGQ9Y5X9 500 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 CLCA3PQ9Y6N3 262 aa11.32□□□□□ -0.6
MTHFD1-207ENST00000554677 ACANP16112 2415 aa11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 A0A1B0GVC2 190 aa11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 NPIPA2E9PIF3 369 aa11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 NPIPA3F8WFD2 350 aa11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 CCDC188H7C350 402 aa11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 IGHG3P01860 377 aa11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 CHRNB4P30926 498 aa11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 GPX6P59796 221 aa11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 IGLV3-21P80748 117 aaPredicted RBP11.31□□□□□ -0.6
MTHFD1-207ENST00000554677 ID2Q02363 134 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms