RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 TBX18O95935 607 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 IGSF6O95976 241 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 FTH1P02794 183 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 ANXA5P08758 320 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 H2AFB1P0C5Y9 115 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 H2AFB2P0C5Z0 115 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 C1GALT1C1LP0DN25 315 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 UGT2B7P16662 529 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 PEBP1P30086 187 aaKnown RBP3.27□□□□□ -1.89
SEC23A-207ENST00000554615 PSMD7P51665 324 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 CLDN20P56880 219 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 ZNF763Q0D2J5 394 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 ELP6Q0PNE2 266 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 PIN1Q13526 163 aaPredicted RBP3.27□□□□□ -1.89
SEC23A-207ENST00000554615 MINDY4Q4G0A6 757 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 LRRC23Q53EV4 343 aaPredicted RBP3.27□□□□□ -1.89
SEC23A-207ENST00000554615 PLA1AQ53H76 456 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 ZNF805Q5CZA5 627 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 PIP5KL1Q5T9C9 394 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 CACHD1Q5VU97 1274 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.27□□□□□ -1.89
SEC23A-207ENST00000554615 LIPIQ6XZB0 460 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 NANOGNBQ7Z5D8 188 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 THOC6Q86W42 341 aaKnown RBP3.27□□□□□ -1.89
SEC23A-207ENST00000554615 CIR1Q86X95 450 aaPredicted RBP3.27□□□□□ -1.89
SEC23A-207ENST00000554615 ZDHHC21Q8IVQ6 265 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 OR2L13Q8N349 312 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 SPATA6LQ8N4H0 392 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 EIF4E3Q8N5X7 224 aaKnown RBP3.27□□□□□ -1.89
SEC23A-207ENST00000554615 OR2L8Q8NGY9 312 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 OR5K2Q8NHB8 316 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 BBS10Q8TAM1 723 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 RASSF5Q8WWW0 418 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 PHYHIPQ92561 330 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 HSH2DQ96JZ2 352 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 HBEGFQ99075 208 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 C17orf80Q9BSJ5 609 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 RAB33BQ9H082 229 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 HIPK2Q9H2X6 1198 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 C1orf198Q9H425 327 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 RUBCNLQ9H714 662 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 HMG20AQ9NP66 347 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 AASDHPPTQ9NRN7 309 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 WBP1LQ9NX94 342 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 UBP1Q9NZI7 540 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 SPASTQ9UBP0 616 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 VPS29Q9UBQ0 182 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 PRKAG2Q9UGJ0 569 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 SNRNP200O75643 2136 aaKnown RBP3.27□□□□□ -1.89
SEC23A-207ENST00000554615 TRBC2A0A5B9 178 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 HMX3A6NHT5 357 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 C4orf51C9J302 202 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 LEFTY2O00292 366 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 BHLHE40O14503 412 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 IMPA2O14732 288 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 IDH3BO43837 385 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 HCN1O60741 890 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 LDB3O75112 727 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 CNOT3O75175 753 aaKnown RBP3.27□□□□□ -1.89
SEC23A-207ENST00000554615 CSO75390 466 aaKnown RBP3.27□□□□□ -1.89
SEC23A-207ENST00000554615 KRT6AP02538 564 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 KRT6BP04259 564 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 HBQ1P09105 142 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 EPB42P16452 691 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 DRD5P21918 477 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 IGFBP5P24593 272 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 FPR3P25089 353 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 RPL10P27635 214 aaKnown RBP3.27□□□□□ -1.89
SEC23A-207ENST00000554615 CD70P32970 193 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 CCR2P41597 374 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 KRT6CP48668 564 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 RGS4P49798 205 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 ZNF133P52736 654 aaPredicted RBP3.27□□□□□ -1.89
SEC23A-207ENST00000554615 ZNF136P52737 540 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 MAXP61244 160 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 RPP38P78345 283 aaKnown RBP3.27□□□□□ -1.89
SEC23A-207ENST00000554615 RAB40BQ12829 278 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 IL10RAQ13651 578 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 DOC2AQ14183 400 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 PCK2Q16822 640 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 FAM174BQ3ZCQ3 159 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 PLK5Q496M5 336 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 SLC35F1Q5T1Q4 408 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 LAMTOR1Q6IAA8 161 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 TCTN3Q6NUS6 607 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 XKRXQ6PP77 449 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 CXCL17Q6UXB2 119 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 GDPD3Q7L5L3 318 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 HSD11B1LQ7Z5J1 315 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 RNF180Q86T96 592 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 ZDHHC13Q8IUH4 622 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 MMAAQ8IVH4 418 aaKnown RBP3.27□□□□□ -1.89
SEC23A-207ENST00000554615 GHDCQ8N2G8 530 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 LSMEM1Q8N8F7 131 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 OR7G3Q8NG95 312 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 SSC4DQ8WTU2 575 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 FAM149B1Q96BN6 582 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 LGALS12Q96DT0 336 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 HSPBAP1Q96EW2 488 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 TRMT61AQ96FX7 289 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms