RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 ATCAYQ86WG3 371 aa11.77□□□□□ -0.53
SHMT2-214ENST00000554604 PGAM4Q8N0Y7 254 aa11.77□□□□□ -0.53
SHMT2-214ENST00000554604 FBXW8Q8N3Y1 598 aa11.77□□□□□ -0.53
SHMT2-214ENST00000554604 EFCAB3Q8N7B9 438 aa11.77□□□□□ -0.53
SHMT2-214ENST00000554604 STT3BQ8TCJ2 826 aa11.77□□□□□ -0.53
SHMT2-214ENST00000554604 MMABQ96EY8 250 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-214ENST00000554604 CLPTM1LQ96KA5 538 aa11.77□□□□□ -0.53
SHMT2-214ENST00000554604 MARK4Q96L34 752 aa11.77□□□□□ -0.53
SHMT2-214ENST00000554604 C3orf30Q96M34 536 aa11.77□□□□□ -0.53
SHMT2-214ENST00000554604 ANKRD27Q96NW4 1050 aa11.77□□□□□ -0.53
SHMT2-214ENST00000554604 SERPINI1Q99574 410 aa11.77□□□□□ -0.53
SHMT2-214ENST00000554604 SMAD5Q99717 465 aaKnown RBP11.77□□□□□ -0.53
SHMT2-214ENST00000554604 MFRPQ9BY79 579 aa11.77□□□□□ -0.53
SHMT2-214ENST00000554604 SLAMF7Q9NQ25 335 aa11.77□□□□□ -0.53
SHMT2-214ENST00000554604 C5AR2Q9P296 337 aa11.77□□□□□ -0.53
SHMT2-214ENST00000554604 TRPC4Q9UBN4 977 aa11.77□□□□□ -0.53
SHMT2-214ENST00000554604 NKX1-2Q9UD57 310 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-214ENST00000554604 PTBP2Q9UKA9 531 aaKnown RBP11.77□□□□□ -0.53
SHMT2-214ENST00000554604 SPTBN1Q01082 2364 aaKnown RBP11.77□□□□□ -0.53
SHMT2-214ENST00000554604 NCF1BA6NI72 391 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-214ENST00000554604 VSTM2BA6NLU5 285 aa11.76□□□□□ -0.53
SHMT2-214ENST00000554604 NCF1CA8MVU1 366 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-214ENST00000554604 MASP2O00187 686 aa11.76□□□□□ -0.53
SHMT2-214ENST00000554604 AIM2O14862 343 aa11.76□□□□□ -0.53
SHMT2-214ENST00000554604 FKBP6O75344 327 aa11.76□□□□□ -0.53
SHMT2-214ENST00000554604 CRCPO75575 148 aa11.76□□□□□ -0.53
SHMT2-214ENST00000554604 GUCA1CO95843 209 aa11.76□□□□□ -0.53
SHMT2-214ENST00000554604 ENO2P09104 434 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-214ENST00000554604 PRR35P0CG20 571 aa11.76□□□□□ -0.53
SHMT2-214ENST00000554604 NCF1P14598 390 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-214ENST00000554604 LBPP18428 481 aa11.76□□□□□ -0.53
SHMT2-214ENST00000554604 MTTPP55157 894 aa11.76□□□□□ -0.53
SHMT2-214ENST00000554604 FOXA1P55317 472 aa11.76□□□□□ -0.53
SHMT2-214ENST00000554604 STX1BP61266 288 aa11.76□□□□□ -0.53
SHMT2-214ENST00000554604 VWA2Q5GFL6 755 aa11.76□□□□□ -0.53
SHMT2-214ENST00000554604 XKR7Q5GH72 579 aa11.76□□□□□ -0.53
SHMT2-214ENST00000554604 C1orf146Q5VVC0 180 aa11.76□□□□□ -0.53
SHMT2-214ENST00000554604 JMJD6Q6NYC1 403 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-214ENST00000554604 KIRREL2Q6UWL6 708 aa11.76□□□□□ -0.53
SHMT2-214ENST00000554604 RNF165Q6ZSG1 346 aa11.76□□□□□ -0.53
SHMT2-214ENST00000554604 SPATA19Q7Z5L4 167 aa11.76□□□□□ -0.53
SHMT2-214ENST00000554604 MYLK4Q86YV6 388 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-214ENST00000554604 ATL1Q8WXF7 558 aa11.76□□□□□ -0.53
SHMT2-214ENST00000554604 TM9SF4Q92544 642 aa11.76□□□□□ -0.53
SHMT2-214ENST00000554604 JADE3Q92613 823 aa11.76□□□□□ -0.53
SHMT2-214ENST00000554604 RCN3Q96D15 328 aa11.76□□□□□ -0.53
SHMT2-214ENST00000554604 HAUS8Q9BT25 410 aa11.76□□□□□ -0.53
SHMT2-214ENST00000554604 TUBB1Q9H4B7 451 aa11.76□□□□□ -0.53
SHMT2-214ENST00000554604 AKTIPQ9H8T0 292 aa11.76□□□□□ -0.53
SHMT2-214ENST00000554604 SYNPO2LQ9H987 977 aa11.76□□□□□ -0.53
SHMT2-214ENST00000554604 STX18Q9P2W9 335 aaKnown RBP11.76□□□□□ -0.53
SHMT2-214ENST00000554604 STOML1Q9UBI4 398 aa11.76□□□□□ -0.53
SHMT2-214ENST00000554604 C3orf18Q9UK00 162 aa11.76□□□□□ -0.53
SHMT2-214ENST00000554604 HS3ST3B1Q9Y662 390 aa11.76□□□□□ -0.53
SHMT2-214ENST00000554604 SPTAN1Q13813 2472 aaKnown RBP11.75□□□□□ -0.53
SHMT2-214ENST00000554604 A0A0A6YYC8 382 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-214ENST00000554604 I3L1I5 382 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-214ENST00000554604 SOCS6O14544 535 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 P2RX6O15547 441 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 ALOX12BO75342 701 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 KRT36O76013 467 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 ANP32DO95626 131 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 STATHP02808 62 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 CDH1P12830 882 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 ACPPP15309 386 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 CD1EP15812 388 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 GPX3P22352 226 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 CXCR2P25025 360 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 AVPR1BP47901 424 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 CSNK1G2P78368 415 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 CDKL1Q00532 357 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 ART3Q13508 389 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 GTF2H2Q13888 395 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 FAM53BQ14153 422 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 RCN1Q15293 331 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 GSTA3Q16772 222 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 AGKQ53H12 422 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 GTF2H2CQ6P1K8 395 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 LCTLQ6UWM7 567 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 HACD2Q6Y1H2 254 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 BNC2Q6ZN30 1099 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-214ENST00000554604 GK5Q6ZS86 529 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 GOLGA7Q7Z5G4 137 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 DDIASQ8IXT1 998 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.75□□□□□ -0.53
SHMT2-214ENST00000554604 OR11G2Q8NGC1 345 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 CPT1CQ8TCG5 803 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 PYCR2Q96C36 320 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 THAP11Q96EK4 314 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 KCNA7Q96RP8 456 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 SGPP1Q9BX95 441 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 MRPL1Q9BYD6 325 aaKnown RBP11.75□□□□□ -0.53
SHMT2-214ENST00000554604 MKKSQ9NPJ1 570 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-214ENST00000554604 C14orf105Q9NVL8 296 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 RIC8BQ9NVN3 520 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 TMEM45AQ9NWC5 275 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 LUZP4Q9P127 313 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 MAP10Q9P2G4 905 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 ZNF225Q9UK10 706 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 C15orf41Q9Y2V0 281 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms