RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 MAVSQ7Z434 540 aa13.21□□□□□ -0.29
SPTLC2-202ENST00000554365 MILR1Q7Z6M3 343 aa13.21□□□□□ -0.29
SPTLC2-202ENST00000554365 AGR3Q8TD06 166 aa13.21□□□□□ -0.29
SPTLC2-202ENST00000554365 PSMF1Q92530 271 aa13.21□□□□□ -0.29
SPTLC2-202ENST00000554365 ATP6V1E2Q96A05 226 aa13.21□□□□□ -0.29
SPTLC2-202ENST00000554365 ACTR8Q9H981 624 aa13.21□□□□□ -0.29
SPTLC2-202ENST00000554365 SYNPO2LQ9H987 977 aa13.21□□□□□ -0.29
SPTLC2-202ENST00000554365 MRPS30Q9NP92 439 aaKnown RBP13.21□□□□□ -0.29
SPTLC2-202ENST00000554365 TRPC4Q9UBN4 977 aa13.21□□□□□ -0.29
SPTLC2-202ENST00000554365 TRAF6Q9Y4K3 522 aa13.21□□□□□ -0.29
SPTLC2-202ENST00000554365 OR2A25A4D2G3 310 aa13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 GMNCA6NCL1 334 aa13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 IDSB3KWA1 339 aa13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 H7BY64 318 aa13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 CCL21O00585 134 aa13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 AZIN1O14977 448 aa13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 UNC5CO95185 931 aa13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 CCNDBP1O95273 360 aa13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 JUNP05412 331 aaKnown RBP13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 SERPINA7P05543 415 aa13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 ENO1P06733 434 aaKnown RBP13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 CELA2AP08217 269 aa13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 SNRPB2P08579 225 aaKnown RBP13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 SERPINB3P29508 390 aa13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 CMPK1P30085 196 aa13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 HTR6P50406 440 aa13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 RPL14P50914 215 aaKnown RBP13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 MEF2AQ02078 507 aaPredicted RBP13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 SRSF11Q05519 484 aaKnown RBP13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 ART3Q13508 389 aa13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 SLBPQ14493 270 aaKnown RBP eCLIP13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 INAQ16352 499 aa13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 RNF44Q7L0R7 432 aa13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 PAQR7Q86WK9 346 aa13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 CRLF3Q8IUI8 442 aa13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 CDYL2Q8N8U2 506 aa13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 ZNF740Q8NDX6 193 aa13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 ITLN2Q8WWU7 325 aaPredicted RBP13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 HAS2Q92819 552 aa13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 PTCD3Q96EY7 689 aaKnown RBP13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 C10orf90Q96M02 699 aa13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 PRAP1Q96NZ9 151 aa13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 ZFYVE21Q9BQ24 234 aa13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 DPH7Q9BTV6 452 aa13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 TUBB1Q9H4B7 451 aa13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 TMEM184CQ9NVA4 438 aa13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 MARCOQ9UEW3 520 aaPredicted RBP13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 SH3BGRL2Q9UJC5 107 aa13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 ZNF490Q9ULM2 529 aaPredicted RBP13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 CDC14AQ9UNH5 594 aa13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 TIMM22Q9Y584 194 aa13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 DNAJC15Q9Y5T4 150 aa13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 KLF2Q9Y5W3 355 aaPredicted RBP13.2□□□□□ -0.3
SPTLC2-202ENST00000554365 IGLV3-12A0A075B6K2 115 aa13.19□□□□□ -0.3
SPTLC2-202ENST00000554365 IGHV1-45A0A0A0MS14 117 aa13.19□□□□□ -0.3
SPTLC2-202ENST00000554365 RASAL1O95294 804 aa13.19□□□□□ -0.3
SPTLC2-202ENST00000554365 BMP10O95393 424 aa13.19□□□□□ -0.3
SPTLC2-202ENST00000554365 HEXBP07686 556 aa13.19□□□□□ -0.3
SPTLC2-202ENST00000554365 KITP10721 976 aa13.19□□□□□ -0.3
SPTLC2-202ENST00000554365 UROSP10746 265 aa13.19□□□□□ -0.3
SPTLC2-202ENST00000554365 ALOX15P16050 662 aaPredicted RBP13.19□□□□□ -0.3
SPTLC2-202ENST00000554365 HNF4AP41235 474 aa13.19□□□□□ -0.3
SPTLC2-202ENST00000554365 CCR8P51685 355 aa13.19□□□□□ -0.3
SPTLC2-202ENST00000554365 ADNP2Q6IQ32 1131 aa13.19□□□□□ -0.3
SPTLC2-202ENST00000554365 MRGPRGQ86SM5 289 aa13.19□□□□□ -0.3
SPTLC2-202ENST00000554365 LAS2Q8IYD9 372 aa13.19□□□□□ -0.3
SPTLC2-202ENST00000554365 CLYBLQ8N0X4 340 aa13.19□□□□□ -0.3
SPTLC2-202ENST00000554365 SUN3Q8TAQ9 357 aa13.19□□□□□ -0.3
SPTLC2-202ENST00000554365 WDR20Q8TBZ3 569 aa13.19□□□□□ -0.3
SPTLC2-202ENST00000554365 PIWIL2Q8TC59 973 aaKnown RBP13.19□□□□□ -0.3
SPTLC2-202ENST00000554365 CCDC120Q96HB5 630 aa13.19□□□□□ -0.3
SPTLC2-202ENST00000554365 PLCD4Q9BRC7 762 aa13.19□□□□□ -0.3
SPTLC2-202ENST00000554365 EFCAB11Q9BUY7 163 aa13.19□□□□□ -0.3
SPTLC2-202ENST00000554365 SARGQ9BW04 601 aa13.19□□□□□ -0.3
SPTLC2-202ENST00000554365 RIC8BQ9NVN3 520 aa13.19□□□□□ -0.3
SPTLC2-202ENST00000554365 SEC14L3Q9UDX4 400 aa13.19□□□□□ -0.3
SPTLC2-202ENST00000554365 MRPS2Q9Y399 296 aaKnown RBP13.19□□□□□ -0.3
SPTLC2-202ENST00000554365 ZGRF1Q86YA3 2104 aa13.19□□□□□ -0.3
SPTLC2-202ENST00000554365 H0YGG7 62 aa13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 H0YIV9 168 aa13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 MANBAO00462 879 aa13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 HAT1O14929 419 aa13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 LCMT2O60294 686 aaKnown RBP13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 TGDSO95455 350 aa13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 WDPCPO95876 746 aa13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 CRYABP02511 175 aaKnown RBP13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 COX6B1P14854 86 aa13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 HRH2P25021 359 aa13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 MST1P26927 711 aa13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 HTR1EP28566 365 aa13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 ARF3P61204 181 aaPredicted RBP13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 DSG2Q14126 1118 aa13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 CPSF6Q16630 551 aaKnown RBP eCLIP13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 PRTGQ2VWP7 1150 aa13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 FBXO42Q6P3S6 717 aa13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 RNF165Q6ZSG1 346 aa13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 GDF7Q7Z4P5 450 aa13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 VN1R5Q7Z5H4 357 aa13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 WDR75Q8IWA0 830 aaKnown RBP13.18□□□□□ -0.3
SPTLC2-202ENST00000554365 ANKRD53Q8N9V6 530 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms