RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 ARHGEF39Q8N4T4 335 aa7.26□□□□□ -1.25
ABCD4-220ENST00000553998 METTL27Q8N6F8 245 aaPredicted RBP7.26□□□□□ -1.25
ABCD4-220ENST00000553998 TEX9Q8N6V9 391 aa7.26□□□□□ -1.25
ABCD4-220ENST00000553998 SNX31Q8N9S9 440 aa7.26□□□□□ -1.25
ABCD4-220ENST00000553998 CCDC63Q8NA47 563 aa7.26□□□□□ -1.25
ABCD4-220ENST00000553998 LILRB4Q8NHJ6 448 aa7.26□□□□□ -1.25
ABCD4-220ENST00000553998 TCP10LQ8TDR4 215 aa7.26□□□□□ -1.25
ABCD4-220ENST00000553998 CA5BP1Q8WTZ4 195 aa7.26□□□□□ -1.25
ABCD4-220ENST00000553998 SREK1Q8WXA9 508 aaKnown RBP7.26□□□□□ -1.25
ABCD4-220ENST00000553998 NEIL2Q969S2 332 aa7.26□□□□□ -1.25
ABCD4-220ENST00000553998 ESAMQ96AP7 390 aa7.26□□□□□ -1.25
ABCD4-220ENST00000553998 PHF21BQ96EK2 531 aa7.26□□□□□ -1.25
ABCD4-220ENST00000553998 SEC16BQ96JE7 1060 aa7.26□□□□□ -1.25
ABCD4-220ENST00000553998 ZNF354BQ96LW1 612 aa7.26□□□□□ -1.25
ABCD4-220ENST00000553998 C10orf90Q96M02 699 aa7.26□□□□□ -1.25
ABCD4-220ENST00000553998 FRMD6Q96NE9 622 aa7.26□□□□□ -1.25
ABCD4-220ENST00000553998 PRAP1Q96NZ9 151 aa7.26□□□□□ -1.25
ABCD4-220ENST00000553998 ZFYVE21Q9BQ24 234 aa7.26□□□□□ -1.25
ABCD4-220ENST00000553998 AIF1LQ9BQI0 150 aa7.26□□□□□ -1.25
ABCD4-220ENST00000553998 EFCAB11Q9BUY7 163 aa7.26□□□□□ -1.25
ABCD4-220ENST00000553998 ERVK-6Q9BXR3 956 aa7.26□□□□□ -1.25
ABCD4-220ENST00000553998 NT5DC2Q9H857 520 aa7.26□□□□□ -1.25
ABCD4-220ENST00000553998 MKKSQ9NPJ1 570 aaPredicted RBP7.26□□□□□ -1.25
ABCD4-220ENST00000553998 NPDC1Q9NQX5 325 aaPredicted RBP7.26□□□□□ -1.25
ABCD4-220ENST00000553998 ABCF3Q9NUQ8 709 aa7.26□□□□□ -1.25
ABCD4-220ENST00000553998 CDC14AQ9UNH5 594 aa7.26□□□□□ -1.25
ABCD4-220ENST00000553998 STK38LQ9Y2H1 464 aa7.26□□□□□ -1.25
ABCD4-220ENST00000553998 ASB1Q9Y576 335 aa7.26□□□□□ -1.25
ABCD4-220ENST00000553998 ACANP16112 2415 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 TRBC2A0A5B9 178 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 HMGB1P1B2RPK0 211 aaPredicted RBP7.25□□□□□ -1.25
ABCD4-220ENST00000553998 NPIPA5E9PKD4 350 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 H3BQF6 201 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 TXNDC9O14530 226 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 TRIM13O60858 407 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 SPAG7O75391 227 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 SASH3O75995 380 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 TOXO94900 526 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 SIX3O95343 332 aaPredicted RBP7.25□□□□□ -1.25
ABCD4-220ENST00000553998 HEXBP07686 556 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 HOXD4P09016 255 aaPredicted RBP7.25□□□□□ -1.25
ABCD4-220ENST00000553998 CREB1P16220 341 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 EPORP19235 508 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 FBLP22087 321 aaKnown RBP7.25□□□□□ -1.25
ABCD4-220ENST00000553998 MSX1P28360 303 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 SERPINB1P30740 379 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 CD96P40200 585 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 HNF4AP41235 474 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 ETV4P43268 484 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 EFNA3P52797 238 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 MAGOHP61326 146 aaKnown RBP7.25□□□□□ -1.25
ABCD4-220ENST00000553998 YBX1P67809 324 aaKnown RBP7.25□□□□□ -1.25
ABCD4-220ENST00000553998 REEP5Q00765 189 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 IRF8Q02556 426 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 EEF1A2Q05639 463 aaKnown RBP7.25□□□□□ -1.25
ABCD4-220ENST00000553998 ZNF33BQ06732 778 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 LAPTM5Q13571 262 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 TUBA3CQ13748 450 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 GTF2H2Q13888 395 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 FBXO48Q5FWF7 155 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 ACER2Q5QJU3 275 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 ZNF678Q5SXM1 525 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 CATSPEREQ5SY80 951 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 C10orf62Q5T681 223 aaPredicted RBP7.25□□□□□ -1.25
ABCD4-220ENST00000553998 GARNL3Q5VVW2 1013 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 LIPMQ5VYY2 423 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 LIPJQ5W064 366 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 PLAG1Q6DJT9 500 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 GTF2H2CQ6P1K8 395 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 TUBA3EQ6PEY2 450 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 GOLGA7Q7Z5G4 137 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 FGD2Q7Z6J4 655 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 TMPRSS11BQ86T26 416 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 PRSS58Q8IYP2 241 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 KRT78Q8N1N4 520 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 AMER2Q8N7J2 671 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 AMER3Q8N944 861 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 MFSD9Q8NBP5 474 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 ARMC2Q8NEN0 867 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 TTLQ8NG68 377 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 ZNF483Q8TF39 744 aaPredicted RBP7.25□□□□□ -1.25
ABCD4-220ENST00000553998 ASB5Q8WWX0 329 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 UBE2E3Q969T4 207 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 SDCCAG3Q96C92 435 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 L3HYPDHQ96EM0 354 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 PTCD3Q96EY7 689 aaKnown RBP7.25□□□□□ -1.25
ABCD4-220ENST00000553998 ATP6V1G3Q96LB4 118 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 SIGLEC12Q96PQ1 595 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 FAM111AQ96PZ2 611 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 TMEM237Q96Q45 408 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 OR2A5Q96R48 311 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 NPAS2Q99743 824 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 TRMOQ9BU70 441 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 NTMT1Q9BV86 223 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 IPPKQ9H8X2 491 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 SLC24A3Q9HC58 644 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 OXSMQ9NWU1 459 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 COQ3Q9NZJ6 369 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 SLC17A7Q9P2U7 560 aa7.25□□□□□ -1.25
ABCD4-220ENST00000553998 PCTPQ9UKL6 214 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms