RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 SLC22A16Q86VW1 577 aa9.23□□□□□ -0.93
ACTN1-208ENST00000553370 GPALPP1Q8IXQ4 340 aa9.23□□□□□ -0.93
ACTN1-208ENST00000553370 KLHDC8AQ8IYD2 350 aa9.23□□□□□ -0.93
ACTN1-208ENST00000553370 TMEM132CQ8N3T6 1108 aa9.23□□□□□ -0.93
ACTN1-208ENST00000553370 ANKRD53Q8N9V6 530 aa9.23□□□□□ -0.93
ACTN1-208ENST00000553370 PSD4Q8NDX1 1056 aa9.23□□□□□ -0.93
ACTN1-208ENST00000553370 EPS8L3Q8TE67 593 aaKnown RBP9.23□□□□□ -0.93
ACTN1-208ENST00000553370 CREB3L4Q8TEY5 395 aa9.23□□□□□ -0.93
ACTN1-208ENST00000553370 HPS1Q92902 700 aa9.23□□□□□ -0.93
ACTN1-208ENST00000553370 DAZLQ92904 295 aaKnown RBP9.23□□□□□ -0.93
ACTN1-208ENST00000553370 RUNDC3BQ96NL0 473 aa9.23□□□□□ -0.93
ACTN1-208ENST00000553370 LDAHQ9H6V9 325 aa9.23□□□□□ -0.93
ACTN1-208ENST00000553370 CNOT10Q9H9A5 744 aaKnown RBP9.23□□□□□ -0.93
ACTN1-208ENST00000553370 COPS7AQ9UBW8 275 aa9.23□□□□□ -0.93
ACTN1-208ENST00000553370 RNF6Q9Y252 685 aa9.23□□□□□ -0.93
ACTN1-208ENST00000553370 NIPBLQ6KC79 2804 aaeCLIP9.23□□□□□ -0.93
ACTN1-208ENST00000553370 FLNAP21333 2647 aaKnown RBP9.23□□□□□ -0.93
ACTN1-208ENST00000553370 ACANP16112 2415 aa9.23□□□□□ -0.93
ACTN1-208ENST00000553370 DOCK7Q96N67 2140 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 ZFHX3Q15911 3703 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 IGKV3D-11A0A0A0MRZ8 115 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 FIGNL2A6NMB9 653 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 NPIPA2E9PIF3 369 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 NPIPA3F8WFD2 350 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 G3V3Y1 287 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 WWP2O00308 870 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 DYRK3O43781 588 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 C1GALT1C1LP0DN25 315 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 CD1EP15812 388 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 CERS1P27544 350 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 GSTM2P28161 218 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 PPP2R1BP30154 601 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 KRTAP10-9P60411 292 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 MGAT5Q09328 741 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 PMPCAQ10713 525 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 ZNF460Q14592 562 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 MORF4L2Q15014 288 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 ELAVL1Q15717 326 aaKnown RBP9.22□□□□□ -0.93
ACTN1-208ENST00000553370 HIST2H2ACQ16777 129 aaPredicted RBP9.22□□□□□ -0.93
ACTN1-208ENST00000553370 CMPK2Q5EBM0 449 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 CES4AQ5XG92 561 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 HIST2H2AA3Q6FI13 130 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 ZNF585AQ6P3V2 769 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 SBSNQ6UWP8 590 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 MDGA2Q7Z553 956 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 FGD2Q7Z6J4 655 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 CCDC71Q8IV32 467 aaPredicted RBP9.22□□□□□ -0.93
ACTN1-208ENST00000553370 KLHL7Q8IXQ5 586 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 ZNF595Q8IYB9 648 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 CLYBLQ8N0X4 340 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 SLC35F6Q8N357 371 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 TCAIMQ8N3R3 496 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 ZFP62Q8NB50 900 aaPredicted RBP9.22□□□□□ -0.93
ACTN1-208ENST00000553370 APCDD1LQ8NCL9 501 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 NFAM1Q8NET5 270 aaPredicted RBP9.22□□□□□ -0.93
ACTN1-208ENST00000553370 OR52N2Q8NGI0 321 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 OR5M9Q8NGP3 310 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 OR14A16Q8NHC5 309 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 ACTRT1Q8TDG2 376 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 EXT2Q93063 718 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 CAPZA3Q96KX2 299 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 SMC6Q96SB8 1091 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 NPLQ9BXD5 320 aaPredicted RBP9.22□□□□□ -0.93
ACTN1-208ENST00000553370 OR8D2Q9GZM6 311 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 REXO4Q9GZR2 422 aaKnown RBP9.22□□□□□ -0.93
ACTN1-208ENST00000553370 TRIM45Q9H8W5 580 aaPredicted RBP9.22□□□□□ -0.93
ACTN1-208ENST00000553370 NSMCE4AQ9NXX6 385 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 OARD1Q9Y530 152 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 NF1P21359 2839 aa9.22□□□□□ -0.93
ACTN1-208ENST00000553370 BCKDKO14874 412 aa9.21□□□□□ -0.94
ACTN1-208ENST00000553370 ZSCAN12O43309 604 aa9.21□□□□□ -0.94
ACTN1-208ENST00000553370 NADKO95544 446 aaPredicted RBP9.21□□□□□ -0.94
ACTN1-208ENST00000553370 P04436 131 aa9.21□□□□□ -0.94
ACTN1-208ENST00000553370 HNRNPH1P31943 449 aaKnown RBP9.21□□□□□ -0.94
ACTN1-208ENST00000553370 SOX3P41225 446 aa9.21□□□□□ -0.94
ACTN1-208ENST00000553370 ART1P52961 327 aa9.21□□□□□ -0.94
ACTN1-208ENST00000553370 MTTPP55157 894 aa9.21□□□□□ -0.94
ACTN1-208ENST00000553370 CDKL1Q00532 357 aa9.21□□□□□ -0.94
ACTN1-208ENST00000553370 DR1Q01658 176 aa9.21□□□□□ -0.94
ACTN1-208ENST00000553370 EFTUD2Q15029 972 aaKnown RBP eCLIP9.21□□□□□ -0.943e-6■■■■□ 19.4
ACTN1-208ENST00000553370 TSNQ15631 228 aaKnown RBP9.21□□□□□ -0.94
ACTN1-208ENST00000553370 PPP1R3AQ16821 1122 aa9.21□□□□□ -0.94
ACTN1-208ENST00000553370 XKR6Q5GH73 641 aa9.21□□□□□ -0.94
ACTN1-208ENST00000553370 PAGE2BQ5JRK9 111 aa9.21□□□□□ -0.94
ACTN1-208ENST00000553370 NDUFAF5Q5TEU4 345 aa9.21□□□□□ -0.94
ACTN1-208ENST00000553370 TRMT10BQ6PF06 316 aaKnown RBP9.21□□□□□ -0.94
ACTN1-208ENST00000553370 RTL4Q6ZR62 310 aa9.21□□□□□ -0.94
ACTN1-208ENST00000553370 RGS9BPQ6ZS82 235 aa9.21□□□□□ -0.94
ACTN1-208ENST00000553370 FAM47EQ6ZV65 393 aa9.21□□□□□ -0.94
ACTN1-208ENST00000553370 SCUBE1Q8IWY4 988 aa9.21□□□□□ -0.94
ACTN1-208ENST00000553370 MYRIPQ8NFW9 859 aa9.21□□□□□ -0.94
ACTN1-208ENST00000553370 OR2L5Q8NG80 312 aa9.21□□□□□ -0.94
ACTN1-208ENST00000553370 KIAA1191Q96A73 305 aa9.21□□□□□ -0.94
ACTN1-208ENST00000553370 LRRC39Q96DD0 335 aa9.21□□□□□ -0.94
ACTN1-208ENST00000553370 TSPAN17Q96FV3 270 aa9.21□□□□□ -0.94
ACTN1-208ENST00000553370 PDLIM5Q96HC4 596 aaKnown RBP9.21□□□□□ -0.94
ACTN1-208ENST00000553370 SEC16BQ96JE7 1060 aa9.21□□□□□ -0.94
ACTN1-208ENST00000553370 SERINC2Q96SA4 455 aa9.21□□□□□ -0.94
ACTN1-208ENST00000553370 KRT12Q99456 494 aa9.21□□□□□ -0.94
ACTN1-208ENST00000553370 CAPS2Q9BXY5 557 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms