RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 TADA1Q96BN2 335 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 REPS1Q96D71 796 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 CAPZA3Q96KX2 299 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 WFIKKN1Q96NZ8 548 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 TNFRSF13CQ96RJ3 184 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 AGPAT1Q99943 283 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 C19orf43Q9BQ61 176 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 CCDC77Q9BR77 488 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 SLC39A3Q9BRY0 314 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 MED18Q9BUE0 208 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 JAM3Q9BX67 310 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 ANGPTL4Q9BY76 406 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 MYLK2Q9H1R3 596 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 ZNF696Q9H7X3 374 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 BARX1Q9HBU1 254 aaPredicted RBP4.76□□□□□ -1.65
CKAP4-203ENST00000553039 PCDH18Q9HCL0 1135 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 ACKR4Q9NPB9 350 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 KCMF1Q9P0J7 381 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 RWDD2AQ9UIY3 292 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 MAN1B1Q9UKM7 699 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 FBXW2Q9UKT8 454 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 PLAGL1Q9UM63 463 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 RUVBL1Q9Y265 456 aaKnown RBP4.76□□□□□ -1.65
CKAP4-203ENST00000553039 WNK1Q9H4A3 2382 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 ZNF407Q9C0G0 2248 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 A0A0A6YYJ9 748 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 A0A0A6YYK5 440 aaPredicted RBP4.75□□□□□ -1.65
CKAP4-203ENST00000553039 CD8B2A6NJW9 211 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 DEFB108AA8MXU0 73 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 SLCO1B7G3V0H7 640 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 SCDO00767 359 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 BUD23O43709 281 aaKnown RBP4.75□□□□□ -1.65
CKAP4-203ENST00000553039 NPHS1O60500 1241 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 B4GALT2O60909 372 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 ZFAND5O76080 213 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 NSA2O95478 260 aaKnown RBP4.75□□□□□ -1.65
CKAP4-203ENST00000553039 CBX7O95931 251 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 FESP07332 822 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 CRYGSP22914 178 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 JAK1P23458 1154 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 DEKP35659 375 aaKnown RBP4.75□□□□□ -1.65
CKAP4-203ENST00000553039 ARHGAP25P42331 645 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 COMPP49747 757 aaPredicted RBP4.75□□□□□ -1.65
CKAP4-203ENST00000553039 CASP9P55211 416 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 WNT3AP56704 352 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 POLR2FP61218 127 aaKnown RBP4.75□□□□□ -1.65
CKAP4-203ENST00000553039 RPS4XP62701 263 aaKnown RBP4.75□□□□□ -1.65
CKAP4-203ENST00000553039 MAT1AQ00266 395 aaKnown RBP4.75□□□□□ -1.65
CKAP4-203ENST00000553039 PDK1Q15118 436 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 PDK2Q15119 407 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 CNN3Q15417 329 aaKnown RBP4.75□□□□□ -1.65
CKAP4-203ENST00000553039 TAF1AQ15573 450 aaPredicted RBP4.75□□□□□ -1.65
CKAP4-203ENST00000553039 PHKG1Q16816 387 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 SYTL3Q4VX76 610 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 MIDNQ504T8 468 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 TEX44Q53QW1 395 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 SIRPB2Q5JXA9 342 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 FAM47EQ6ZV65 393 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 ESPNLQ6ZVH7 1005 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 CYP4V2Q6ZWL3 525 aaPredicted RBP4.75□□□□□ -1.65
CKAP4-203ENST00000553039 RNF44Q7L0R7 432 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 BZW1Q7L1Q6 419 aaKnown RBP4.75□□□□□ -1.65
CKAP4-203ENST00000553039 AGGF1Q8N302 714 aaeCLIP4.75□□□□□ -1.65
CKAP4-203ENST00000553039 MFSD4AQ8N468 514 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 LRRC17Q8N6Y2 441 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 ZNF611Q8N823 705 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 LINC01555Q8NAE3 123 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 NAXEQ8NCW5 288 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 OR2L3Q8NG85 312 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 OR4K2Q8NGD2 314 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 SPATA22Q8NHS9 363 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 CFAP61Q8NHU2 1237 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 GSDMBQ8TAX9 411 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 FBLIM1Q8WUP2 373 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 ASZ1Q8WWH4 475 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 ASB15Q8WXK1 588 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 GCDHQ92947 438 aaPredicted RBP4.75□□□□□ -1.65
CKAP4-203ENST00000553039 ARL8AQ96BM9 186 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 APIPQ96GX9 242 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 ZFP3Q96NJ6 502 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 OR1F2PQ96R84 312 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 DPH7Q9BTV6 452 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 SFXN3Q9BWM7 321 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 MAK16Q9BXY0 300 aaKnown RBP4.75□□□□□ -1.65
CKAP4-203ENST00000553039 TSPY26PQ9H489 355 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 GOLPH3LQ9H4A5 285 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 GLOD4Q9HC38 313 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.75□□□□□ -1.654e-6■■□□□ 11.4
CKAP4-203ENST00000553039 SACM1LQ9NTJ5 587 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 AP5S1Q9NUS5 200 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 QPCTLQ9NXS2 382 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 GPRC5BQ9NZH0 403 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 KCNS2Q9ULS6 477 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 PCDHA13Q9Y5I0 950 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 ATP23Q9Y6H3 246 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 MEGF8Q7Z7M0 2845 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 NUP210LQ5VU65 1888 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 VPS13CQ709C8 3753 aa4.75□□□□□ -1.65
CKAP4-203ENST00000553039 SCN2AQ99250 2005 aa4.74□□□□□ -1.65
CKAP4-203ENST00000553039 A0A088AWK7 358 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms