RNA–Protein interactions for RNA: ENST00000552823.5

LIMA1-215, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-215ENST00000552823 RP1P56715 2156 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 TRBV5-3A0A0A0MS03 114 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 ANHXE9PGG2 379 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 QSOX1O00391 747 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 SLC16A5O15375 505 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 EGFP01133 1207 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 COL9A1P20849 921 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 DNAJA1P31689 397 aaKnown RBP5.33□□□□□ -1.56
LIMA1-215ENST00000552823 CCT3P49368 545 aaKnown RBP5.33□□□□□ -1.56
LIMA1-215ENST00000552823 HLCSP50747 726 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 CRISP3P54108 245 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 DSTNP60981 165 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 EMX1Q04741 257 aaPredicted RBP5.33□□□□□ -1.56
LIMA1-215ENST00000552823 ILF2Q12905 390 aaKnown RBP5.33□□□□□ -1.56
LIMA1-215ENST00000552823 SLAMF1Q13291 335 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 DCTN2Q13561 401 aaKnown RBP5.33□□□□□ -1.56
LIMA1-215ENST00000552823 MED22Q15528 200 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 NNATQ16517 81 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 GAB4Q2WGN9 574 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 DEFB134Q4QY38 66 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 SPIN4Q56A73 249 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 TJAP1Q5JTD0 557 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 TPRG1LQ5T0D9 272 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 PIP5KL1Q5T9C9 394 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 ANKRD54Q6NXT1 300 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 TMEM107Q6UX40 140 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 PAGE2Q7Z2X7 111 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 ARHGAP22Q7Z5H3 698 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 VN1R5Q7Z5H4 357 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 PARGQ86W56 976 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 DCUN1D3Q8IWE4 304 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 TRIM48Q8IWZ4 208 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 OR52E1Q8NGJ3 308 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 OR2L2Q8NH16 312 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 DNASE1L2Q92874 299 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 TMEM203Q969S6 136 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 REPS1Q96D71 796 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 ZG16BQ96DA0 208 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 OTUB2Q96DC9 234 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 DUS3LQ96G46 650 aaKnown RBP5.33□□□□□ -1.56
LIMA1-215ENST00000552823 ART5Q96L15 291 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 CAMK1GQ96NX5 476 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 CSF3RQ99062 836 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 YIPF2Q9BWQ6 316 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 ALOXE3Q9BYJ1 711 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 TPSD1Q9BZJ3 242 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 TMEM168Q9H0V1 697 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 MUC13Q9H3R2 512 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 MRPS30Q9NP92 439 aaKnown RBP5.33□□□□□ -1.56
LIMA1-215ENST00000552823 IL1RAPQ9NPH3 570 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 GIN1Q9NXP7 522 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 GALNT8Q9NY28 637 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 SEC14L3Q9UDX4 400 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 CACNA1GO43497 2377 aa5.33□□□□□ -1.56
LIMA1-215ENST00000552823 PLXND1Q9Y4D7 1925 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 CLDN24A6NM45 220 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 H0YIV9 168 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 KPNA4O00629 521 aaPredicted RBP5.32□□□□□ -1.56
LIMA1-215ENST00000552823 PDPK1O15530 556 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 AP1G1O43747 822 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 PCDHGA12O60330 932 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 GADD45GO95257 159 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 PAPLNO95428 1278 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 NPPAP01160 153 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 HNRNPCP07910 306 aaKnown RBP eCLIP5.32□□□□□ -1.56
LIMA1-215ENST00000552823 HTR1AP08908 422 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 FURINP09958 794 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 IL1RNP18510 177 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 FPR1P21462 350 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 AVPR1BP47901 424 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 SEPHS1P49903 392 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 GZMMP51124 257 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 CCR8P51685 355 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 ISL1P61371 349 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 MXD1Q05195 221 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 NPRL3Q12980 569 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 AQP6Q13520 282 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 ITPRIPL2Q3MIP1 535 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 IFI44LQ53G44 452 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 TOR1AIP1Q5JTV8 583 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 LRIF1Q5T3J3 769 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 CCNJQ5T5M9 372 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 DEPDC1Q5TB30 811 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 LAIR2Q6ISS4 152 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 TRIM40Q6P9F5 258 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 SYCE2Q6PIF2 218 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 ZNF773Q6PK81 442 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 MTSS1LQ765P7 747 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 EIF3MQ7L2H7 374 aaKnown RBP5.32□□□□□ -1.56
LIMA1-215ENST00000552823 SLC9B2Q86UD5 537 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 SLCO6A1Q86UG4 719 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 GPR65Q8IYL9 337 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 NDNFQ8TB73 568 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 HERVK_113Q902F9 699 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 TESCQ96BS2 214 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 OR52A5Q9H2C5 316 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 TCEAL2Q9H3H9 227 aaPredicted RBP5.32□□□□□ -1.56
LIMA1-215ENST00000552823 DPEP2Q9H4A9 486 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 CD320Q9NPF0 282 aa5.32□□□□□ -1.56
LIMA1-215ENST00000552823 ADAP2Q9NPF8 381 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms