RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 BUD31P41223 144 aaPredicted RBP17.34■□□□□ 0.37
PRPF40B-216ENST00000552301 STX4Q12846 297 aa17.34■□□□□ 0.37
PRPF40B-216ENST00000552301 CRB2Q5IJ48 1285 aa17.34■□□□□ 0.37
PRPF40B-216ENST00000552301 ISLR2Q6UXK2 745 aa17.34■□□□□ 0.37
PRPF40B-216ENST00000552301 PAGE2Q7Z2X7 111 aa17.34■□□□□ 0.37
PRPF40B-216ENST00000552301 CNTRLQ7Z7A1 2325 aa17.34■□□□□ 0.37
PRPF40B-216ENST00000552301 CLNKQ7Z7G1 428 aa17.34■□□□□ 0.37
PRPF40B-216ENST00000552301 SCUBE1Q8IWY4 988 aa17.34■□□□□ 0.37
PRPF40B-216ENST00000552301 ZIM3Q96PE6 472 aa17.34■□□□□ 0.37
PRPF40B-216ENST00000552301 WDR41Q9HAD4 459 aa17.34■□□□□ 0.37
PRPF40B-216ENST00000552301 BRF2Q9HAW0 419 aa17.34■□□□□ 0.37
PRPF40B-216ENST00000552301 NECTIN3Q9NQS3 549 aa17.34■□□□□ 0.37
PRPF40B-216ENST00000552301 PTGFRNQ9P2B2 879 aa17.34■□□□□ 0.37
PRPF40B-216ENST00000552301 TEKT2Q9UIF3 430 aa17.34■□□□□ 0.37
PRPF40B-216ENST00000552301 A8MUA0 341 aa17.33■□□□□ 0.36
PRPF40B-216ENST00000552301 MANBAO00462 879 aa17.33■□□□□ 0.36
PRPF40B-216ENST00000552301 CYR61O00622 381 aa17.33■□□□□ 0.36
PRPF40B-216ENST00000552301 TRIM13O60858 407 aa17.33■□□□□ 0.36
PRPF40B-216ENST00000552301 ULK1O75385 1050 aa17.33■□□□□ 0.36
PRPF40B-216ENST00000552301 ESRRBO95718 433 aa17.33■□□□□ 0.36
PRPF40B-216ENST00000552301 PDYNP01213 254 aa17.33■□□□□ 0.36
PRPF40B-216ENST00000552301 ITGAMP11215 1152 aa17.33■□□□□ 0.36
PRPF40B-216ENST00000552301 HSD3B1P14060 373 aa17.33■□□□□ 0.36
PRPF40B-216ENST00000552301 HSD3B2P26439 372 aa17.33■□□□□ 0.36
PRPF40B-216ENST00000552301 HNRNPFP52597 415 aaKnown RBP17.33■□□□□ 0.36
PRPF40B-216ENST00000552301 TAS2R50P59544 299 aa17.33■□□□□ 0.36
PRPF40B-216ENST00000552301 LINC00696Q6ZRV3 163 aa17.33■□□□□ 0.36
PRPF40B-216ENST00000552301 FRMD7Q6ZUT3 714 aa17.33■□□□□ 0.36
PRPF40B-216ENST00000552301 GPR180Q86V85 440 aa17.33■□□□□ 0.36
PRPF40B-216ENST00000552301 C10orf107Q8IVU9 208 aa17.33■□□□□ 0.36
PRPF40B-216ENST00000552301 SIRT6Q8N6T7 355 aa17.33■□□□□ 0.36
PRPF40B-216ENST00000552301 TCP10LQ8TDR4 215 aa17.33■□□□□ 0.36
PRPF40B-216ENST00000552301 AGAP11Q8TF27 550 aa17.33■□□□□ 0.36
PRPF40B-216ENST00000552301 HBEGFQ99075 208 aa17.33■□□□□ 0.36
PRPF40B-216ENST00000552301 WDR77Q9BQA1 342 aaPredicted RBP17.33■□□□□ 0.36
PRPF40B-216ENST00000552301 MFRPQ9BY79 579 aa17.33■□□□□ 0.36
PRPF40B-216ENST00000552301 KCNK13Q9HB14 408 aa17.33■□□□□ 0.36
PRPF40B-216ENST00000552301 PNO1Q9NRX1 252 aaKnown RBP17.33■□□□□ 0.36
PRPF40B-216ENST00000552301 FARSBQ9NSD9 589 aaKnown RBP17.33■□□□□ 0.36
PRPF40B-216ENST00000552301 KCMF1Q9P0J7 381 aa17.33■□□□□ 0.36
PRPF40B-216ENST00000552301 ZNF225Q9UK10 706 aa17.33■□□□□ 0.36
PRPF40B-216ENST00000552301 A0A0A6YYD5 115 aa17.32■□□□□ 0.36
PRPF40B-216ENST00000552301 SAGE2PA6NJ88 616 aa17.32■□□□□ 0.36
PRPF40B-216ENST00000552301 SUV39H1O43463 412 aa17.32■□□□□ 0.36
PRPF40B-216ENST00000552301 CTNSO60931 367 aa17.32■□□□□ 0.36
PRPF40B-216ENST00000552301 EEDO75530 441 aaKnown RBP17.32■□□□□ 0.36
PRPF40B-216ENST00000552301 IFNA16P05015 189 aa17.32■□□□□ 0.36
PRPF40B-216ENST00000552301 PPP2R1BP30154 601 aa17.32■□□□□ 0.36
PRPF40B-216ENST00000552301 BSGP35613 385 aa17.32■□□□□ 0.36
PRPF40B-216ENST00000552301 CASRP41180 1078 aa17.32■□□□□ 0.36
PRPF40B-216ENST00000552301 SLC26A5P58743 744 aa17.32■□□□□ 0.36
PRPF40B-216ENST00000552301 TNFRSF17Q02223 184 aa17.32■□□□□ 0.36
PRPF40B-216ENST00000552301 MFAP5Q13361 173 aa17.32■□□□□ 0.36
PRPF40B-216ENST00000552301 SERTAD2Q14140 314 aa17.32■□□□□ 0.36
PRPF40B-216ENST00000552301 PCLAFQ15004 111 aa17.32■□□□□ 0.36
PRPF40B-216ENST00000552301 NADK2Q4G0N4 442 aa17.32■□□□□ 0.36
PRPF40B-216ENST00000552301 COLEC12Q5KU26 742 aa17.32■□□□□ 0.36
PRPF40B-216ENST00000552301 TCHHL1Q5QJ38 904 aaPredicted RBP17.32■□□□□ 0.36
PRPF40B-216ENST00000552301 ABHD17BQ5VST6 288 aa17.32■□□□□ 0.36
PRPF40B-216ENST00000552301 LRIG3Q6UXM1 1119 aa17.32■□□□□ 0.36
PRPF40B-216ENST00000552301 IQCKQ8N0W5 287 aa17.32■□□□□ 0.36
PRPF40B-216ENST00000552301 TMEM52Q8NDY8 209 aa17.32■□□□□ 0.36
PRPF40B-216ENST00000552301 C7orf57Q8NEG2 295 aa17.32■□□□□ 0.36
PRPF40B-216ENST00000552301 M1APQ8TC57 530 aa17.32■□□□□ 0.36
PRPF40B-216ENST00000552301 MRPL1Q9BYD6 325 aaKnown RBP17.32■□□□□ 0.36
PRPF40B-216ENST00000552301 DDX31Q9H8H2 851 aaKnown RBP17.32■□□□□ 0.36
PRPF40B-216ENST00000552301 MMP25Q9NPA2 562 aa17.32■□□□□ 0.36
PRPF40B-216ENST00000552301 ADAP2Q9NPF8 381 aa17.32■□□□□ 0.36
PRPF40B-216ENST00000552301 SLC17A7Q9P2U7 560 aa17.32■□□□□ 0.36
PRPF40B-216ENST00000552301 DYTNA2CJ06 578 aa17.31■□□□□ 0.36
PRPF40B-216ENST00000552301 A8MUI8 341 aa17.31■□□□□ 0.36
PRPF40B-216ENST00000552301 MYO1DO94832 1006 aa17.31■□□□□ 0.36
PRPF40B-216ENST00000552301 FAM58BPP0C7Q3 252 aa17.31■□□□□ 0.36
PRPF40B-216ENST00000552301 NR2F6P10588 404 aa17.31■□□□□ 0.36
PRPF40B-216ENST00000552301 HNRNPH2P55795 449 aaKnown RBP17.31■□□□□ 0.36
PRPF40B-216ENST00000552301 ZNF33BQ06732 778 aa17.31■□□□□ 0.36
PRPF40B-216ENST00000552301 CSTF3Q12996 717 aaKnown RBP17.31■□□□□ 0.36
PRPF40B-216ENST00000552301 IGFL3Q6UXB1 125 aa17.31■□□□□ 0.36
PRPF40B-216ENST00000552301 RBMXL3Q8N7X1 1067 aaKnown RBP17.31■□□□□ 0.36
PRPF40B-216ENST00000552301 GBP7Q8N8V2 638 aaPredicted RBP17.31■□□□□ 0.36
PRPF40B-216ENST00000552301 CNDP1Q96KN2 507 aa17.31■□□□□ 0.36
PRPF40B-216ENST00000552301 LMF1Q96S06 567 aa17.31■□□□□ 0.36
PRPF40B-216ENST00000552301 ZNF717Q9BY31 904 aaPredicted RBP17.31■□□□□ 0.36
PRPF40B-216ENST00000552301 ILKAPQ9H0C8 392 aaPredicted RBP17.31■□□□□ 0.36
PRPF40B-216ENST00000552301 STMN4Q9H169 189 aaPredicted RBP17.31■□□□□ 0.36
PRPF40B-216ENST00000552301 RPF2Q9H7B2 306 aaKnown RBP17.31■□□□□ 0.36
PRPF40B-216ENST00000552301 SLAMF7Q9NQ25 335 aa17.31■□□□□ 0.36
PRPF40B-216ENST00000552301 VPS29Q9UBQ0 182 aa17.31■□□□□ 0.36
PRPF40B-216ENST00000552301 ADAM29Q9UKF5 820 aa17.31■□□□□ 0.36
PRPF40B-216ENST00000552301 TIMM22Q9Y584 194 aa17.31■□□□□ 0.36
PRPF40B-216ENST00000552301 GOLGA6L10A6NI86 522 aa17.3■□□□□ 0.36
PRPF40B-216ENST00000552301 CTIFO43310 598 aaKnown RBP17.3■□□□□ 0.36
PRPF40B-216ENST00000552301 TMPRSS11DO60235 418 aa17.3■□□□□ 0.36
PRPF40B-216ENST00000552301 LDB3O75112 727 aa17.3■□□□□ 0.36
PRPF40B-216ENST00000552301 GUCY1B2O75343 617 aa17.3■□□□□ 0.36
PRPF40B-216ENST00000552301 GBAP04062 536 aa17.3■□□□□ 0.36
PRPF40B-216ENST00000552301 KLK1P06870 262 aa17.3■□□□□ 0.36
PRPF40B-216ENST00000552301 MAPK12P53778 367 aa17.3■□□□□ 0.36
PRPF40B-216ENST00000552301 ARG2P78540 354 aa17.3■□□□□ 0.36
PRPF40B-216ENST00000552301 TERF2Q15554 542 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms