RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 FCER2P06734 321 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 SPATA31D3P0C874 917 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 SMPD1P17405 629 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 SNTA1Q13424 505 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 PRAMEF14Q5SWL7 426 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 PRAMEF13Q5VWM6 474 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 SPATA31D4Q6ZUB0 917 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 C7orf61Q8IZ16 206 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 CRTAC1Q9NQ79 661 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 TMEM45AQ9NWC5 275 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 SOHLH2Q9NX45 425 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 TEX13CA0A0J9YWL9 993 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 BMP4P12644 408 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 ATP1B2P14415 290 aaPredicted RBP15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 HTR1BP28222 390 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 CSKP41240 450 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 VLDLRP98155 873 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 GPR68Q15743 365 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 GTDC1Q4AE62 458 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 CDKL4Q5MAI5 379 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 C1orf189Q5VU69 101 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 SYNPOQ8N3V7 929 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 NR4A3Q92570 626 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 SCP2D1Q9UJQ7 156 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 PKD1L3Q7Z443 1732 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 C13orf42A0A1B0GVH6 325 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 F5H0A9 414 aaPredicted RBP15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 CREBL2O60519 120 aaPredicted RBP15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 MAFKO60675 156 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 AOC2O75106 756 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 BMP8BP34820 402 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 CNR2P34972 360 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 MLLT10P55197 1068 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 SLC35F1Q5T1Q4 408 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 FAM198BQ6UWH4 519 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 BMP8AQ7Z5Y6 402 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 CEACAM19Q7Z692 300 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 NXPE2Q96DL1 559 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 HSPA12BQ96MM6 686 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 PLEKHA6Q9Y2H5 1048 aa15.2■□□□□ 0.02
RBFOX1-212ENST00000550418 GRXCR2A6NFK2 248 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 PAHP00439 452 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 CTNNB1P35222 781 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 RPL35P42766 123 aaKnown RBP15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 SCAPQ12770 1279 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 FUT10Q6P4F1 479 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 CHST9Q7L1S5 443 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 GNPDA2Q8TDQ7 276 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 NEK7Q8TDX7 302 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 AIFM2Q9BRQ8 373 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 METTL8Q9H825 291 aaKnown RBP15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 GON4LQ3T8J9 2241 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 PRNPP04156 253 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 PVALBP20472 110 aaPredicted RBP15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 CCR8P51685 355 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 NHSL2Q5HYW2 709 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 NPWQ8N729 165 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 ZFP41Q8N8Y5 198 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 GALNT11Q8NCW6 608 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 OR5H6Q8NGV6 325 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 ZNF514Q96K75 400 aaPredicted RBP15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 OR2AG1Q9H205 316 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 ACOT13Q9NPJ3 140 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 NLGN3Q9NZ94 848 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 TAF1P21675 1872 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 CD8B2A6NJW9 211 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 AGR2O95994 175 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 CD8BP10966 210 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 FAM189BP81408 668 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 MLLT1Q03111 559 aaPredicted RBP15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 TRAM1Q15629 374 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 MUL1Q969V5 352 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 DCAF13Q9NV06 445 aaKnown RBP15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 GNG8Q9UK08 70 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 A0A1W2PQ09 198 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 LRRC72A6NJI9 287 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 KCNQ1P51787 676 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 HK3P52790 923 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 FOXA1P55317 472 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 ERVPABLB-1P60509 514 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 RAB5BP61020 215 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 TMIGD1Q6UXZ0 262 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 ZNF227Q86WZ6 799 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 GID4Q8IVV7 300 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 ARL14EPQ8N8R7 260 aaPredicted RBP15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 S100PBPQ96BU1 408 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 TMEM185BQ9H7F4 350 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 PLEKHA1Q9HB21 404 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 VAPAQ9P0L0 249 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 SH2B3Q9UQQ2 575 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 OARD1Q9Y530 152 aa15.19■□□□□ 0.02
RBFOX1-212ENST00000550418 PIRO00625 290 aa15.18■□□□□ 0.02
RBFOX1-212ENST00000550418 GATBO75879 557 aaKnown RBP15.18■□□□□ 0.02
RBFOX1-212ENST00000550418 RBBP9O75884 186 aa15.18■□□□□ 0.02
RBFOX1-212ENST00000550418 CHMP24386 653 aa15.18■□□□□ 0.02
RBFOX1-212ENST00000550418 GRK5P34947 590 aa15.18■□□□□ 0.02
RBFOX1-212ENST00000550418 SP140Q13342 867 aa15.18■□□□□ 0.02
RBFOX1-212ENST00000550418 APOFQ13790 326 aa15.18■□□□□ 0.02
RBFOX1-212ENST00000550418 PCBP2Q15366 365 aaKnown RBP eCLIP15.18■□□□□ 0.02
RBFOX1-212ENST00000550418 UMODL1-AS1Q8N2C9 162 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms