RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 ABATP80404 500 aa5.69□□□□□ -1.5
TGFBR1-208ENST00000550253 SARNPP82979 210 aaKnown RBP5.69□□□□□ -1.5
TGFBR1-208ENST00000550253 ZNF415Q09FC8 603 aa5.69□□□□□ -1.5
TGFBR1-208ENST00000550253 TRADDQ15628 312 aa5.69□□□□□ -1.5
TGFBR1-208ENST00000550253 TRIP6Q15654 476 aaKnown RBP5.69□□□□□ -1.5
TGFBR1-208ENST00000550253 SASS6Q6UVJ0 657 aa5.69□□□□□ -1.5
TGFBR1-208ENST00000550253 NIPA1Q7RTP0 329 aa5.69□□□□□ -1.5
TGFBR1-208ENST00000550253 ADAMTSL2Q86TH1 951 aa5.69□□□□□ -1.5
TGFBR1-208ENST00000550253 NUDT13Q86X67 352 aa5.69□□□□□ -1.5
TGFBR1-208ENST00000550253 PLA2G4DQ86XP0 818 aa5.69□□□□□ -1.5
TGFBR1-208ENST00000550253 PTOV1Q86YD1 416 aa5.69□□□□□ -1.5
TGFBR1-208ENST00000550253 FBXW8Q8N3Y1 598 aa5.69□□□□□ -1.5
TGFBR1-208ENST00000550253 SUMF1Q8NBK3 374 aa5.69□□□□□ -1.5
TGFBR1-208ENST00000550253 PRSS3P2Q8NHM4 247 aa5.69□□□□□ -1.5
TGFBR1-208ENST00000550253 ZNF707Q96C28 371 aaPredicted RBP5.69□□□□□ -1.5
TGFBR1-208ENST00000550253 CHFRQ96EP1 664 aa5.69□□□□□ -1.5
TGFBR1-208ENST00000550253 KCNMB3Q9NPA1 279 aa5.69□□□□□ -1.5
TGFBR1-208ENST00000550253 GKN1Q9NS71 199 aa5.69□□□□□ -1.5
TGFBR1-208ENST00000550253 KCNN3Q9UGI6 736 aa5.69□□□□□ -1.5
TGFBR1-208ENST00000550253 UBQLN2Q9UHD9 624 aa5.69□□□□□ -1.5
TGFBR1-208ENST00000550253 DNPEPQ9ULA0 475 aa5.69□□□□□ -1.5
TGFBR1-208ENST00000550253 AMDHD2Q9Y303 409 aa5.69□□□□□ -1.5
TGFBR1-208ENST00000550253 NCOR2Q9Y618 2525 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 NOTCH4Q99466 2003 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 COL4A2P08572 1712 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 ZCWPW2A0A1B0GU75 182 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 RPS10-NUDT3A0A1W2PQS6 291 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 CFAP73A6NFT4 308 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 INAFM1C9JVW0 142 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 H1F0P07305 194 aaKnown RBP5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 SP9P0CG40 484 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 GM2AP17900 193 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 JAK1P23458 1154 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 MSNP26038 577 aaKnown RBP5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 ASMTP46597 345 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 RFX2P48378 723 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 PRKCEQ02156 737 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 EEF1A2Q05639 463 aaKnown RBP5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 DSC1Q08554 894 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 RASGEF1BQ0VAM2 473 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 ZNF234Q14588 700 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 NECTIN1Q15223 517 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 UGP2Q16851 508 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 HSP90AA5PQ58FG0 334 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 ELFN2Q5R3F8 820 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 CCNYL2Q5T2Q4 361 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 ZNF770Q6IQ21 691 aaPredicted RBP5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 CCNI2Q6ZMN8 369 aaPredicted RBP5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 CFAP206Q8IYR0 622 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 TBC1D21Q8IYX1 336 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 RNF113BQ8IZP6 322 aaKnown RBP5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 Q8N1X5 172 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 C16orf52Q8NHV5 167 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 CCDC110Q8TBZ0 833 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 CCDC107Q8WV48 283 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 THOC1Q96FV9 657 aaKnown RBP5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 B3GALT6Q96L58 329 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 C3orf30Q96M34 536 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 C17orf62Q9BQA9 187 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 RPP25Q9BUL9 199 aaKnown RBP5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 PRRG4Q9BZD6 226 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 MARCH5Q9NX47 278 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 BARHL2Q9NY43 387 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 PLEKHA6Q9Y2H5 1048 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 DMRT1Q9Y5R6 373 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 HS3ST3A1Q9Y663 406 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 OTOGLQ3ZCN5 2332 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 ZZEF1O43149 2961 aa5.68□□□□□ -1.5
TGFBR1-208ENST00000550253 EP300Q09472 2414 aaPredicted RBP5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 A0A087X0K7 114 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 IGKV6-21A0A0C4DH24 114 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 IGLV5-39A0A0G2JS06 123 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 H0YHG0 523 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 MATN3O15232 486 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 MSH4O15457 936 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 PEX11AO75192 247 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 FAM106CPP0CH98 169 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 CALM1P0DP23 149 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 CALM2P0DP24 149 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 CALM3P0DP25 149 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 UGT1A6P19224 532 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 POLR2CP19387 275 aaPredicted RBP5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 CBLP22681 906 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 PAX7P23759 505 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 ISL1P61371 349 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 GALK2Q01415 458 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 SULT2A1Q06520 285 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 ZNF155Q12901 538 aaPredicted RBP5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 TSTA3Q13630 321 aaPredicted RBP5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 TMEM35AQ53FP2 167 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 OR6B2Q6IFH4 312 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 MEX3BQ6ZN04 569 aaKnown RBP5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 IL17RELQ6ZVW7 336 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 PGBD5Q8N414 524 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 ZNF548Q8NEK5 533 aaPredicted RBP5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 OR4K1Q8NGD4 311 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 SLC20A1Q8WUM9 679 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 TMEM255BQ8WV15 326 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 IRGQQ8WZA9 623 aa5.67□□□□□ -1.5
TGFBR1-208ENST00000550253 PYCR2Q96C36 320 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms