RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 SNX7Q9UNH6 387 aa10.28□□□□□ -0.76
SMARCC2-208ENST00000550150 PRKAB1Q9Y478 270 aa10.28□□□□□ -0.76
SMARCC2-208ENST00000550150 SPIN1Q9Y657 262 aaPredicted RBP10.28□□□□□ -0.76
SMARCC2-208ENST00000550150 MAU2Q9Y6X3 613 aa10.28□□□□□ -0.76
SMARCC2-208ENST00000550150 C5orf58C9J3I9 102 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 ARHGEF9O43307 516 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 TLX2O43763 284 aaPredicted RBP10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 GALK2Q01415 458 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 E2F2Q14209 437 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 C5orf22Q49AR2 442 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 GPAT3Q53EU6 434 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 GCNT6Q5T4J0 391 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 OLIG3Q7RTU3 272 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 ZNF367Q7RTV3 350 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 TSEN54Q7Z6J9 526 aaKnown RBP10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 MMP21Q8N119 569 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 SYNPOQ8N3V7 929 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 C19orf18Q8NEA5 215 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 CHAC2Q8WUX2 184 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 TMEM106CQ9BVX2 250 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 GABARAPL3Q9BY60 117 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 FAM120CQ9NX05 1096 aaKnown RBP10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 NLKQ9UBE8 527 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 HSPB11Q9Y547 144 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 SCN8AQ9UQD0 1980 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 SPEGQ15772 3267 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 A0A1W2PQ72 361 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 TMEM202A6NGA9 273 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 ANKDD1BA6NHY2 528 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 C12orf71A8MTZ7 269 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 FADS2P1A8MWK0 482 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 TLR4O00206 839 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 RGS13O14921 159 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 SCAMP2O15127 329 aaKnown RBP10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 CAPN5O15484 640 aaPredicted RBP10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 CDK6Q00534 326 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 C2orf80Q0P641 193 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 C1DQ13901 141 aaKnown RBP10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 ZNF79Q15937 498 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 DUSP7Q16829 419 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 SPOUT1Q5T280 376 aaKnown RBP10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 TRIQKQ629K1 86 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 ZNF57Q68EA5 555 aaPredicted RBP10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 PLAG1Q6DJT9 500 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 WDR53Q7Z5U6 358 aaPredicted RBP10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 THOC6Q86W42 341 aaKnown RBP10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 FRMD6Q96NE9 622 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 OPALINQ96PE5 141 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 TM9SF2Q99805 663 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 SLC22A4Q9H015 551 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 IL23AQ9NPF7 189 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 C5AR2Q9P296 337 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 DKK3Q9UBP4 350 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 TMCC3Q9ULS5 477 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 RUVBL1Q9Y265 456 aaKnown RBP10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 HCN4Q9Y3Q4 1203 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 CMAHPQ9Y471 501 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 DMDP11532 3685 aa10.27□□□□□ -0.77
SMARCC2-208ENST00000550150 TRBV4-1A0A0J9YWV2 114 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 A0A1B0GVC2 190 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 SYNDIG1LA6NDD5 238 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 ZNF840PA6NDX5 716 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 PRAMEF25A6NGN4 478 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 A6NIN4 97 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 PLOD3O60568 738 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 SCN2BO60939 215 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 IL1RNP18510 177 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 SDC2P34741 201 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 PTGER1P34995 402 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 MAGEA11P43364 429 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 CSNK1DP48730 415 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 IL18Q14116 193 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 SLC5A12Q1EHB4 618 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 BTBD16Q32M84 506 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 ZNF385BQ569K4 471 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 OR2G6Q5TZ20 316 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 TIGD4Q8IY51 512 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 YIPF7Q8N8F6 280 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 ARL14EPQ8N8R7 260 aaPredicted RBP10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 DENND6BQ8NEG7 585 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 FLCNQ8NFG4 579 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 HUS1BQ8NHY5 278 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 CRELD1Q96HD1 420 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 SNX18Q96RF0 628 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 SIGLEC11Q96RL6 698 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 CCDC32Q9BV29 185 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 SORBS1Q9BX66 1292 aaKnown RBP10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 HHATLQ9HCP6 504 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 NOTCH4Q99466 2003 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 DENND4CQ5VZ89 1909 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 FAM25AB3EWG3 89 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 FAM25CB3EWG5 89 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 FAM25GB3EWG6 89 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 CSO75390 466 aaKnown RBP10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 GCM2O75603 506 aaPredicted RBP10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 NCR1O76036 304 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 BCHEP06276 602 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 GSTM1P09488 218 aa10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 APEX1P27695 318 aaKnown RBP10.26□□□□□ -0.77
SMARCC2-208ENST00000550150 CRISP1P54107 249 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms