RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 OR5L2Q8NGL0 311 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 PTPMT1Q8WUK0 201 aaPredicted RBP9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 GAL3ST3Q96A11 431 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 MAGOHBQ96A72 148 aaKnown RBP9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 SARAFQ96BY9 339 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 SCYL1Q96KG9 808 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 TSNARE1Q96NA8 513 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 ALPK1Q96QP1 1244 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 PITHD1Q9GZP4 211 aaPredicted RBP9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 LIME1Q9H400 295 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 LIN28AQ9H9Z2 209 aaKnown RBP9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 MRPS33Q9Y291 106 aaKnown RBP9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 CLCA3PQ9Y6N3 262 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 MPDZO75970 2070 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 AKAP6Q13023 2319 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 ABCA2Q9BZC7 2435 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 A0A088AWK7 358 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 A0A0G2JMM0 328 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 A0A1W2PPB8 328 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 A0A1W2PRS3 328 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 KIR3DP1A8MWS1 328 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 WWP2O00308 870 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 B3GALT2O43825 422 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 CLEC3AO75596 197 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 GNAZP19086 355 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 ZNF10P21506 573 aaPredicted RBP9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 CDC25BP30305 580 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 HNRNPH1P31943 449 aaKnown RBP9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 HPDP32754 393 aaPredicted RBP9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 MAGEA5P43359 124 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 MAN2A2P49641 1150 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 RNF4P78317 190 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 ADAM8P78325 824 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 TBL3Q12788 808 aaKnown RBP9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 FOXD4Q12950 439 aaPredicted RBP9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 RCN2Q14257 317 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 CEBPEQ15744 281 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 PPP1R3AQ16821 1122 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 MPEG1Q2M385 716 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 FBXL19-AS1Q494R0 122 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 PIGGQ5H8A4 983 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 C1orf185Q5T7R7 199 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 TEDDM1Q5T9Z0 273 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 TMIGD1Q6UXZ0 262 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 SLCO4C1Q6ZQN7 724 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 TMPRSS11BQ86T26 416 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 PPIL6Q8IXY8 311 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 ZZZ3Q8IYH5 903 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 RASGEF1CQ8N431 466 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 TRIM58Q8NG06 486 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 OR2L5Q8NG80 312 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 FAM222BQ8WU58 562 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 KIAA1191Q96A73 305 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 SERINC2Q96SA4 455 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 USB1Q9BQ65 265 aaKnown RBP9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 GPATCH1Q9BRR8 931 aaKnown RBP9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 CAPS2Q9BXY5 557 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 ALOXE3Q9BYJ1 711 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 CLEC4MQ9H2X3 399 aaPredicted RBP9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 ACKR4Q9NPB9 350 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 SACM1LQ9NTJ5 587 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 B4GALT7Q9UBV7 327 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 IKZF3Q9UKT9 509 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 ACAD8Q9UKU7 415 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 DAPP1Q9UN19 280 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 LIPGQ9Y5X9 500 aa9.11□□□□□ -0.95
TRAFD1-207ENST00000550051 NINQ8N4C6 2090 aa9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 TRGV5A0A0B4J1U4 118 aa9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 ATP6AP2A0A1C7CYW4 349 aa9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 HSPB2A8KAH6 182 aa9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 ERI3O43414 337 aaKnown RBP9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 ZNF354AO60765 605 aaPredicted RBP9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 ATP6AP2O75787 350 aa9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 TBX6O95947 436 aaPredicted RBP9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 P04436 131 aa9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 IFNA16P05015 189 aa9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 SAT1P21673 171 aa9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 PGGT1BP53609 377 aa9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 LIM2P55344 173 aa9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 CCZ1BP86790 482 aa9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 CCZ1P86791 482 aaPredicted RBP9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 SERTAD2Q14140 314 aa9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 HSPB2Q16082 182 aa9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 ZNF791Q3KP31 576 aaPredicted RBP9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 RNASEH2BQ5TBB1 312 aaKnown RBP9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 FAM45BPQ6NSW5 357 aa9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 CCDC137Q6PK04 289 aaKnown RBP9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 FAM47EQ6ZV65 393 aa9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 CDC20BQ86Y33 519 aa9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 OR14A16Q8NHC5 309 aa9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 GOT1L1Q8NHS2 421 aaPredicted RBP9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 FAM45AQ8TCE6 357 aa9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 CERS2Q96G23 380 aa9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 RMND5BQ96G75 393 aaPredicted RBP9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 CNPPD1Q9BV87 410 aa9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 GSX1Q9H4S2 264 aaPredicted RBP9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 LDAHQ9H6V9 325 aa9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 SH2D2AQ9NP31 389 aa9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 LZTFL1Q9NQ48 299 aa9.1□□□□□ -0.95
TRAFD1-207ENST00000550051 PRDM7Q9NQW5 492 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms