RNA–Protein interactions for RNA: ENST00000548032.6

SEC23A-204, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-204ENST00000548032 UBLCP1Q8WVY7 318 aaPredicted RBP13.55□□□□□ -0.24
SEC23A-204ENST00000548032 PSMG3-AS1Q96PY0 264 aa13.55□□□□□ -0.24
SEC23A-204ENST00000548032 BARD1Q99728 777 aaKnown RBP13.55□□□□□ -0.24
SEC23A-204ENST00000548032 CCDC77Q9BR77 488 aa13.55□□□□□ -0.24
SEC23A-204ENST00000548032 DEFB126Q9BYW3 111 aa13.55□□□□□ -0.24
SEC23A-204ENST00000548032 KLHL1Q9NR64 748 aa13.55□□□□□ -0.24
SEC23A-204ENST00000548032 KCMF1Q9P0J7 381 aa13.55□□□□□ -0.24
SEC23A-204ENST00000548032 PSMC3IPQ9P2W1 217 aaPredicted RBP13.55□□□□□ -0.24
SEC23A-204ENST00000548032 SHANK1Q9Y566 2161 aa13.54□□□□□ -0.24
SEC23A-204ENST00000548032 SMIM23A6NLE4 172 aa13.54□□□□□ -0.24
SEC23A-204ENST00000548032 A8MT66 165 aa13.54□□□□□ -0.24
SEC23A-204ENST00000548032 PLPP1O14494 284 aa13.54□□□□□ -0.24
SEC23A-204ENST00000548032 CTNSO60931 367 aa13.54□□□□□ -0.24
SEC23A-204ENST00000548032 LDB3O75112 727 aa13.54□□□□□ -0.24
SEC23A-204ENST00000548032 SEMA7AO75326 666 aa13.54□□□□□ -0.24
SEC23A-204ENST00000548032 SCELO95171 688 aa13.54□□□□□ -0.24
SEC23A-204ENST00000548032 RASAL1O95294 804 aa13.54□□□□□ -0.24
SEC23A-204ENST00000548032 SBK3P0C264 359 aa13.54□□□□□ -0.24
SEC23A-204ENST00000548032 TNNI3P19429 210 aa13.54□□□□□ -0.24
SEC23A-204ENST00000548032 TAC1P20366 129 aa13.54□□□□□ -0.24
SEC23A-204ENST00000548032 PTX3P26022 381 aaPredicted RBP13.54□□□□□ -0.24
SEC23A-204ENST00000548032 TPP2P29144 1249 aaPredicted RBP13.54□□□□□ -0.24
SEC23A-204ENST00000548032 CD96P40200 585 aa13.54□□□□□ -0.24
SEC23A-204ENST00000548032 CLCN2P51788 898 aa13.54□□□□□ -0.24
SEC23A-204ENST00000548032 CDH13P55290 713 aa13.54□□□□□ -0.24
SEC23A-204ENST00000548032 SRSF11Q05519 484 aaKnown RBP13.54□□□□□ -0.24
SEC23A-204ENST00000548032 OR1C1Q15619 314 aa13.54□□□□□ -0.24
SEC23A-204ENST00000548032 SGO1Q5FBB7 561 aa13.54□□□□□ -0.24
SEC23A-204ENST00000548032 ZNF766Q5HY98 468 aa13.54□□□□□ -0.24
SEC23A-204ENST00000548032 SPINK14Q6IE38 97 aa13.54□□□□□ -0.24
SEC23A-204ENST00000548032 MILR1Q7Z6M3 343 aa13.54□□□□□ -0.24
SEC23A-204ENST00000548032 B3GNT7Q8NFL0 401 aa13.54□□□□□ -0.24
SEC23A-204ENST00000548032 SREK1Q8WXA9 508 aaKnown RBP13.54□□□□□ -0.24
SEC23A-204ENST00000548032 NCLNQ969V3 563 aa13.54□□□□□ -0.24
SEC23A-204ENST00000548032 SIGLEC12Q96PQ1 595 aa13.54□□□□□ -0.24
SEC23A-204ENST00000548032 TAAR6Q96RI8 345 aa13.54□□□□□ -0.24
SEC23A-204ENST00000548032 ALOXE3Q9BYJ1 711 aa13.54□□□□□ -0.24
SEC23A-204ENST00000548032 ZBTB26Q9HCK0 441 aa13.54□□□□□ -0.24
SEC23A-204ENST00000548032 ADAP2Q9NPF8 381 aa13.54□□□□□ -0.24
SEC23A-204ENST00000548032 OLAHQ9NV23 265 aa13.54□□□□□ -0.24
SEC23A-204ENST00000548032 TMEM216Q9P0N5 145 aa13.54□□□□□ -0.24
SEC23A-204ENST00000548032 TSC22D4Q9Y3Q8 395 aa13.54□□□□□ -0.24
SEC23A-204ENST00000548032 CLDN16Q9Y5I7 305 aa13.54□□□□□ -0.24
SEC23A-204ENST00000548032 TEX15Q9BXT5 2789 aa13.54□□□□□ -0.24
SEC23A-204ENST00000548032 SCN2AQ99250 2005 aa13.53□□□□□ -0.24
SEC23A-204ENST00000548032 BLACEA4D250 179 aa13.53□□□□□ -0.24
SEC23A-204ENST00000548032 ETHE1O95571 254 aa13.53□□□□□ -0.24
SEC23A-204ENST00000548032 SHBGP04278 402 aa13.53□□□□□ -0.24
SEC23A-204ENST00000548032 RPS17P08708 135 aaKnown RBP13.53□□□□□ -0.24
SEC23A-204ENST00000548032 PYGBP11216 843 aa13.53□□□□□ -0.24
SEC23A-204ENST00000548032 SLCO1A2P46721 670 aa13.53□□□□□ -0.24
SEC23A-204ENST00000548032 PMP22Q01453 160 aa13.53□□□□□ -0.24
SEC23A-204ENST00000548032 IFT88Q13099 833 aa13.53□□□□□ -0.24
SEC23A-204ENST00000548032 TRAF3Q13114 568 aa13.53□□□□□ -0.24
SEC23A-204ENST00000548032 TERF2Q15554 542 aa13.53□□□□□ -0.24
SEC23A-204ENST00000548032 ELAVL1Q15717 326 aaKnown RBP13.53□□□□□ -0.24
SEC23A-204ENST00000548032 INAQ16352 499 aa13.53□□□□□ -0.24
SEC23A-204ENST00000548032 GPR180Q86V85 440 aa13.53□□□□□ -0.24
SEC23A-204ENST00000548032 OR4N5Q8IXE1 308 aa13.53□□□□□ -0.24
SEC23A-204ENST00000548032 LGI4Q8N135 537 aa13.53□□□□□ -0.24
SEC23A-204ENST00000548032 TMEM151AQ8N4L1 468 aa13.53□□□□□ -0.24
SEC23A-204ENST00000548032 EIF1ADQ8N9N8 165 aaKnown RBP13.53□□□□□ -0.24
SEC23A-204ENST00000548032 APCDD1LQ8NCL9 501 aa13.53□□□□□ -0.24
SEC23A-204ENST00000548032 ST6GALNAC3Q8NDV1 305 aa13.53□□□□□ -0.24
SEC23A-204ENST00000548032 OR4F6Q8NGB9 312 aa13.53□□□□□ -0.24
SEC23A-204ENST00000548032 WDR20Q8TBZ3 569 aa13.53□□□□□ -0.24
SEC23A-204ENST00000548032 VMP1Q96GC9 406 aa13.53□□□□□ -0.24
SEC23A-204ENST00000548032 C5orf34Q96MH7 638 aa13.53□□□□□ -0.24
SEC23A-204ENST00000548032 NTMT1Q9BV86 223 aa13.53□□□□□ -0.24
SEC23A-204ENST00000548032 HES7Q9BYE0 225 aa13.53□□□□□ -0.24
SEC23A-204ENST00000548032 FETUBQ9UGM5 382 aa13.53□□□□□ -0.24
SEC23A-204ENST00000548032 CLCA3PQ9Y6N3 262 aa13.53□□□□□ -0.24
SEC23A-204ENST00000548032 UTP20O75691 2785 aaKnown RBP13.53□□□□□ -0.24
SEC23A-204ENST00000548032 CNTRLQ7Z7A1 2325 aa13.52□□□□□ -0.24
SEC23A-204ENST00000548032 FOXO6A8MYZ6 492 aa13.52□□□□□ -0.25
SEC23A-204ENST00000548032 FOXE1O00358 373 aaPredicted RBP13.52□□□□□ -0.25
SEC23A-204ENST00000548032 PPP6CO00743 305 aa13.52□□□□□ -0.25
SEC23A-204ENST00000548032 FCHO1O14526 889 aa13.52□□□□□ -0.25
SEC23A-204ENST00000548032 FGF17O60258 216 aa13.52□□□□□ -0.25
SEC23A-204ENST00000548032 EEDO75530 441 aaKnown RBP13.52□□□□□ -0.25
SEC23A-204ENST00000548032 PRKRAO75569 313 aaKnown RBP13.52□□□□□ -0.25
SEC23A-204ENST00000548032 OTCP00480 354 aa13.52□□□□□ -0.25
SEC23A-204ENST00000548032 GBAP04062 536 aa13.52□□□□□ -0.25
SEC23A-204ENST00000548032 EDN3P14138 238 aa13.52□□□□□ -0.25
SEC23A-204ENST00000548032 CD46P15529 392 aa13.52□□□□□ -0.25
SEC23A-204ENST00000548032 HNRNPH2P55795 449 aaKnown RBP13.52□□□□□ -0.25
SEC23A-204ENST00000548032 MLF1P58340 268 aa13.52□□□□□ -0.25
SEC23A-204ENST00000548032 CUL3Q13618 768 aa13.52□□□□□ -0.25
SEC23A-204ENST00000548032 SERTAD2Q14140 314 aa13.52□□□□□ -0.25
SEC23A-204ENST00000548032 ZNF468Q5VIY5 522 aaPredicted RBP13.52□□□□□ -0.25
SEC23A-204ENST00000548032 FRG2Q64ET8 278 aa13.52□□□□□ -0.25
SEC23A-204ENST00000548032 C18orf63Q68DL7 685 aa13.52□□□□□ -0.25
SEC23A-204ENST00000548032 CYP20A1Q6UW02 462 aa13.52□□□□□ -0.25
SEC23A-204ENST00000548032 TMEM132CQ8N3T6 1108 aa13.52□□□□□ -0.25
SEC23A-204ENST00000548032 ZCCHC7Q8N3Z6 543 aaKnown RBP13.52□□□□□ -0.25
SEC23A-204ENST00000548032 MDS2Q8NDY4 140 aa13.52□□□□□ -0.25
SEC23A-204ENST00000548032 TRPC4APQ8TEL6 797 aa13.52□□□□□ -0.25
SEC23A-204ENST00000548032 ZNF483Q8TF39 744 aaPredicted RBP13.52□□□□□ -0.25
SEC23A-204ENST00000548032 DAZLQ92904 295 aaKnown RBP13.52□□□□□ -0.25
SEC23A-204ENST00000548032 FRG2BQ96QU4 278 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms