RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 MMP25Q9NPA2 562 aa17.55■□□□□ 0.4
PRPF40B-206ENST00000547764 LUZP4Q9P127 313 aa17.55■□□□□ 0.4
PRPF40B-206ENST00000547764 PLLPQ9Y342 182 aa17.55■□□□□ 0.4
PRPF40B-206ENST00000547764 CSAG2Q9Y5P2 127 aa17.55■□□□□ 0.4
PRPF40B-206ENST00000547764 SPACA6W5XKT8 324 aa17.55■□□□□ 0.4
PRPF40B-206ENST00000547764 CTNSO60931 367 aa17.54■□□□□ 0.4
PRPF40B-206ENST00000547764 SORBS2O94875 1100 aaKnown RBP17.54■□□□□ 0.4
PRPF40B-206ENST00000547764 SEMA3DO95025 777 aa17.54■□□□□ 0.4
PRPF40B-206ENST00000547764 CPN2P22792 545 aa17.54■□□□□ 0.4
PRPF40B-206ENST00000547764 NAGLUP54802 743 aa17.54■□□□□ 0.4
PRPF40B-206ENST00000547764 DNAJB13P59910 316 aa17.54■□□□□ 0.4
PRPF40B-206ENST00000547764 ZNF844Q08AG5 666 aa17.54■□□□□ 0.4
PRPF40B-206ENST00000547764 PLEKHN1Q494U1 663 aaPredicted RBP17.54■□□□□ 0.4
PRPF40B-206ENST00000547764 TCHHL1Q5QJ38 904 aaPredicted RBP17.54■□□□□ 0.4
PRPF40B-206ENST00000547764 GPR180Q86V85 440 aa17.54■□□□□ 0.4
PRPF40B-206ENST00000547764 EFCAB3Q8N7B9 438 aa17.54■□□□□ 0.4
PRPF40B-206ENST00000547764 Q8NA96 180 aa17.54■□□□□ 0.4
PRPF40B-206ENST00000547764 IQCGQ9H095 443 aaKnown RBP17.54■□□□□ 0.4
PRPF40B-206ENST00000547764 PNO1Q9NRX1 252 aaKnown RBP17.54■□□□□ 0.4
PRPF40B-206ENST00000547764 OXSMQ9NWU1 459 aa17.54■□□□□ 0.4
PRPF40B-206ENST00000547764 B3GNT3Q9Y2A9 372 aa17.54■□□□□ 0.4
PRPF40B-206ENST00000547764 STK38LQ9Y2H1 464 aa17.54■□□□□ 0.4
PRPF40B-206ENST00000547764 ATG4BQ9Y4P1 393 aa17.54■□□□□ 0.4
PRPF40B-206ENST00000547764 A0A0A6YYD5 115 aa17.53■□□□□ 0.4
PRPF40B-206ENST00000547764 SAGE2PA6NJ88 616 aa17.53■□□□□ 0.4
PRPF40B-206ENST00000547764 A8MUI8 341 aa17.53■□□□□ 0.4
PRPF40B-206ENST00000547764 PYCARD-AS1I3L0S3 204 aa17.53■□□□□ 0.4
PRPF40B-206ENST00000547764 J3QKU1 62 aa17.53■□□□□ 0.4
PRPF40B-206ENST00000547764 MANBAO00462 879 aa17.53■□□□□ 0.4
PRPF40B-206ENST00000547764 TMPRSS11DO60235 418 aa17.53■□□□□ 0.4
PRPF40B-206ENST00000547764 SPAG7O75391 227 aa17.53■□□□□ 0.4
PRPF40B-206ENST00000547764 UQCRHP07919 91 aa17.53■□□□□ 0.4
PRPF40B-206ENST00000547764 PPP2R1BP30154 601 aa17.53■□□□□ 0.4
PRPF40B-206ENST00000547764 MLLT10P55197 1068 aa17.53■□□□□ 0.4
PRPF40B-206ENST00000547764 PKNOX1P55347 436 aa17.53■□□□□ 0.4
PRPF40B-206ENST00000547764 HNRNPH2P55795 449 aaKnown RBP17.53■□□□□ 0.4
PRPF40B-206ENST00000547764 KRT71Q3SY84 523 aa17.53■□□□□ 0.4
PRPF40B-206ENST00000547764 MRM1Q6IN84 353 aaKnown RBP17.53■□□□□ 0.4
PRPF40B-206ENST00000547764 H3F3CQ6NXT2 135 aa17.53■□□□□ 0.4
PRPF40B-206ENST00000547764 Q6ZS92 163 aa17.53■□□□□ 0.4
PRPF40B-206ENST00000547764 NUDT13Q86X67 352 aa17.53■□□□□ 0.4
PRPF40B-206ENST00000547764 NFAM1Q8NET5 270 aaPredicted RBP17.53■□□□□ 0.4
PRPF40B-206ENST00000547764 METTL6Q8TCB7 284 aa17.53■□□□□ 0.4
PRPF40B-206ENST00000547764 HBEGFQ99075 208 aa17.53■□□□□ 0.4
PRPF40B-206ENST00000547764 MRPL1Q9BYD6 325 aaKnown RBP17.53■□□□□ 0.4
PRPF40B-206ENST00000547764 SLC29A3Q9BZD2 475 aa17.53■□□□□ 0.4
PRPF40B-206ENST00000547764 BRF2Q9HAW0 419 aa17.53■□□□□ 0.4
PRPF40B-206ENST00000547764 KCNK13Q9HB14 408 aa17.53■□□□□ 0.4
PRPF40B-206ENST00000547764 SLAMF7Q9NQ25 335 aa17.53■□□□□ 0.4
PRPF40B-206ENST00000547764 MS4A12Q9NXJ0 267 aa17.53■□□□□ 0.4
PRPF40B-206ENST00000547764 PHF11Q9UIL8 331 aa17.53■□□□□ 0.4
PRPF40B-206ENST00000547764 MID2Q9UJV3 735 aa17.53■□□□□ 0.4
PRPF40B-206ENST00000547764 SLC12A4Q9UP95 1085 aa17.53■□□□□ 0.4
PRPF40B-206ENST00000547764 ASB4Q9Y574 426 aa17.53■□□□□ 0.4
PRPF40B-206ENST00000547764 SPENQ96T58 3664 aaKnown RBP17.53■□□□□ 0.4
PRPF40B-206ENST00000547764 MYOCOSA0A1B0GUC4 107 aa17.52■□□□□ 0.4
PRPF40B-206ENST00000547764 BLACEA4D250 179 aa17.52■□□□□ 0.4
PRPF40B-206ENST00000547764 TTLL8A6PVC2 850 aa17.52■□□□□ 0.4
PRPF40B-206ENST00000547764 UBFD1O14562 309 aaKnown RBP17.52■□□□□ 0.4
PRPF40B-206ENST00000547764 LDB3O75112 727 aa17.52■□□□□ 0.4
PRPF40B-206ENST00000547764 ESRRBO95718 433 aa17.52■□□□□ 0.4
PRPF40B-206ENST00000547764 KRT6AP02538 564 aa17.52■□□□□ 0.4
PRPF40B-206ENST00000547764 GBAP04062 536 aa17.52■□□□□ 0.4
PRPF40B-206ENST00000547764 KRT6BP04259 564 aa17.52■□□□□ 0.4
PRPF40B-206ENST00000547764 KRT6CP48668 564 aa17.52■□□□□ 0.4
PRPF40B-206ENST00000547764 NAA20P61599 178 aa17.52■□□□□ 0.4
PRPF40B-206ENST00000547764 STX4Q12846 297 aa17.52■□□□□ 0.4
PRPF40B-206ENST00000547764 CFAP157Q5JU67 520 aa17.52■□□□□ 0.4
PRPF40B-206ENST00000547764 C18orf63Q68DL7 685 aa17.52■□□□□ 0.4
PRPF40B-206ENST00000547764 CYP20A1Q6UW02 462 aa17.52■□□□□ 0.4
PRPF40B-206ENST00000547764 C10orf107Q8IVU9 208 aa17.52■□□□□ 0.4
PRPF40B-206ENST00000547764 IQCKQ8N0W5 287 aa17.52■□□□□ 0.4
PRPF40B-206ENST00000547764 DNAJB14Q8TBM8 379 aa17.52■□□□□ 0.4
PRPF40B-206ENST00000547764 ELP5Q8TE02 316 aa17.52■□□□□ 0.4
PRPF40B-206ENST00000547764 AGAP11Q8TF27 550 aa17.52■□□□□ 0.4
PRPF40B-206ENST00000547764 ANKRD9Q96BM1 317 aaPredicted RBP17.52■□□□□ 0.4
PRPF40B-206ENST00000547764 SMC6Q96SB8 1091 aa17.52■□□□□ 0.4
PRPF40B-206ENST00000547764 ALOXE3Q9BYJ1 711 aa17.52■□□□□ 0.4
PRPF40B-206ENST00000547764 MID1IP1Q9NPA3 183 aa17.52■□□□□ 0.4
PRPF40B-206ENST00000547764 LYARQ9NX58 379 aaKnown RBP17.52■□□□□ 0.4
PRPF40B-206ENST00000547764 PLA2G3Q9NZ20 509 aa17.52■□□□□ 0.4
PRPF40B-206ENST00000547764 STMN3Q9NZ72 180 aa17.52■□□□□ 0.4
PRPF40B-206ENST00000547764 AHSPQ9NZD4 102 aa17.52■□□□□ 0.4
PRPF40B-206ENST00000547764 SLC17A7Q9P2U7 560 aa17.52■□□□□ 0.4
PRPF40B-206ENST00000547764 PROM1O43490 865 aa17.51■□□□□ 0.39
PRPF40B-206ENST00000547764 ULK1O75385 1050 aa17.51■□□□□ 0.39
PRPF40B-206ENST00000547764 MYO1DO94832 1006 aa17.51■□□□□ 0.39
PRPF40B-206ENST00000547764 ENO1P06733 434 aaKnown RBP17.51■□□□□ 0.39
PRPF40B-206ENST00000547764 KLK1P06870 262 aa17.51■□□□□ 0.39
PRPF40B-206ENST00000547764 FAM58BPP0C7Q3 252 aa17.51■□□□□ 0.39
PRPF40B-206ENST00000547764 CREB1P16220 341 aa17.51■□□□□ 0.39
PRPF40B-206ENST00000547764 HMOX2P30519 316 aa17.51■□□□□ 0.39
PRPF40B-206ENST00000547764 TLX1P31314 330 aaPredicted RBP17.51■□□□□ 0.39
PRPF40B-206ENST00000547764 TNFRSF17Q02223 184 aa17.51■□□□□ 0.39
PRPF40B-206ENST00000547764 ID2Q02363 134 aa17.51■□□□□ 0.39
PRPF40B-206ENST00000547764 ZNF33BQ06732 778 aa17.51■□□□□ 0.39
PRPF40B-206ENST00000547764 PCLAFQ15004 111 aa17.51■□□□□ 0.39
PRPF40B-206ENST00000547764 TERF2Q15554 542 aa17.51■□□□□ 0.39
PRPF40B-206ENST00000547764 ABHD17BQ5VST6 288 aa17.51■□□□□ 0.39
PRPF40B-206ENST00000547764 LIPMQ5VYY2 423 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms