RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 FADS2P1A8MWK0 482 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 E7EQ34 232 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 SOX1O00570 391 aaPredicted RBP8.26□□□□□ -1.09
CLIP1-218ENST00000545889 TFECO14948 347 aaPredicted RBP8.26□□□□□ -1.09
CLIP1-218ENST00000545889 SMAD6O43541 496 aaKnown RBP8.26□□□□□ -1.09
CLIP1-218ENST00000545889 GJB3O75712 270 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 PGLSO95336 258 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 LATS1O95835 1130 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 IL32P24001 234 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 DNAJB1P25685 340 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 IVDP26440 423 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 YAP1P46937 504 aaKnown RBP8.26□□□□□ -1.09
CLIP1-218ENST00000545889 NR0B2Q15466 257 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 PPP1R3AQ16821 1122 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 BTBD16Q32M84 506 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 ARL13AQ5H913 290 aaPredicted RBP8.26□□□□□ -1.09
CLIP1-218ENST00000545889 FBXO42Q6P3S6 717 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 SCML4Q8N228 414 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 AGBL5Q8NDL9 886 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 OR52J3Q8NH60 311 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 SLC44A1Q8WWI5 657 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 SEC14L1Q92503 715 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 ZNF778Q96MU6 729 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 EBF4Q9BQW3 602 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 OSBPL11Q9BXB4 747 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 TDRD1Q9BXT4 1180 aaKnown RBP8.26□□□□□ -1.09
CLIP1-218ENST00000545889 TXLNGYQ9BZA5 131 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 ACTL8Q9H568 366 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 COQ10BQ9H8M1 238 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 TMEM138Q9NPI0 162 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 HPF1Q9NWY4 346 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 SLC39A1Q9NY26 324 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 ZNF282Q9UDV7 671 aaPredicted RBP8.26□□□□□ -1.09
CLIP1-218ENST00000545889 PNMA8CA0A1B0GUJ8 204 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 HCRTR2O43614 444 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 NOS1APO75052 506 aaPredicted RBP8.26□□□□□ -1.09
CLIP1-218ENST00000545889 UBL4AP11441 157 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 CCR2P41597 374 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 CSNK1EP49674 416 aaKnown RBP8.26□□□□□ -1.09
CLIP1-218ENST00000545889 HTRA4P83105 476 aaPredicted RBP8.26□□□□□ -1.09
CLIP1-218ENST00000545889 RBBP4Q09028 425 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 ZNF460Q14592 562 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 FIP1L1Q6UN15 594 aaKnown RBP8.26□□□□□ -1.09
CLIP1-218ENST00000545889 RTL10Q7L3V2 364 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 GALNT12Q8IXK2 581 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 CADM3Q8N126 398 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 FAM156AQ8NDB6 213 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 GRHL3Q8TE85 626 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 UBASH3BQ8TF42 649 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 MYDGFQ969H8 173 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 TMEM74Q96NL1 305 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 TSGA13Q96PP4 275 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 PSKH2Q96QS6 385 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 DPH7Q9BTV6 452 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 WDR12Q9GZL7 423 aaKnown RBP8.26□□□□□ -1.09
CLIP1-218ENST00000545889 CLEC4MQ9H2X3 399 aaPredicted RBP8.26□□□□□ -1.09
CLIP1-218ENST00000545889 MEAF6Q9HAF1 191 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 PNPOQ9NVS9 261 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 PPP4R1LQ9P1A2 415 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 A0A1B0GTW7 788 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 ELOVL7A1L3X0 281 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 ZNF487B1APH4 448 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 I6L893 689 aaPredicted RBP8.26□□□□□ -1.09
CLIP1-218ENST00000545889 M0QX08 132 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 SCO2O43819 266 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 TRIM3O75382 744 aaPredicted RBP8.26□□□□□ -1.09
CLIP1-218ENST00000545889 CYP17A1P05093 508 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 CBSLP0DN79 551 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 PRKAR1AP10644 381 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 ADRB3P13945 408 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 HOXB6P17509 224 aaKnown RBP8.26□□□□□ -1.09
CLIP1-218ENST00000545889 CBSP35520 551 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 PTPN5P54829 565 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 GPX6P59796 221 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 SRP54P61011 504 aaKnown RBP8.26□□□□□ -1.09
CLIP1-218ENST00000545889 NFKB2Q00653 900 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 PLCXD2Q0VAA5 305 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.26□□□□□ -1.09
CLIP1-218ENST00000545889 RNF111Q6ZNA4 994 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 ASPGQ86U10 573 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 IGFN1Q86VF2 1251 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 DCP2Q8IU60 420 aaKnown RBP8.26□□□□□ -1.09
CLIP1-218ENST00000545889 PHC2Q8IXK0 858 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 ZNF611Q8N823 705 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 OR4K14Q8NGD5 310 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 ASB15Q8WXK1 588 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 MYRFLQ96LU7 910 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 SMIM14Q96QK8 99 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 UHRF1Q96T88 793 aaPredicted RBP8.26□□□□□ -1.09
CLIP1-218ENST00000545889 HHATLQ9HCP6 504 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 THUMPD1Q9NXG2 353 aaKnown RBP8.26□□□□□ -1.09
CLIP1-218ENST00000545889 PTRH2Q9Y3E5 179 aaKnown RBP8.26□□□□□ -1.09
CLIP1-218ENST00000545889 CNOT1A5YKK6 2376 aaKnown RBP8.26□□□□□ -1.09
CLIP1-218ENST00000545889 MICAL3Q7RTP6 2002 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.26□□□□□ -1.09
CLIP1-218ENST00000545889 DHRS12A0PJE2 317 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 TRIM38O00635 465 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 LINC01565O15544 149 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 ATE1O95260 518 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 SERPINA6P08185 405 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms