RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 DARS2Q6PI48 645 aaKnown RBP14.08□□□□□ -0.16
CLSTN3-216ENST00000545663 BBS12Q6ZW61 710 aa14.08□□□□□ -0.16
CLSTN3-216ENST00000545663 ZNF550Q7Z398 422 aa14.08□□□□□ -0.16
CLSTN3-216ENST00000545663 ARIH2OSQ8N7S6 290 aa14.08□□□□□ -0.16
CLSTN3-216ENST00000545663 MFSD9Q8NBP5 474 aa14.08□□□□□ -0.16
CLSTN3-216ENST00000545663 INTS12Q96CB8 462 aaKnown RBP14.08□□□□□ -0.16
CLSTN3-216ENST00000545663 LRRC45Q96CN5 670 aa14.08□□□□□ -0.16
CLSTN3-216ENST00000545663 ZC3HAV1LQ96H79 300 aaKnown RBP14.08□□□□□ -0.16
CLSTN3-216ENST00000545663 KCNK17Q96T54 332 aa14.08□□□□□ -0.16
CLSTN3-216ENST00000545663 MED18Q9BUE0 208 aa14.08□□□□□ -0.16
CLSTN3-216ENST00000545663 LRRC40Q9H9A6 602 aa14.08□□□□□ -0.16
CLSTN3-216ENST00000545663 FAM114A2Q9NRY5 505 aa14.08□□□□□ -0.16
CLSTN3-216ENST00000545663 HOMER3Q9NSC5 361 aa14.08□□□□□ -0.16
CLSTN3-216ENST00000545663 JRKLQ9Y4A0 524 aa14.08□□□□□ -0.16
CLSTN3-216ENST00000545663 CTAGE15A4D2H0 777 aa14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 ZNF839A8K0R7 811 aa14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 APOC4-APOC2K7ER74 178 aa14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 PSMD12O00232 456 aaPredicted RBP14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 ZNF189O75820 626 aaPredicted RBP14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 ACSL3O95573 720 aa14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 PLAUP00749 431 aa14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 APOC2P02655 101 aa14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 CATP04040 527 aaKnown RBP14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 RBP3P10745 1247 aa14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 RNH1P13489 461 aaKnown RBP14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 EGR1P18146 543 aa14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 FMO4P31512 558 aa14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 PPARGP37231 505 aaPredicted RBP14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 HNRNPFP52597 415 aaKnown RBP14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 EIF3EP60228 445 aaKnown RBP14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 RAB8AP61006 207 aa14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 ACVR1Q04771 509 aa14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 RPS6KA1Q15418 735 aa14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 P3H1Q32P28 736 aa14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 UBAP2Q5T6F2 1119 aaKnown RBP14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 VASNQ6EMK4 673 aa14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 SYDE1Q6ZW31 735 aaPredicted RBP14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 CTAGE6Q86UF2 777 aa14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 CDKL3Q8IVW4 592 aaPredicted RBP14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 REXO1L1PQ8IX06 675 aa14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 GCNT2Q8N0V5 402 aa14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 WDYHV1Q96HA8 205 aa14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 HES6Q96HZ4 224 aa14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 BIRC8Q96P09 236 aa14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 SFXN3Q9BWM7 321 aa14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 GOLPH3Q9H4A6 298 aa14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 CALHM2Q9HA72 323 aa14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 CATSPERZQ9NTU4 200 aa14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 BOKQ9UMX3 212 aaPredicted RBP14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 CAPN6Q9Y6Q1 641 aa14.07□□□□□ -0.16
CLSTN3-216ENST00000545663 CD3EAPO15446 510 aaKnown RBP14.06□□□□□ -0.16
CLSTN3-216ENST00000545663 TRAPPC6AO75865 159 aa14.06□□□□□ -0.16
CLSTN3-216ENST00000545663 HRH2P25021 359 aa14.06□□□□□ -0.16
CLSTN3-216ENST00000545663 GDF1P27539 372 aa14.06□□□□□ -0.16
CLSTN3-216ENST00000545663 IMPA1P29218 277 aa14.06□□□□□ -0.16
CLSTN3-216ENST00000545663 THBS2P35442 1172 aa14.06□□□□□ -0.16
CLSTN3-216ENST00000545663 PRAMEP78395 509 aa14.06□□□□□ -0.16
CLSTN3-216ENST00000545663 OCRLQ01968 901 aa14.06□□□□□ -0.16
CLSTN3-216ENST00000545663 PARP6Q2NL67 630 aa14.06□□□□□ -0.16
CLSTN3-216ENST00000545663 ZNF791Q3KP31 576 aaPredicted RBP14.06□□□□□ -0.16
CLSTN3-216ENST00000545663 CCDC181Q5TID7 509 aa14.06□□□□□ -0.16
CLSTN3-216ENST00000545663 SLC22A10Q63ZE4 541 aa14.06□□□□□ -0.16
CLSTN3-216ENST00000545663 OPN5Q6U736 354 aa14.06□□□□□ -0.16
CLSTN3-216ENST00000545663 BTLAQ7Z6A9 289 aa14.06□□□□□ -0.16
CLSTN3-216ENST00000545663 SCUBE1Q8IWY4 988 aa14.06□□□□□ -0.16
CLSTN3-216ENST00000545663 PM20D2Q8IYS1 436 aa14.06□□□□□ -0.16
CLSTN3-216ENST00000545663 TMEM52Q8NDY8 209 aa14.06□□□□□ -0.16
CLSTN3-216ENST00000545663 UTP15Q8TED0 518 aaKnown RBP14.06□□□□□ -0.16
CLSTN3-216ENST00000545663 PPP1R2P1Q96PQ5 205 aa14.06□□□□□ -0.16
CLSTN3-216ENST00000545663 ANGPTL4Q9BY76 406 aa14.06□□□□□ -0.16
CLSTN3-216ENST00000545663 ADAM19Q9H013 955 aa14.06□□□□□ -0.16
CLSTN3-216ENST00000545663 ANAPC5Q9UJX4 755 aa14.06□□□□□ -0.16
CLSTN3-216ENST00000545663 ZNF148Q9UQR1 794 aa14.06□□□□□ -0.16
CLSTN3-216ENST00000545663 C4orf51C9J302 202 aa14.05□□□□□ -0.16
CLSTN3-216ENST00000545663 ADAM11O75078 769 aa14.05□□□□□ -0.16
CLSTN3-216ENST00000545663 AVILO75366 819 aa14.05□□□□□ -0.16
CLSTN3-216ENST00000545663 CDH1P12830 882 aa14.05□□□□□ -0.16
CLSTN3-216ENST00000545663 ATP5DP30049 168 aa14.05□□□□□ -0.16
CLSTN3-216ENST00000545663 PTPN7P35236 360 aa14.05□□□□□ -0.16
CLSTN3-216ENST00000545663 GRIA1P42261 906 aa14.05□□□□□ -0.16
CLSTN3-216ENST00000545663 TTPAP49638 278 aa14.05□□□□□ -0.16
CLSTN3-216ENST00000545663 RNF4P78317 190 aa14.05□□□□□ -0.16
CLSTN3-216ENST00000545663 PDLIM3Q53GG5 364 aaPredicted RBP14.05□□□□□ -0.16
CLSTN3-216ENST00000545663 IL17RELQ6ZVW7 336 aa14.05□□□□□ -0.16
CLSTN3-216ENST00000545663 CA13Q8N1Q1 262 aa14.05□□□□□ -0.16
CLSTN3-216ENST00000545663 NTNG2Q96CW9 530 aa14.05□□□□□ -0.16
CLSTN3-216ENST00000545663 UGT2B28Q9BY64 529 aa14.05□□□□□ -0.16
CLSTN3-216ENST00000545663 KLHL31Q9H511 634 aa14.05□□□□□ -0.16
CLSTN3-216ENST00000545663 QPCTLQ9NXS2 382 aa14.05□□□□□ -0.16
CLSTN3-216ENST00000545663 PSD3Q9NYI0 1048 aa14.05□□□□□ -0.16
CLSTN3-216ENST00000545663 PYCARDQ9ULZ3 195 aa14.05□□□□□ -0.16
CLSTN3-216ENST00000545663 LAMP3Q9UQV4 416 aa14.05□□□□□ -0.16
CLSTN3-216ENST00000545663 ZKSCAN5Q9Y2L8 839 aa14.05□□□□□ -0.16
CLSTN3-216ENST00000545663 NINQ8N4C6 2090 aa14.04□□□□□ -0.16
CLSTN3-216ENST00000545663 OR1F1O43749 312 aa14.04□□□□□ -0.16
CLSTN3-216ENST00000545663 NDUFS3O75489 264 aa14.04□□□□□ -0.16
CLSTN3-216ENST00000545663 TJP3O95049 919 aa14.04□□□□□ -0.16
CLSTN3-216ENST00000545663 FTCDO95954 541 aa14.04□□□□□ -0.16
CLSTN3-216ENST00000545663 RPS3P23396 243 aaKnown RBP eCLIP14.04□□□□□ -0.169e-7■■■□□ 18.6
CLSTN3-216ENST00000545663 CCKARP32238 428 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms