RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 ERVFC1P60507 584 aa14.35□□□□□ -0.11
USP28-214ENST00000545540 SP140Q13342 867 aa14.35□□□□□ -0.11
USP28-214ENST00000545540 NXNL2Q5VZ03 156 aa14.35□□□□□ -0.11
USP28-214ENST00000545540 ADCK2Q7Z695 626 aa14.35□□□□□ -0.11
USP28-214ENST00000545540 OR4D11Q8NGI4 311 aa14.35□□□□□ -0.11
USP28-214ENST00000545540 OR4C15Q8NGM1 316 aa14.35□□□□□ -0.11
USP28-214ENST00000545540 TIGARQ9NQ88 270 aa14.35□□□□□ -0.11
USP28-214ENST00000545540 SPHK2Q9NRA0 654 aa14.35□□□□□ -0.11
USP28-214ENST00000545540 TAS2R9Q9NYW1 312 aa14.35□□□□□ -0.11
USP28-214ENST00000545540 DYRK1BQ9Y463 629 aa14.35□□□□□ -0.11
USP28-214ENST00000545540 CEP290O15078 2479 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 PRR23AA6NEV1 266 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 ARHGEF15O94989 841 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 CCNB2O95067 398 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 RNF144AP50876 292 aaPredicted RBP14.34□□□□□ -0.11
USP28-214ENST00000545540 IRF3Q14653 427 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 ZNF750Q32MQ0 723 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 SPDYE7PQ495Y7 208 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 COMTD1Q86VU5 262 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 CPXM2Q8N436 756 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 TCEANCQ8N8B7 351 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 OR56A3Q8NH54 315 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 DOK4Q8TEW6 326 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 FCRL1Q96LA6 429 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 CEP19Q96LK0 163 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 LRRC3BQ96PB8 259 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 PHOX2BQ99453 314 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 BEX2Q9BXY8 128 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 PPIL1Q9Y3C6 166 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 H7BY64 318 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 M0R3H8 397 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 POP7O75817 140 aaKnown RBP14.34□□□□□ -0.11
USP28-214ENST00000545540 LATS1O95835 1130 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 ALDH1A1P00352 501 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 MAGEA8P43361 318 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 MANFP55145 182 aaKnown RBP14.34□□□□□ -0.11
USP28-214ENST00000545540 CAV3P56539 151 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 SSX1Q16384 188 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 SPIN4Q56A73 249 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 USP43Q70EL4 1123 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 ZFP41Q8N8Y5 198 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 SLC38A5Q8WUX1 472 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 XAGE5Q8WWM1 108 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 PRAP1Q96NZ9 151 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 TDP1Q9NUW8 608 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 TVP23BQ9NYZ1 205 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 IL36AQ9UHA7 158 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 TAC3Q9UHF0 121 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 SCN2AQ99250 2005 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 LOC110117498-PIK3R3F6TDL0 507 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 RNASET2O00584 256 aaKnown RBP14.34□□□□□ -0.11
USP28-214ENST00000545540 FRS3O43559 492 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 CYP2A6P11509 494 aaPredicted RBP14.34□□□□□ -0.11
USP28-214ENST00000545540 GRK3P35626 688 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 RPS19P39019 145 aaKnown RBP14.34□□□□□ -0.11
USP28-214ENST00000545540 GPR1P46091 355 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 TBCEQ15813 527 aaPredicted RBP14.34□□□□□ -0.11
USP28-214ENST00000545540 LIPKQ5VXJ0 399 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 OR52N2Q8NGI0 321 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 ARSGQ96EG1 525 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 PIP5K1AQ99755 562 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 MMP27Q9H306 513 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 MVB12BQ9H7P6 319 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 TMEM39AQ9NV64 488 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 IL20RAQ9UHF4 553 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 POFUT2Q9Y2G5 429 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 HCN4Q9Y3Q4 1203 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 PCDHGB6Q9Y5F9 930 aa14.34□□□□□ -0.11
USP28-214ENST00000545540 C5orf58C9J3I9 102 aa14.33□□□□□ -0.12
USP28-214ENST00000545540 PRMT3O60678 531 aa14.33□□□□□ -0.12
USP28-214ENST00000545540 B4GALT2O60909 372 aa14.33□□□□□ -0.12
USP28-214ENST00000545540 CLEC2LP0C7M8 214 aa14.33□□□□□ -0.12
USP28-214ENST00000545540 C1GALT1C1LP0DN25 315 aa14.33□□□□□ -0.12
USP28-214ENST00000545540 GABRB1P18505 474 aa14.33□□□□□ -0.12
USP28-214ENST00000545540 PCYT1AP49585 367 aa14.33□□□□□ -0.12
USP28-214ENST00000545540 TEAD4Q15561 434 aa14.33□□□□□ -0.12
USP28-214ENST00000545540 CDKL4Q5MAI5 379 aa14.33□□□□□ -0.12
USP28-214ENST00000545540 MPP7Q5T2T1 576 aa14.33□□□□□ -0.12
USP28-214ENST00000545540 FRMPD2BQ6IN97 320 aa14.33□□□□□ -0.12
USP28-214ENST00000545540 ZNF547Q8IVP9 402 aa14.33□□□□□ -0.12
USP28-214ENST00000545540 COL21A1Q96P44 957 aa14.33□□□□□ -0.12
USP28-214ENST00000545540 ZSCAN5AQ9BUG6 496 aa14.33□□□□□ -0.12
USP28-214ENST00000545540 ANKMY1Q9P2S6 941 aa14.33□□□□□ -0.12
USP28-214ENST00000545540 MUTYHQ9UIF7 546 aa14.33□□□□□ -0.12
USP28-214ENST00000545540 GPR52Q9Y2T5 361 aa14.33□□□□□ -0.12
USP28-214ENST00000545540 F5P12259 2224 aa14.33□□□□□ -0.12
USP28-214ENST00000545540 SCN3AQ9NY46 2000 aa14.33□□□□□ -0.12
USP28-214ENST00000545540 LAMA1P25391 3075 aa14.33□□□□□ -0.12
USP28-214ENST00000545540 A0A1W2PS29 197 aa14.33□□□□□ -0.12
USP28-214ENST00000545540 KMOO15229 486 aa14.33□□□□□ -0.12
USP28-214ENST00000545540 SLC16A5O15375 505 aa14.33□□□□□ -0.12
USP28-214ENST00000545540 NNMTP40261 264 aa14.33□□□□□ -0.12
USP28-214ENST00000545540 RAB15P59190 212 aa14.33□□□□□ -0.12
USP28-214ENST00000545540 COPZ1P61923 177 aa14.33□□□□□ -0.12
USP28-214ENST00000545540 SYPL1Q16563 259 aa14.33□□□□□ -0.12
USP28-214ENST00000545540 FAM214AQ32MH5 1076 aa14.33□□□□□ -0.12
USP28-214ENST00000545540 BCL7AQ4VC05 210 aa14.33□□□□□ -0.12
USP28-214ENST00000545540 VN1R5Q7Z5H4 357 aa14.33□□□□□ -0.12
USP28-214ENST00000545540 AKAP14Q86UN6 197 aa14.33□□□□□ -0.12
USP28-214ENST00000545540 TRAM1L1Q8N609 369 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms