RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 ATP8B3O60423 1300 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 ARID2Q68CP9 1835 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 CENPFP49454 3210 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 IBTKQ9P2D0 1353 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-222ENST00000545308 KDM3BQ7LBC6 1761 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 MACROD2A1Z1Q3 448 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 MTMR11A4FU01 709 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 SLC15A5A6NIM6 579 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 KPNA7A9QM74 516 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 SLC22A2O15244 555 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 ATP6V0E1O15342 81 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 PRKNO60260 465 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-222ENST00000545308 PRDM1O75626 825 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 STBD1O95210 358 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 TRIM16O95361 564 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 TSHBP01222 138 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 NR3C1P04150 777 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 CHRNGP07510 517 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 NGFRP08138 427 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 PLA2G2AP14555 144 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 CPA3P15088 417 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 ALDH4A1P30038 563 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 KIF5BP33176 963 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 NR2C2P49116 596 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 FMO5P49326 533 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 CLDN17P56750 224 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 RPP38P78345 283 aaKnown RBP3.67□□□□□ -1.82
SNHG1-222ENST00000545308 DMP1Q13316 513 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-222ENST00000545308 MSLNQ13421 630 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-222ENST00000545308 TSTA3Q13630 321 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-222ENST00000545308 CDH18Q13634 790 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 RBM39Q14498 530 aaKnown RBP3.67□□□□□ -1.82
SNHG1-222ENST00000545308 KARSQ15046 597 aaKnown RBP3.67□□□□□ -1.82
SNHG1-222ENST00000545308 MTHFSDQ2M296 383 aaKnown RBP3.67□□□□□ -1.82
SNHG1-222ENST00000545308 TAF1BQ53T94 588 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-222ENST00000545308 ARMCX4Q5H9R4 360 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 C9orf57Q5W0N0 161 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 OR4C11Q6IEV9 310 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 UGT3A1Q6NUS8 523 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 OLFM4Q6UX06 510 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 DLEU7Q6UYE1 221 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 SPATA2LQ8IUW3 424 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-222ENST00000545308 CCDC60Q8IWA6 550 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-222ENST00000545308 STHQ8IWL8 128 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 LMNTD2Q8IXW0 634 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 ZC3H3Q8IXZ2 948 aaKnown RBP3.67□□□□□ -1.82
SNHG1-222ENST00000545308 THEM5Q8N1Q8 247 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 PRSS35Q8N3Z0 413 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 DEFB123Q8N688 67 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 ARL6IP6Q8N6S5 226 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 ZNF383Q8NA42 475 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 OR4A16Q8NH70 328 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 HAS2Q92819 552 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 LGALS12Q96DT0 336 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 SCRN2Q96FV2 425 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 C4orf45Q96LM5 186 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 ZNF583Q96ND8 569 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 RHNO1Q9BSD3 238 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 HIPK2Q9H2X6 1198 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 CPVLQ9H3G5 476 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 DPEP3Q9H4B8 488 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 TFB2MQ9H5Q4 396 aaKnown RBP3.67□□□□□ -1.82
SNHG1-222ENST00000545308 DDX31Q9H8H2 851 aaKnown RBP3.67□□□□□ -1.82
SNHG1-222ENST00000545308 RNF121Q9H920 327 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 PIGVQ9NUD9 493 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 MIS18AQ9NYP9 233 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.67□□□□□ -1.82
SNHG1-222ENST00000545308 SH3BGRL2Q9UJC5 107 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 TNNQ9UQP3 1299 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 SH3GLB1Q9Y371 365 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 ZNF646O15015 1829 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-222ENST00000545308 MAP3K15Q6ZN16 1313 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 FAM205AQ6ZU69 1335 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 MYO3BQ8WXR4 1341 aa3.67□□□□□ -1.82
SNHG1-222ENST00000545308 DDX60Q8IY21 1712 aaKnown RBP3.67□□□□□ -1.82
SNHG1-222ENST00000545308 SZT2Q5T011 3432 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 M0R296 226 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 SLC28A1O00337 649 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 ZNF197O14709 1029 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 MAGEB2O15479 319 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 HSF2BPO75031 334 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 OR6B1O95007 311 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 IFNB1P01574 187 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 IGHDP01880 384 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 CXCL10P02778 98 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 RAF1P04049 648 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 ATP1B1P05026 303 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 KRT3P12035 628 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 LIFP15018 202 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 B4GALT1P15291 398 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 CA6P23280 308 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 GJB2P29033 226 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 HOXA1P49639 335 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-222ENST00000545308 NR0B1P51843 470 aaKnown RBP3.66□□□□□ -1.82
SNHG1-222ENST00000545308 GMFBP60983 142 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 ZXDBP98169 803 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 SLC3A1Q07837 685 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 KLHL30Q0D2K2 578 aa3.66□□□□□ -1.82
SNHG1-222ENST00000545308 TAF7Q15545 349 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-222ENST00000545308 PTPN14Q15678 1187 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms