RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 ACOT9Q9Y305 439 aa15.12■□□□□ 0.01
DDX55-212ENST00000544738 A0A0G2JN53 185 aa15.11■□□□□ 0.01
DDX55-212ENST00000544738 CCDC189A1A4V9 331 aa15.11■□□□□ 0.01
DDX55-212ENST00000544738 A8MUA0 341 aa15.11■□□□□ 0.01
DDX55-212ENST00000544738 SLC25A12O75746 678 aa15.11■□□□□ 0.01
DDX55-212ENST00000544738 LTA4HP09960 611 aaKnown RBP15.11■□□□□ 0.01
DDX55-212ENST00000544738 SLC35E2BP0CK96 405 aa15.11■□□□□ 0.01
DDX55-212ENST00000544738 ABOP16442 354 aa15.11■□□□□ 0.01
DDX55-212ENST00000544738 TRHRP34981 398 aaPredicted RBP15.11■□□□□ 0.01
DDX55-212ENST00000544738 KCNC1P48547 511 aa15.11■□□□□ 0.01
DDX55-212ENST00000544738 HLCSP50747 726 aa15.11■□□□□ 0.01
DDX55-212ENST00000544738 CKAP4Q07065 602 aaKnown RBP15.11■□□□□ 0.01
DDX55-212ENST00000544738 SLC13A2Q13183 592 aa15.11■□□□□ 0.01
DDX55-212ENST00000544738 CHIT1Q13231 466 aa15.11■□□□□ 0.01
DDX55-212ENST00000544738 EFTUD2Q15029 972 aaKnown RBP eCLIP15.11■□□□□ 0.012e-11■■■■■ 32.6
DDX55-212ENST00000544738 MAPKAPK3Q16644 382 aa15.11■□□□□ 0.01
DDX55-212ENST00000544738 ABHD17CQ6PCB6 329 aa15.11■□□□□ 0.01
DDX55-212ENST00000544738 ZDHHC24Q6UX98 284 aa15.11■□□□□ 0.01
DDX55-212ENST00000544738 TAOK1Q7L7X3 1001 aa15.11■□□□□ 0.01
DDX55-212ENST00000544738 GALNTL5Q7Z4T8 443 aa15.11■□□□□ 0.01
DDX55-212ENST00000544738 ISCA2Q86U28 154 aa15.11■□□□□ 0.01
DDX55-212ENST00000544738 APCDD1LQ8NCL9 501 aa15.11■□□□□ 0.01
DDX55-212ENST00000544738 KCNC2Q96PR1 638 aa15.11■□□□□ 0.01
DDX55-212ENST00000544738 FOXC2Q99958 501 aa15.11■□□□□ 0.01
DDX55-212ENST00000544738 HES7Q9BYE0 225 aa15.11■□□□□ 0.01
DDX55-212ENST00000544738 ALG9Q9H6U8 611 aa15.11■□□□□ 0.01
DDX55-212ENST00000544738 PNO1Q9NRX1 252 aaKnown RBP15.11■□□□□ 0.01
DDX55-212ENST00000544738 COQ3Q9NZJ6 369 aa15.11■□□□□ 0.01
DDX55-212ENST00000544738 PPT2Q9UMR5 302 aa15.11■□□□□ 0.01
DDX55-212ENST00000544738 DAPP1Q9UN19 280 aa15.11■□□□□ 0.01
DDX55-212ENST00000544738 PPIEQ9UNP9 301 aaKnown RBP15.11■□□□□ 0.01
DDX55-212ENST00000544738 INTS1Q8N201 2190 aaKnown RBP15.11■□□□□ 0.01
DDX55-212ENST00000544738 FLNAP21333 2647 aaKnown RBP15.1■□□□□ 0.01
DDX55-212ENST00000544738 SYCE1LA8MT33 242 aa15.1■□□□□ 0.01
DDX55-212ENST00000544738 PRAMEF4O60810 478 aa15.1■□□□□ 0.01
DDX55-212ENST00000544738 KERAO60938 352 aa15.1■□□□□ 0.01
DDX55-212ENST00000544738 MYO1DO94832 1006 aa15.1■□□□□ 0.01
DDX55-212ENST00000544738 TBX6O95947 436 aaPredicted RBP15.1■□□□□ 0.01
DDX55-212ENST00000544738 CD22P20273 847 aa15.1■□□□□ 0.01
DDX55-212ENST00000544738 SERPINB1P30740 379 aa15.1■□□□□ 0.01
DDX55-212ENST00000544738 ST13P50502 369 aaKnown RBP15.1■□□□□ 0.01
DDX55-212ENST00000544738 LIM2P55344 173 aa15.1■□□□□ 0.01
DDX55-212ENST00000544738 GUCY2DQ02846 1103 aa15.1■□□□□ 0.01
DDX55-212ENST00000544738 LTBQ06643 244 aa15.1■□□□□ 0.01
DDX55-212ENST00000544738 PCDH1Q08174 1060 aa15.1■□□□□ 0.01
DDX55-212ENST00000544738 FOXD4Q12950 439 aaPredicted RBP15.1■□□□□ 0.01
DDX55-212ENST00000544738 E2F2Q14209 437 aa15.1■□□□□ 0.01
DDX55-212ENST00000544738 TRADDQ15628 312 aa15.1■□□□□ 0.01
DDX55-212ENST00000544738 PRAMEF9Q5VWM5 478 aa15.1■□□□□ 0.01
DDX55-212ENST00000544738 CHSY3Q70JA7 882 aa15.1■□□□□ 0.01
DDX55-212ENST00000544738 Q71RC1 249 aaPredicted RBP15.1■□□□□ 0.01
DDX55-212ENST00000544738 VN1R5Q7Z5H4 357 aa15.1■□□□□ 0.01
DDX55-212ENST00000544738 CMC1Q7Z7K0 106 aa15.1■□□□□ 0.01
DDX55-212ENST00000544738 C17orf53Q8N3J3 647 aaPredicted RBP15.1■□□□□ 0.01
DDX55-212ENST00000544738 TMEM132CQ8N3T6 1108 aa15.1■□□□□ 0.01
DDX55-212ENST00000544738 C7orf57Q8NEG2 295 aa15.1■□□□□ 0.01
DDX55-212ENST00000544738 EXT2Q93063 718 aa15.1■□□□□ 0.01
DDX55-212ENST00000544738 VMP1Q96GC9 406 aa15.1■□□□□ 0.01
DDX55-212ENST00000544738 ATOH8Q96SQ7 321 aa15.1■□□□□ 0.01
DDX55-212ENST00000544738 CCDC77Q9BR77 488 aa15.1■□□□□ 0.01
DDX55-212ENST00000544738 TBCDQ9BTW9 1192 aa15.1■□□□□ 0.01
DDX55-212ENST00000544738 CXXC4Q9H2H0 198 aa15.1■□□□□ 0.01
DDX55-212ENST00000544738 PRM3Q9NNZ6 103 aa15.1■□□□□ 0.01
DDX55-212ENST00000544738 ADAP2Q9NPF8 381 aa15.1■□□□□ 0.01
DDX55-212ENST00000544738 OPTCQ9UBM4 332 aa15.1■□□□□ 0.01
DDX55-212ENST00000544738 GTF3C1Q12789 2109 aa15.1■□□□□ 0.01
DDX55-212ENST00000544738 A0A087X1B8 175 aa15.09■□□□□ 0.01
DDX55-212ENST00000544738 TRBV11-1A0A0K0K1C0 115 aa15.09■□□□□ 0.01
DDX55-212ENST00000544738 SUPT3HB4E1H0 165 aa15.09■□□□□ 0.01
DDX55-212ENST00000544738 CYR61O00622 381 aa15.09■□□□□ 0.01
DDX55-212ENST00000544738 NME2P1O60361 137 aa15.09■□□□□ 0.01
DDX55-212ENST00000544738 CTNSO60931 367 aa15.09■□□□□ 0.01
DDX55-212ENST00000544738 SUPT3HO75486 399 aa15.09■□□□□ 0.01
DDX55-212ENST00000544738 EPB42P16452 691 aa15.09■□□□□ 0.01
DDX55-212ENST00000544738 EPORP19235 508 aa15.09■□□□□ 0.01
DDX55-212ENST00000544738 NME2P22392 152 aa15.09■□□□□ 0.01
DDX55-212ENST00000544738 CERS1P27544 350 aa15.09■□□□□ 0.01
DDX55-212ENST00000544738 MSH2P43246 934 aa15.09■□□□□ 0.01
DDX55-212ENST00000544738 DLG1Q12959 904 aa15.09■□□□□ 0.01
DDX55-212ENST00000544738 ELAVL1Q15717 326 aaKnown RBP15.09■□□□□ 0.01
DDX55-212ENST00000544738 FAM83EQ2M2I3 478 aa15.09■□□□□ 0.01
DDX55-212ENST00000544738 TMEM35AQ53FP2 167 aa15.09■□□□□ 0.01
DDX55-212ENST00000544738 ZNF468Q5VIY5 522 aaPredicted RBP15.09■□□□□ 0.01
DDX55-212ENST00000544738 CES4AQ5XG92 561 aa15.09■□□□□ 0.01
DDX55-212ENST00000544738 C8orf74Q6P047 294 aa15.09■□□□□ 0.01
DDX55-212ENST00000544738 MED27Q6P2C8 311 aa15.09■□□□□ 0.01
DDX55-212ENST00000544738 CEP128Q6ZU80 1094 aa15.09■□□□□ 0.01
DDX55-212ENST00000544738 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.09■□□□□ 0.01
DDX55-212ENST00000544738 DOLPP1Q86YN1 238 aa15.09■□□□□ 0.01
DDX55-212ENST00000544738 FAM47BQ8NA70 645 aa15.09■□□□□ 0.01
DDX55-212ENST00000544738 RHEBL1Q8TAI7 183 aa15.09■□□□□ 0.01
DDX55-212ENST00000544738 UBTD2Q8WUN7 234 aa15.09■□□□□ 0.01
DDX55-212ENST00000544738 FRMD6Q96NE9 622 aa15.09■□□□□ 0.01
DDX55-212ENST00000544738 F2RL3Q96RI0 385 aa15.09■□□□□ 0.01
DDX55-212ENST00000544738 LYRM4Q9HD34 91 aa15.09■□□□□ 0.01
DDX55-212ENST00000544738 PRDM7Q9NQW5 492 aa15.09■□□□□ 0.01
DDX55-212ENST00000544738 ADGRE2Q9UHX3 823 aa15.09■□□□□ 0.01
DDX55-212ENST00000544738 FBXW2Q9UKT8 454 aa15.09■□□□□ 0.01
DDX55-212ENST00000544738 KLF13Q9Y2Y9 288 aaPredicted RBP15.09■□□□□ 0.01
DDX55-212ENST00000544738 SPACA6W5XKT8 324 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms