RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 IGHV1-45A0A0A0MS14 117 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 A0A1W2PQ72 361 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 PRMT3O60678 531 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 PRKRAO75569 313 aaKnown RBP14.18□□□□□ -0.14
CD9-210ENST00000543916 DNAJB5O75953 348 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 COX6A1P12074 109 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 CPN2P22792 545 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 GRK2P25098 689 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 SLC1A6P48664 564 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 RAE1P78406 368 aaKnown RBP14.18□□□□□ -0.14
CD9-210ENST00000543916 TNFRSF17Q02223 184 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 BTKQ06187 659 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 BST1Q10588 318 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 STX3Q13277 289 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 PCOLCEQ15113 449 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 NSDHLQ15738 373 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 IMPG1Q17R60 797 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 DCAF10Q5QP82 559 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 C18orf63Q68DL7 685 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 CYP20A1Q6UW02 462 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 PCSK4Q6UW60 755 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 RNF165Q6ZSG1 346 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 PAGE2Q7Z2X7 111 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 ZNF595Q8IYB9 648 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 CLYBLQ8N0X4 340 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 AMER2Q8N7J2 671 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 ZNF781Q8N8C0 355 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 OR2T11Q8NH01 316 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 TWIST2Q8WVJ9 160 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 METTL21AQ8WXB1 218 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 APIPQ96GX9 242 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 PTCHD1Q96NR3 888 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 SORT1Q99523 831 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 ING2Q9H160 280 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 ACBD3Q9H3P7 528 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 PRTFDC1Q9NRG1 225 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 PHF11Q9UIL8 331 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 MRPS33Q9Y291 106 aaKnown RBP14.18□□□□□ -0.14
CD9-210ENST00000543916 MMACHCQ9Y4U1 282 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 CLDN16Q9Y5I7 305 aa14.18□□□□□ -0.14
CD9-210ENST00000543916 IGHV3-20A0A0C4DH32 117 aa14.17□□□□□ -0.14
CD9-210ENST00000543916 A0A1W2PR48 441 aa14.17□□□□□ -0.14
CD9-210ENST00000543916 TCRBV16S1A1N1A0A5B0 115 aa14.17□□□□□ -0.14
CD9-210ENST00000543916 PCDH17O14917 1159 aa14.17□□□□□ -0.14
CD9-210ENST00000543916 PIP5K1BO14986 540 aa14.17□□□□□ -0.14
CD9-210ENST00000543916 PROM1O43490 865 aa14.17□□□□□ -0.14
CD9-210ENST00000543916 CHEK2O96017 543 aa14.17□□□□□ -0.14
CD9-210ENST00000543916 HPP00738 406 aa14.17□□□□□ -0.14
CD9-210ENST00000543916 LINC00032P0C843 101 aa14.17□□□□□ -0.14
CD9-210ENST00000543916 POLE2P56282 527 aa14.17□□□□□ -0.14
CD9-210ENST00000543916 HSD17B7P56937 341 aa14.17□□□□□ -0.14
CD9-210ENST00000543916 Q0VFX4 171 aa14.17□□□□□ -0.14
CD9-210ENST00000543916 SPIN4Q56A73 249 aa14.17□□□□□ -0.14
CD9-210ENST00000543916 SPDYAQ5MJ70 313 aa14.17□□□□□ -0.14
CD9-210ENST00000543916 CCNYL2Q5T2Q4 361 aa14.17□□□□□ -0.14
CD9-210ENST00000543916 CPEB2Q7Z5Q1 589 aaKnown RBP14.17□□□□□ -0.14
CD9-210ENST00000543916 CLNKQ7Z7G1 428 aa14.17□□□□□ -0.14
CD9-210ENST00000543916 TMEM102Q8N9M5 508 aaPredicted RBP14.17□□□□□ -0.14
CD9-210ENST00000543916 UCN3Q969E3 161 aa14.17□□□□□ -0.14
CD9-210ENST00000543916 C11orf24Q96F05 449 aaPredicted RBP14.17□□□□□ -0.14
CD9-210ENST00000543916 FER1L6-AS2Q96M78 137 aa14.17□□□□□ -0.14
CD9-210ENST00000543916 WDR77Q9BQA1 342 aaPredicted RBP14.17□□□□□ -0.14
CD9-210ENST00000543916 ZNF700Q9H0M5 742 aa14.17□□□□□ -0.14
CD9-210ENST00000543916 ZNF160Q9HCG1 818 aa14.17□□□□□ -0.14
CD9-210ENST00000543916 TEX10Q9NXF1 929 aaPredicted RBP14.17□□□□□ -0.14
CD9-210ENST00000543916 RAP2CQ9Y3L5 183 aa14.17□□□□□ -0.14
CD9-210ENST00000543916 SPACA6W5XKT8 324 aa14.17□□□□□ -0.14
CD9-210ENST00000543916 NSG1A0A0A6YYJ2 146 aa14.16□□□□□ -0.14
CD9-210ENST00000543916 MYOCOSA0A1B0GUC4 107 aa14.16□□□□□ -0.14
CD9-210ENST00000543916 ARHGAP10A1A4S6 786 aa14.16□□□□□ -0.14
CD9-210ENST00000543916 ERVH48-1M5A8F1 160 aa14.16□□□□□ -0.14
CD9-210ENST00000543916 SLC28A1O00337 649 aa14.16□□□□□ -0.14
CD9-210ENST00000543916 CLDN4O14493 209 aa14.16□□□□□ -0.14
CD9-210ENST00000543916 PCDH7O60245 1069 aa14.16□□□□□ -0.14
CD9-210ENST00000543916 RSL1D1O76021 490 aaKnown RBP14.16□□□□□ -0.14
CD9-210ENST00000543916 SEC24DO94855 1032 aaPredicted RBP14.16□□□□□ -0.14
CD9-210ENST00000543916 AIFM1O95831 613 aa14.16□□□□□ -0.14
CD9-210ENST00000543916 FAM87AP0C7U9 286 aa14.16□□□□□ -0.14
CD9-210ENST00000543916 NR2F6P10588 404 aa14.16□□□□□ -0.14
CD9-210ENST00000543916 MAPK12P53778 367 aa14.16□□□□□ -0.14
CD9-210ENST00000543916 RRADP55042 308 aa14.16□□□□□ -0.14
CD9-210ENST00000543916 PPP2R2AP63151 447 aa14.16□□□□□ -0.14
CD9-210ENST00000543916 ACSM2AQ08AH3 577 aa14.16□□□□□ -0.14
CD9-210ENST00000543916 SLC13A2Q13183 592 aa14.16□□□□□ -0.14
CD9-210ENST00000543916 SFT2D3Q587I9 215 aa14.16□□□□□ -0.14
CD9-210ENST00000543916 ACSM2BQ68CK6 577 aa14.16□□□□□ -0.14
CD9-210ENST00000543916 Q6ZSR9 355 aa14.16□□□□□ -0.14
CD9-210ENST00000543916 DDIASQ8IXT1 998 aa14.16□□□□□ -0.14
CD9-210ENST00000543916 EBPLQ9BY08 206 aa14.16□□□□□ -0.14
CD9-210ENST00000543916 RPF2Q9H7B2 306 aaKnown RBP14.16□□□□□ -0.14
CD9-210ENST00000543916 MS4A12Q9NXJ0 267 aa14.16□□□□□ -0.14
CD9-210ENST00000543916 C19orf25Q9UFG5 118 aaPredicted RBP14.16□□□□□ -0.14
CD9-210ENST00000543916 MCM8Q9UJA3 840 aa14.16□□□□□ -0.14
CD9-210ENST00000543916 HAO1Q9UJM8 370 aa14.16□□□□□ -0.14
CD9-210ENST00000543916 GLOD5A6NK44 160 aa14.15□□□□□ -0.14
CD9-210ENST00000543916 WASHC1A8K0Z3 465 aa14.15□□□□□ -0.14
CD9-210ENST00000543916 NPIPB8E9PQR5 432 aa14.15□□□□□ -0.14
CD9-210ENST00000543916 RGS14O43566 566 aa14.15□□□□□ -0.14
CD9-210ENST00000543916 FGF17O60258 216 aa14.15□□□□□ -0.14
CD9-210ENST00000543916 CTNSO60931 367 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms