RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 STT3AP46977 705 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 CSNK1G2P78368 415 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 GNA13Q14344 377 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 SLC5A12Q1EHB4 618 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 MTSS1LQ765P7 747 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 TSEN54Q7Z6J9 526 aaKnown RBP9.39□□□□□ -0.91
SS18-205ENST00000542420 OR10G2Q8NGC3 310 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 NFKBIDQ8NI38 313 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 FAR1Q8WVX9 515 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 CAMK1GQ96NX5 476 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 TWSG1Q9GZX9 223 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 BTBD1Q9H0C5 482 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 TPK1Q9H3S4 243 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 FKBP14Q9NWM8 211 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 B3GNT3Q9Y2A9 372 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 U3KQV3 271 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 SH3D21A4FU49 640 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 PLK4O00444 970 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 PRICKLE3O43900 615 aaPredicted RBP9.39□□□□□ -0.91
SS18-205ENST00000542420 INHBBP09529 407 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 MYOGP15173 224 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 MATN1P21941 496 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 ENTPD1P49961 510 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 RPP38P78345 283 aaKnown RBP9.39□□□□□ -0.91
SS18-205ENST00000542420 SGCGQ13326 291 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 TSTA3Q13630 321 aaPredicted RBP9.39□□□□□ -0.91
SS18-205ENST00000542420 C16orf72Q14CZ0 275 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 SF1Q15637 639 aaKnown RBP9.39□□□□□ -0.91
SS18-205ENST00000542420 COX20Q5RI15 118 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 UBE2UQ5VVX9 321 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 OR4C11Q6IEV9 310 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 BHLHB9Q6PI77 547 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.39□□□□□ -0.91
SS18-205ENST00000542420 USP30Q70CQ3 517 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 SPRED2Q7Z698 418 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 RNF130Q86XS8 419 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 ANKRD53Q8N9V6 530 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 TBC1D15Q8TC07 691 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 SPPL2AQ8TCT8 520 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 CREB3L4Q8TEY5 395 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 CIDECQ96AQ7 238 aaPredicted RBP9.39□□□□□ -0.91
SS18-205ENST00000542420 CHFRQ96EP1 664 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 IL17FQ96PD4 163 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 PRM3Q9NNZ6 103 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 RAPGEFL1Q9UHV5 662 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 DOLKQ9UPQ8 538 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 HCN4Q9Y3Q4 1203 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 MYO7AQ13402 2215 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 CLDN24A6NM45 220 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 MITFO75030 526 aaPredicted RBP9.38□□□□□ -0.91
SS18-205ENST00000542420 FUCA1P04066 466 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 NTRK1P04629 796 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 IFNW1P05000 195 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 AGXTP21549 392 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 KIR2DL1P43626 348 aaPredicted RBP9.38□□□□□ -0.91
SS18-205ENST00000542420 MC1RQ01726 317 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 RAB30Q15771 203 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 TBCEQ15813 527 aaPredicted RBP9.38□□□□□ -0.91
SS18-205ENST00000542420 NPTX1Q15818 432 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 UAP1L1Q3KQV9 507 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 C2orf27AQ580R0 203 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 TOR1AIP1Q5JTV8 583 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 SDE2Q6IQ49 451 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 ZNF852Q6ZMS4 543 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 ADGRF3Q8IZF5 1079 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 ZNF740Q8NDX6 193 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 BPIFB6Q8NFQ5 453 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 C9orf43Q8TAL5 461 aaPredicted RBP9.38□□□□□ -0.91
SS18-205ENST00000542420 APOBEC4Q8WW27 367 aaKnown RBP9.38□□□□□ -0.91
SS18-205ENST00000542420 TRUB1Q8WWH5 349 aaKnown RBP9.38□□□□□ -0.91
SS18-205ENST00000542420 MYDGFQ969H8 173 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 MRPL38Q96DV4 380 aaKnown RBP9.38□□□□□ -0.91
SS18-205ENST00000542420 YIPF6Q96EC8 236 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 ZNF607Q96SK3 696 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 SPATA5L1Q9BVQ7 753 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 CXorf36Q9H7Y0 433 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 ZNF556Q9HAH1 456 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 BCL2L10Q9HD36 194 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 SELENONQ9NZV5 590 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 ANKMY1Q9P2S6 941 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 ZFR2Q9UPR6 939 aaKnown RBP9.38□□□□□ -0.91
SS18-205ENST00000542420 PCDHGA6Q9Y5G7 932 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 PCDHGA10Q9Y5H3 936 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 PCYT1BQ9Y5K3 369 aaPredicted RBP9.38□□□□□ -0.91
SS18-205ENST00000542420 C5orf58C9J3I9 102 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 B4GAT1O43505 415 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 ADAP00813 363 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 CEACAM5P06731 702 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 IFI6P09912 130 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 TFPTP0C1Z6 253 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 CD247P20963 164 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 NTSR1P30989 418 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 SOAT1P35610 550 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 ALDH9A1P49189 494 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 ST13P50502 369 aaKnown RBP9.38□□□□□ -0.91
SS18-205ENST00000542420 BCAP31P51572 246 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 MANFP55145 182 aaKnown RBP9.38□□□□□ -0.91
SS18-205ENST00000542420 GP2P55259 537 aaKnown RBP9.38□□□□□ -0.91
SS18-205ENST00000542420 SPIBQ01892 262 aa9.38□□□□□ -0.91
SS18-205ENST00000542420 EMX1Q04741 257 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms