RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 PLPP5Q8NEB5 264 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 OR1N1Q8NGS0 311 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 HUS1BQ8NHY5 278 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 WDR20Q8TBZ3 569 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 ZNF473Q8WTR7 871 aaKnown RBP13.37□□□□□ -0.27
LTBR-209ENST00000541102 CCDC126Q96EE4 140 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 FAR2Q96K12 515 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 PTCHD1Q96NR3 888 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 OR1F2PQ96R84 312 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 F2RL3Q96RI0 385 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 C20orf27Q9GZN8 174 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 NTNG1Q9Y2I2 539 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 TIMM22Q9Y584 194 aa13.37□□□□□ -0.27
LTBR-209ENST00000541102 ASH1LQ9NR48 2969 aaKnown RBP13.37□□□□□ -0.27
LTBR-209ENST00000541102 DYTNA2CJ06 578 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 LRIT2A6NDA9 550 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 ANKDD1BA6NHY2 528 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 MAGEB17A8MXT2 336 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 FAM227AF5H4B4 570 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 PSMD12O00232 456 aaPredicted RBP13.36□□□□□ -0.27
LTBR-209ENST00000541102 SAP18O00422 153 aaKnown RBP13.36□□□□□ -0.27
LTBR-209ENST00000541102 ITM2AO43736 263 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 PRMT3O60678 531 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 UGDHO60701 494 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 LYPLA1O75608 230 aaPredicted RBP13.36□□□□□ -0.27
LTBR-209ENST00000541102 TGFB1P01137 390 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 CYC1P08574 325 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 SMIM10L1P0DMW3 83 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 RNH1P13489 461 aaKnown RBP13.36□□□□□ -0.27
LTBR-209ENST00000541102 BGNP21810 368 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 JAK1P23458 1154 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 SERPINB3P29508 390 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 AP2B1P63010 937 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 BTG2P78543 158 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 SRSF1Q07955 248 aaKnown RBP eCLIP13.36□□□□□ -0.27
LTBR-209ENST00000541102 LCP2Q13094 533 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 LAPTM5Q13571 262 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 NR6A1Q15406 480 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 HIST2H2ACQ16777 129 aaPredicted RBP13.36□□□□□ -0.27
LTBR-209ENST00000541102 GGTA1PQ4G0N0 100 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 PAGE2BQ5JRK9 111 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 CFAP157Q5JU67 520 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 ABHD17BQ5VST6 288 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 FCRLBQ6BAA4 426 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 HIST2H2AA3Q6FI13 130 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 PAPD4Q6PIY7 484 aaKnown RBP13.36□□□□□ -0.27
LTBR-209ENST00000541102 NUDCD3Q8IVD9 361 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 FAM26EQ8N5C1 309 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 TTLQ8NG68 377 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 MS4A6EQ96DS6 147 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 SMIM10Q96HG1 83 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 HBEGFQ99075 208 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 SORBS1Q9BX66 1292 aaKnown RBP13.36□□□□□ -0.27
LTBR-209ENST00000541102 PITHD1Q9GZP4 211 aaPredicted RBP13.36□□□□□ -0.27
LTBR-209ENST00000541102 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.36□□□□□ -0.27
LTBR-209ENST00000541102 OR51B5Q9H339 312 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 KCNK13Q9HB14 408 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 MID1IP1Q9NPA3 183 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 DMRT3Q9NQL9 472 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 STMN3Q9NZ72 180 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 MID2Q9UJV3 735 aa13.36□□□□□ -0.27
LTBR-209ENST00000541102 TMEM233B4DJY2 109 aa13.35□□□□□ -0.27
LTBR-209ENST00000541102 MANBAO00462 879 aa13.35□□□□□ -0.27
LTBR-209ENST00000541102 ERI3O43414 337 aaKnown RBP13.35□□□□□ -0.27
LTBR-209ENST00000541102 CLEC3AO75596 197 aa13.35□□□□□ -0.27
LTBR-209ENST00000541102 ESRRBO95718 433 aa13.35□□□□□ -0.27
LTBR-209ENST00000541102 WDPCPO95876 746 aa13.35□□□□□ -0.27
LTBR-209ENST00000541102 PDYNP01213 254 aa13.35□□□□□ -0.27
LTBR-209ENST00000541102 CHN1P15882 459 aa13.35□□□□□ -0.27
LTBR-209ENST00000541102 TSFMP43897 325 aaKnown RBP13.35□□□□□ -0.27
LTBR-209ENST00000541102 PLA2G16P53816 162 aa13.35□□□□□ -0.27
LTBR-209ENST00000541102 RPS13P62277 151 aaKnown RBP13.35□□□□□ -0.27
LTBR-209ENST00000541102 ZNF33BQ06732 778 aa13.35□□□□□ -0.27
LTBR-209ENST00000541102 CHI3L2Q15782 390 aa13.35□□□□□ -0.27
LTBR-209ENST00000541102 ADPRMQ3LIE5 342 aa13.35□□□□□ -0.27
LTBR-209ENST00000541102 ARL13AQ5H913 290 aaPredicted RBP13.35□□□□□ -0.27
LTBR-209ENST00000541102 FHL5Q5TD97 284 aa13.35□□□□□ -0.27
LTBR-209ENST00000541102 FRG2Q64ET8 278 aa13.35□□□□□ -0.27
LTBR-209ENST00000541102 PLAG1Q6DJT9 500 aa13.35□□□□□ -0.27
LTBR-209ENST00000541102 CLEC6AQ6EIG7 209 aa13.35□□□□□ -0.27
LTBR-209ENST00000541102 SCIMPQ6UWF3 145 aa13.35□□□□□ -0.27
LTBR-209ENST00000541102 CA13Q8N1Q1 262 aa13.35□□□□□ -0.27
LTBR-209ENST00000541102 PRR7Q8TB68 274 aa13.35□□□□□ -0.27
LTBR-209ENST00000541102 FRG2BQ96QU4 278 aa13.35□□□□□ -0.27
LTBR-209ENST00000541102 LPAR4Q99677 370 aa13.35□□□□□ -0.27
LTBR-209ENST00000541102 PAIP2Q9BPZ3 127 aaKnown RBP13.35□□□□□ -0.27
LTBR-209ENST00000541102 MS4A8Q9BY19 250 aa13.35□□□□□ -0.27
LTBR-209ENST00000541102 CLK4Q9HAZ1 481 aaKnown RBP13.35□□□□□ -0.27
LTBR-209ENST00000541102 AGPAT4Q9NRZ5 378 aa13.35□□□□□ -0.27
LTBR-209ENST00000541102 TRPS1Q9UHF7 1281 aa13.35□□□□□ -0.27
LTBR-209ENST00000541102 PTGDR2Q9Y5Y4 395 aa13.35□□□□□ -0.27
LTBR-209ENST00000541102 PTPN13Q12923 2485 aa13.35□□□□□ -0.27
LTBR-209ENST00000541102 CLEC18AA5D8T8 446 aa13.34□□□□□ -0.27
LTBR-209ENST00000541102 A8MUA0 341 aa13.34□□□□□ -0.27
LTBR-209ENST00000541102 HMGB1P1B2RPK0 211 aaPredicted RBP13.34□□□□□ -0.27
LTBR-209ENST00000541102 H3BQF6 201 aa13.34□□□□□ -0.27
LTBR-209ENST00000541102 RTCAO00442 366 aaKnown RBP13.34□□□□□ -0.27
LTBR-209ENST00000541102 BIRC5O15392 142 aa13.34□□□□□ -0.27
LTBR-209ENST00000541102 AGFG2O95081 481 aa13.34□□□□□ -0.27
LTBR-209ENST00000541102 CBX6O95503 412 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms