RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 MAP4K5Q9Y4K4 846 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 PCDHGB5Q9Y5G0 923 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 SCN2AQ99250 2005 aa11.62□□□□□ -0.55
AP003559.1-201ENST00000540906 ZNF860A6NHJ4 632 aa11.62□□□□□ -0.55
AP003559.1-201ENST00000540906 UPK1AO00322 258 aa11.62□□□□□ -0.55
AP003559.1-201ENST00000540906 ACOX3O15254 700 aa11.62□□□□□ -0.55
AP003559.1-201ENST00000540906 HNRNPRO43390 633 aaKnown RBP11.62□□□□□ -0.55
AP003559.1-201ENST00000540906 EIF2S1P05198 315 aaKnown RBP11.62□□□□□ -0.55
AP003559.1-201ENST00000540906 GIMD1P0DJR0 217 aa11.62□□□□□ -0.55
AP003559.1-201ENST00000540906 C8orf89P0DMQ9 161 aa11.62□□□□□ -0.55
AP003559.1-201ENST00000540906 UMPSP11172 480 aa11.62□□□□□ -0.55
AP003559.1-201ENST00000540906 FASLGP48023 281 aa11.62□□□□□ -0.55
AP003559.1-201ENST00000540906 CCT8P50990 548 aa11.62□□□□□ -0.55
AP003559.1-201ENST00000540906 TRA2BP62995 288 aaKnown RBP11.62□□□□□ -0.55
AP003559.1-201ENST00000540906 SLC9A5Q14940 896 aa11.62□□□□□ -0.55
AP003559.1-201ENST00000540906 HEPACAMQ14CZ8 416 aa11.62□□□□□ -0.55
AP003559.1-201ENST00000540906 NRF1Q16656 503 aa11.62□□□□□ -0.55
AP003559.1-201ENST00000540906 LRRC23Q53EV4 343 aaPredicted RBP11.62□□□□□ -0.55
AP003559.1-201ENST00000540906 TBPL2Q6SJ96 375 aa11.62□□□□□ -0.55
AP003559.1-201ENST00000540906 ANGPTL8Q6UXH0 198 aa11.62□□□□□ -0.55
AP003559.1-201ENST00000540906 OOSP2Q86WS3 158 aa11.62□□□□□ -0.55
AP003559.1-201ENST00000540906 TMEM126BQ8IUX1 230 aa11.62□□□□□ -0.55
AP003559.1-201ENST00000540906 ZCCHC7Q8N3Z6 543 aaKnown RBP11.62□□□□□ -0.55
AP003559.1-201ENST00000540906 AVL9Q8NBF6 648 aa11.62□□□□□ -0.55
AP003559.1-201ENST00000540906 GAL3ST3Q96A11 431 aa11.62□□□□□ -0.55
AP003559.1-201ENST00000540906 ZFYVE21Q9BQ24 234 aa11.62□□□□□ -0.55
AP003559.1-201ENST00000540906 GLIPR2Q9H4G4 154 aa11.62□□□□□ -0.55
AP003559.1-201ENST00000540906 SERHL2Q9H4I8 314 aa11.62□□□□□ -0.55
AP003559.1-201ENST00000540906 ANKMY1Q9P2S6 941 aa11.62□□□□□ -0.55
AP003559.1-201ENST00000540906 ENTPD2Q9Y5L3 495 aa11.62□□□□□ -0.55
AP003559.1-201ENST00000540906 RNF103-CHMP3A0A140T963 221 aa11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 LMO7DNF2Z398 122 aa11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 PROM1O43490 865 aa11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 UBXN7O94888 489 aa11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 MED26O95402 600 aa11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 RETP07949 1114 aa11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 FASP25445 335 aa11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 AQP1P29972 269 aa11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 CRATP43155 626 aa11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 GFERP55789 205 aa11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 STXBP1P61764 594 aaKnown RBP11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 EEF1A2Q05639 463 aaKnown RBP11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 ATP6AP1Q15904 470 aa11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 DEFB134Q4QY38 66 aa11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 SWT1Q5T5J6 900 aaKnown RBP11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 NKAIN2Q5VXU1 208 aa11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 OGFOD3Q6PK18 319 aa11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 FAM92BQ6ZTR7 304 aa11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 VTCN1Q7Z7D3 282 aa11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 SLC25A45Q8N413 288 aa11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 TNIP2Q8NFZ5 429 aa11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 OR52E4Q8NGH9 312 aa11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 OR52N2Q8NGI0 321 aa11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 SUN3Q8TAQ9 357 aa11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 OR5P2Q8WZ92 322 aa11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 EME1Q96AY2 570 aa11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 CNRIP1Q96F85 164 aaPredicted RBP11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 SLC47A1Q96FL8 570 aa11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 MAP3K3Q99759 626 aa11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 EFHD1Q9BUP0 239 aa11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 C1GALT1Q9NS00 363 aa11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 KCMF1Q9P0J7 381 aa11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 DOLKQ9UPQ8 538 aa11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 WBP11Q9Y2W2 641 aaKnown RBP11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 MAGED1Q9Y5V3 778 aaPredicted RBP11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 SNX8Q9Y5X2 465 aa11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 LAMA1P25391 3075 aa11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 BDP1A6H8Y1 2624 aa11.61□□□□□ -0.55
AP003559.1-201ENST00000540906 SLC9B1P1A6NJY1 282 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 DLGAP1O14490 977 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 PROS1P07225 676 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 IST1P53990 364 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 MANFP55145 182 aaKnown RBP11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 VSX2P58304 361 aaPredicted RBP11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 HNRNPKP61978 463 aaKnown RBP eCLIP11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 RGS1Q08116 209 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 GK3PQ14409 553 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 SAXO2Q658L1 398 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 ANKRD34AQ69YU3 496 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 IRGCQ6NXR0 463 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 HORMAD2Q8N7B1 307 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 OR5T3Q8NGG3 340 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 NFKBIDQ8NI38 313 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 ZNF764Q96H86 408 aaPredicted RBP11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 C10orf90Q96M02 699 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 AMDHD1Q96NU7 426 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 RSPO3Q9BXY4 272 aaPredicted RBP11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 SEMA6CQ9H3T2 930 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 SLC35C2Q9NQQ7 365 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 PRMT8Q9NR22 394 aaPredicted RBP11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 VNN3Q9NY84 501 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 TAS2R7Q9NYW3 318 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 OAZ3Q9UMX2 235 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 LRCH1Q9Y2L9 728 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 PCDHGA2Q9Y5H1 932 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 RNF215Q9Y6U7 377 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 NME6O75414 186 aaPredicted RBP11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 GMNNO75496 209 aa11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 ERAL1O75616 437 aaKnown RBP11.6□□□□□ -0.55
AP003559.1-201ENST00000540906 ZNF682O95780 498 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms