RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 UBE3DQ7Z6J8 389 aa16.03■□□□□ 0.16
CACNA2D4-211ENST00000540728 FAM98AQ8NCA5 519 aaKnown RBP16.03■□□□□ 0.16
CACNA2D4-211ENST00000540728 TMEM52Q8NDY8 209 aa16.03■□□□□ 0.16
CACNA2D4-211ENST00000540728 VMP1Q96GC9 406 aa16.03■□□□□ 0.16
CACNA2D4-211ENST00000540728 CSF3RQ99062 836 aa16.03■□□□□ 0.16
CACNA2D4-211ENST00000540728 MTERF1Q99551 399 aaKnown RBP16.03■□□□□ 0.16
CACNA2D4-211ENST00000540728 MRPL57Q9BQC6 102 aaKnown RBP16.03■□□□□ 0.16
CACNA2D4-211ENST00000540728 DMRT3Q9NQL9 472 aa16.03■□□□□ 0.16
CACNA2D4-211ENST00000540728 KCMF1Q9P0J7 381 aa16.03■□□□□ 0.16
CACNA2D4-211ENST00000540728 XPR1Q9UBH6 696 aa16.03■□□□□ 0.16
CACNA2D4-211ENST00000540728 FBXW2Q9UKT8 454 aa16.03■□□□□ 0.16
CACNA2D4-211ENST00000540728 CLCA3PQ9Y6N3 262 aa16.03■□□□□ 0.16
CACNA2D4-211ENST00000540728 TRBV11-1A0A0K0K1C0 115 aa16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 H0YIV9 168 aa16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 STX16-NPEPL1H3BU86 382 aa16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 SAP18O00422 153 aaKnown RBP16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 STX16O14662 325 aa16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 MAN1A2O60476 641 aa16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 SCELO95171 688 aa16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 SIX3O95343 332 aaPredicted RBP16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 CLDN9O95484 217 aa16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 MLYCDO95822 493 aa16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 LDLRP01130 860 aa16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 CPN2P22792 545 aa16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 CYB561P49447 251 aa16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 CCNG1P51959 295 aa16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 ARFIP1P53367 373 aa16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 MLF1P58340 268 aa16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 SERTAD2Q14140 314 aa16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 ELAVL1Q15717 326 aaKnown RBP16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 TEX35Q5T0J7 233 aa16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 ZNF324BQ6AW86 544 aaPredicted RBP16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 SPINK14Q6IE38 97 aa16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 ZNF793Q6ZN11 406 aa16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 CNPY4Q8N129 248 aa16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 L3MBTL4Q8NA19 623 aa16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 MDS2Q8NDY4 140 aa16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 DAZLQ92904 295 aaKnown RBP16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 MTBPQ96DY7 904 aa16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 SIGLEC12Q96PQ1 595 aa16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 MAPKAP1Q9BPZ7 522 aa16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 ALOXE3Q9BYJ1 711 aa16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 MRPL46Q9H2W6 279 aaKnown RBP16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 NOL11Q9H8H0 719 aaKnown RBP16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 L2HGDHQ9H9P8 463 aa16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 KLHL1Q9NR64 748 aa16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 MS4A12Q9NXJ0 267 aa16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 LRFN1Q9P244 771 aa16.02■□□□□ 0.16
CACNA2D4-211ENST00000540728 TNNI3P19429 210 aa16.01■□□□□ 0.15
CACNA2D4-211ENST00000540728 TPP2P29144 1249 aaPredicted RBP16.01■□□□□ 0.15
CACNA2D4-211ENST00000540728 TLX1P31314 330 aaPredicted RBP16.01■□□□□ 0.15
CACNA2D4-211ENST00000540728 ST13P50502 369 aaKnown RBP16.01■□□□□ 0.15
CACNA2D4-211ENST00000540728 PER3P56645 1201 aa16.01■□□□□ 0.15
CACNA2D4-211ENST00000540728 RPS13P62277 151 aaKnown RBP16.01■□□□□ 0.15
CACNA2D4-211ENST00000540728 SLAMF1Q13291 335 aa16.01■□□□□ 0.15
CACNA2D4-211ENST00000540728 SLC25A25Q6KCM7 469 aa16.01■□□□□ 0.15
CACNA2D4-211ENST00000540728 GFRALQ6UXV0 394 aa16.01■□□□□ 0.15
CACNA2D4-211ENST00000540728 APCDD1LQ8NCL9 501 aa16.01■□□□□ 0.15
CACNA2D4-211ENST00000540728 NCLNQ969V3 563 aa16.01■□□□□ 0.15
CACNA2D4-211ENST00000540728 TMEM125Q96AQ2 219 aa16.01■□□□□ 0.15
CACNA2D4-211ENST00000540728 VTI1BQ9UEU0 232 aa16.01■□□□□ 0.15
CACNA2D4-211ENST00000540728 PHF11Q9UIL8 331 aa16.01■□□□□ 0.15
CACNA2D4-211ENST00000540728 PPIEQ9UNP9 301 aaKnown RBP16.01■□□□□ 0.15
CACNA2D4-211ENST00000540728 RNF11Q9Y3C5 154 aa16.01■□□□□ 0.15
CACNA2D4-211ENST00000540728 IQANK1A0A1B0GTG1 560 aa16■□□□□ 0.15
CACNA2D4-211ENST00000540728 TGFBR3LH3BV60 316 aa16■□□□□ 0.15
CACNA2D4-211ENST00000540728 RIPK2O43353 540 aa16■□□□□ 0.15
CACNA2D4-211ENST00000540728 ZFAND5O76080 213 aa16■□□□□ 0.15
CACNA2D4-211ENST00000540728 SP1P08047 785 aa16■□□□□ 0.15
CACNA2D4-211ENST00000540728 PPP2R1BP30154 601 aa16■□□□□ 0.15
CACNA2D4-211ENST00000540728 HLCSP50747 726 aa16■□□□□ 0.15
CACNA2D4-211ENST00000540728 BIKQ13323 160 aa16■□□□□ 0.15
CACNA2D4-211ENST00000540728 CUL3Q13618 768 aa16■□□□□ 0.15
CACNA2D4-211ENST00000540728 ZRSR2Q15696 482 aaKnown RBP16■□□□□ 0.15
CACNA2D4-211ENST00000540728 MAPKAPK3Q16644 382 aa16■□□□□ 0.15
CACNA2D4-211ENST00000540728 TTC19Q6DKK2 380 aaPredicted RBP16■□□□□ 0.15
CACNA2D4-211ENST00000540728 ADGRD1Q6QNK2 874 aa16■□□□□ 0.15
CACNA2D4-211ENST00000540728 MAMDC2Q7Z304 686 aaPredicted RBP16■□□□□ 0.15
CACNA2D4-211ENST00000540728 RNF175Q8N4F7 328 aa16■□□□□ 0.15
CACNA2D4-211ENST00000540728 TMEM156Q8N614 296 aa16■□□□□ 0.15
CACNA2D4-211ENST00000540728 OR14A16Q8NHC5 309 aa16■□□□□ 0.15
CACNA2D4-211ENST00000540728 THAP3Q8WTV1 239 aaPredicted RBP16■□□□□ 0.15
CACNA2D4-211ENST00000540728 SCMH1Q96GD3 660 aa16■□□□□ 0.15
CACNA2D4-211ENST00000540728 PSD3Q9NYI0 1048 aa16■□□□□ 0.15
CACNA2D4-211ENST00000540728 SEC14L3Q9UDX4 400 aa16■□□□□ 0.15
CACNA2D4-211ENST00000540728 CLDN16Q9Y5I7 305 aa16■□□□□ 0.15
CACNA2D4-211ENST00000540728 NOTCH2Q04721 2471 aa15.99■□□□□ 0.15
CACNA2D4-211ENST00000540728 FOXE1O00358 373 aaPredicted RBP15.99■□□□□ 0.15
CACNA2D4-211ENST00000540728 PLPP1O14494 284 aa15.99■□□□□ 0.15
CACNA2D4-211ENST00000540728 LRRTM2O43300 516 aa15.99■□□□□ 0.15
CACNA2D4-211ENST00000540728 LDB3O75112 727 aa15.99■□□□□ 0.15
CACNA2D4-211ENST00000540728 SLC25A12O75746 678 aa15.99■□□□□ 0.15
CACNA2D4-211ENST00000540728 NEURL1O76050 574 aa15.99■□□□□ 0.15
CACNA2D4-211ENST00000540728 COX7A2P14406 83 aa15.99■□□□□ 0.15
CACNA2D4-211ENST00000540728 TAC1P20366 129 aa15.99■□□□□ 0.15
CACNA2D4-211ENST00000540728 TRHRP34981 398 aaPredicted RBP15.99■□□□□ 0.15
CACNA2D4-211ENST00000540728 BUD31P41223 144 aaPredicted RBP15.99■□□□□ 0.15
CACNA2D4-211ENST00000540728 TDGF1P3P51864 188 aa15.99■□□□□ 0.15
CACNA2D4-211ENST00000540728 KCNK10P57789 538 aa15.99■□□□□ 0.15
CACNA2D4-211ENST00000540728 PMP22Q01453 160 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms