RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 CREB3L4Q8TEY5 395 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 SPDL1Q96EA4 605 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 GBP5Q96PP8 586 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 SERPINI1Q99574 410 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 NPAS2Q99743 824 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 DPH2Q9BQC3 489 aaPredicted RBP10.04□□□□□ -0.8
ATL3-204ENST00000540699 ZNF717Q9BY31 904 aaPredicted RBP10.04□□□□□ -0.8
ATL3-204ENST00000540699 MRPL1Q9BYD6 325 aaKnown RBP10.04□□□□□ -0.8
ATL3-204ENST00000540699 FAM117AQ9C073 453 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 AICDAQ9GZX7 198 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 MMADHCQ9H3L0 296 aaPredicted RBP10.04□□□□□ -0.8
ATL3-204ENST00000540699 CLMPQ9H6B4 373 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 EFCAB1Q9HAE3 211 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 RUVBL1Q9Y265 456 aaKnown RBP10.04□□□□□ -0.8
ATL3-204ENST00000540699 A0A1W2PP18 115 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 DYTNA2CJ06 578 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 MEN1O00255 615 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 MRASO14807 208 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 AIM2O14862 343 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 DSCR3O14972 297 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 P2RX6O15547 441 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 EEDO75530 441 aaKnown RBP10.03□□□□□ -0.8
ATL3-204ENST00000540699 CLEC3AO75596 197 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 KLHL18O94889 574 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 MED26O95402 600 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 TGFB1P01137 390 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 NTRK1P04629 796 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 PTX3P26022 381 aaPredicted RBP10.03□□□□□ -0.8
ATL3-204ENST00000540699 TIA1P31483 386 aaKnown RBP eCLIP10.03□□□□□ -0.8
ATL3-204ENST00000540699 STAT5AP42229 794 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 RAP1GDS1P52306 607 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 POLR2JP52435 117 aaKnown RBP10.03□□□□□ -0.8
ATL3-204ENST00000540699 CXADRP78310 365 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 MXRA7P84157 204 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 TLR1Q15399 786 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 TGIF1Q15583 401 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 FAM214AQ32MH5 1076 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 VPS26BQ4G0F5 336 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 DEPDC1Q5TB30 811 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 PCSK4Q6UW60 755 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 RIMKLAQ8IXN7 391 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 FAM9CQ8IZT9 166 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 PGAM4Q8N0Y7 254 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 ZNF843Q8N446 348 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 TBC1D19Q8N5T2 526 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 CAMKVQ8NCB2 501 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 GLB1L3Q8NCI6 653 aaPredicted RBP10.03□□□□□ -0.8
ATL3-204ENST00000540699 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.03□□□□□ -0.8
ATL3-204ENST00000540699 NT5CQ8TCD5 201 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 NUDT8Q8WV74 236 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 KCNE4Q8WWG9 221 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 RERGQ96A58 199 aaPredicted RBP10.03□□□□□ -0.8
ATL3-204ENST00000540699 MVB12AQ96EY5 273 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 NAF1Q96HR8 494 aaKnown RBP10.03□□□□□ -0.8
ATL3-204ENST00000540699 C10orf90Q96M02 699 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 RAB3IPQ96QF0 476 aaPredicted RBP10.03□□□□□ -0.8
ATL3-204ENST00000540699 NDC1Q9BTX1 674 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 EBPLQ9BY08 206 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 DPY30Q9C005 99 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 OR51B5Q9H339 312 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 WDR70Q9NW82 654 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 NMRK1Q9NWW6 199 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 MAP10Q9P2G4 905 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 BAIAP2L1Q9UHR4 511 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 PADI1Q9ULC6 663 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 NDUFAF1Q9Y375 327 aa10.03□□□□□ -0.8
ATL3-204ENST00000540699 NUP210LQ5VU65 1888 aa10.02□□□□□ -0.8
ATL3-204ENST00000540699 A0A088AWK7 358 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 A0A1B0GX78 115 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 HYKKA2RU49 373 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 ANKDD1BA6NHY2 528 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 FXYD1O00168 92 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 PLPP1O14494 284 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 OR1F1O43749 312 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 PCDH7O60245 1069 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 PRMT3O60678 531 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 SH3BGRLO75368 114 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 PGM1P36871 562 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 CLNS1AP54105 237 aaKnown RBP10.02□□□□□ -0.81
ATL3-204ENST00000540699 KCNK10P57789 538 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 CYP4F2P78329 520 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 HYAL2Q12891 473 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 PWP1Q13610 501 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 FAM53BQ14153 422 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 MUM1Q2TAK8 710 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 HKDC1Q2TB90 917 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 ADPRMQ3LIE5 342 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 TIGD2Q4W5G0 525 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 KHDRBS2Q5VWX1 349 aaKnown RBP10.02□□□□□ -0.81
ATL3-204ENST00000540699 TMEM214Q6NUQ4 689 aaKnown RBP10.02□□□□□ -0.81
ATL3-204ENST00000540699 PGM2L1Q6PCE3 622 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 C16orf89Q6UX73 402 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 COMMD6Q7Z4G1 85 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 ASPGQ86U10 573 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 DEFB107AQ8IZN7 70 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 DPP10Q8N608 796 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 KRTCAP2Q8N6L1 136 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 TTC29Q8NA56 475 aaPredicted RBP10.02□□□□□ -0.81
ATL3-204ENST00000540699 FAM13CQ8NE31 585 aa10.02□□□□□ -0.81
ATL3-204ENST00000540699 TRPV3Q8NET8 790 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms