RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 ARRDC3Q96B67 414 aa13.03□□□□□ -0.32
BNIP3-202ENST00000540159 CCNB1IP1Q9NPC3 277 aa13.03□□□□□ -0.32
BNIP3-202ENST00000540159 SCHIP1Q9P0W5 487 aaPredicted RBP13.03□□□□□ -0.32
BNIP3-202ENST00000540159 PADI2Q9Y2J8 665 aa13.03□□□□□ -0.32
BNIP3-202ENST00000540159 KLHL20Q9Y2M5 609 aa13.03□□□□□ -0.32
BNIP3-202ENST00000540159 FFAR1O14842 300 aa13.02□□□□□ -0.32
BNIP3-202ENST00000540159 CDK1P06493 297 aa13.02□□□□□ -0.32
BNIP3-202ENST00000540159 C8orf89P0DMQ9 161 aa13.02□□□□□ -0.32
BNIP3-202ENST00000540159 HOXB3P14651 431 aaPredicted RBP13.02□□□□□ -0.32
BNIP3-202ENST00000540159 TGM1P22735 817 aa13.02□□□□□ -0.32
BNIP3-202ENST00000540159 OPRD1P41143 372 aa13.02□□□□□ -0.32
BNIP3-202ENST00000540159 SEC23BQ15437 767 aa13.02□□□□□ -0.32
BNIP3-202ENST00000540159 TEAD4Q15561 434 aa13.02□□□□□ -0.32
BNIP3-202ENST00000540159 TPRG1LQ5T0D9 272 aa13.02□□□□□ -0.32
BNIP3-202ENST00000540159 C10orf62Q5T681 223 aaPredicted RBP13.02□□□□□ -0.32
BNIP3-202ENST00000540159 TRIM40Q6P9F5 258 aa13.02□□□□□ -0.32
BNIP3-202ENST00000540159 TMC5Q6UXY8 1006 aa13.02□□□□□ -0.32
BNIP3-202ENST00000540159 LACC1Q8IV20 430 aa13.02□□□□□ -0.32
BNIP3-202ENST00000540159 OR52N2Q8NGI0 321 aa13.02□□□□□ -0.32
BNIP3-202ENST00000540159 TRIM43Q96BQ3 446 aaPredicted RBP13.02□□□□□ -0.32
BNIP3-202ENST00000540159 NUS1Q96E22 293 aa13.02□□□□□ -0.32
BNIP3-202ENST00000540159 FCRL1Q96LA6 429 aa13.02□□□□□ -0.32
BNIP3-202ENST00000540159 CNPPD1Q9BV87 410 aa13.02□□□□□ -0.32
BNIP3-202ENST00000540159 CEP44Q9C0F1 390 aa13.02□□□□□ -0.32
BNIP3-202ENST00000540159 RC3H2Q9HBD1 1191 aaKnown RBP13.02□□□□□ -0.32
BNIP3-202ENST00000540159 ATAD3AQ9NVI7 634 aa13.02□□□□□ -0.32
BNIP3-202ENST00000540159 TEX10Q9NXF1 929 aaPredicted RBP13.02□□□□□ -0.32
BNIP3-202ENST00000540159 KLHL42Q9P2K6 505 aa13.02□□□□□ -0.32
BNIP3-202ENST00000540159 POU2F3Q9UKI9 436 aa13.02□□□□□ -0.32
BNIP3-202ENST00000540159 TBX21Q9UL17 535 aa13.02□□□□□ -0.32
BNIP3-202ENST00000540159 ZNF106Q9H2Y7 1883 aaKnown RBP13.02□□□□□ -0.32
BNIP3-202ENST00000540159 M0R3H8 397 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 ZW10O43264 779 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 UGDHO60701 494 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 SEMA7AO75326 666 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 MAPK12P53778 367 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 PNLIPRP1P54315 467 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 DSTNP60981 165 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 CXCR4P61073 352 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 PRAMEF14Q5SWL7 426 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 PRAMEF13Q5VWM6 474 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 VN1R5Q7Z5H4 357 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 GPR65Q8IYL9 337 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 SLC34A3Q8N130 599 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 ARSGQ96EG1 525 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 TMEM19Q96HH6 336 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 PAWRQ96IZ0 340 aaKnown RBP13.02□□□□□ -0.33
BNIP3-202ENST00000540159 BRF2Q9HAW0 419 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.02□□□□□ -0.33
BNIP3-202ENST00000540159 OR1A2Q9Y585 309 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 WDR87Q6ZQQ6 2873 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 A0A1W2PS29 197 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 PLPP1O14494 284 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 SPINT1O43278 529 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 FRS3O43559 492 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 KIAA0513O60268 411 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 GPR37L1O60883 481 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 ENTPD6O75354 484 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 ERAL1O75616 437 aaKnown RBP13.02□□□□□ -0.33
BNIP3-202ENST00000540159 CCNB2O95067 398 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 SERPINB1P30740 379 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 CTNNB1P35222 781 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 PIK3CBP42338 1070 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 VEGFBP49765 207 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 DAB2P98082 770 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 NXPE4Q6UWF7 544 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 ANKRD33Q7Z3H0 272 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 ADGRF3Q8IZF5 1079 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 SLC38A5Q8WUX1 472 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 S100ZQ8WXG8 99 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 MYDGFQ969H8 173 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 COL21A1Q96P44 957 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 PITX2Q99697 317 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 CDADC1Q9BWV3 514 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 CERS4Q9HA82 394 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 PALMDQ9NP74 551 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 OSGIN1Q9UJX0 560 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 IFT52Q9Y366 437 aa13.02□□□□□ -0.33
BNIP3-202ENST00000540159 DENND4CQ5VZ89 1909 aa13.01□□□□□ -0.33
BNIP3-202ENST00000540159 AQP9O43315 295 aa13.01□□□□□ -0.33
BNIP3-202ENST00000540159 AP2A2O94973 939 aa13.01□□□□□ -0.33
BNIP3-202ENST00000540159 IFNW1P05000 195 aa13.01□□□□□ -0.33
BNIP3-202ENST00000540159 SYPL1Q16563 259 aa13.01□□□□□ -0.33
BNIP3-202ENST00000540159 LRRC26Q2I0M4 334 aa13.01□□□□□ -0.33
BNIP3-202ENST00000540159 MSANTD1Q6ZTZ1 278 aa13.01□□□□□ -0.33
BNIP3-202ENST00000540159 DPPA4Q7L190 304 aa13.01□□□□□ -0.33
BNIP3-202ENST00000540159 SHFQ7M4L6 423 aa13.01□□□□□ -0.33
BNIP3-202ENST00000540159 ANKRD53Q8N9V6 530 aa13.01□□□□□ -0.33
BNIP3-202ENST00000540159 POF1BQ8WVV4 589 aa13.01□□□□□ -0.33
BNIP3-202ENST00000540159 RSPRY1Q96DX4 576 aa13.01□□□□□ -0.33
BNIP3-202ENST00000540159 DTD2Q96FN9 168 aa13.01□□□□□ -0.33
BNIP3-202ENST00000540159 VMP1Q96GC9 406 aa13.01□□□□□ -0.33
BNIP3-202ENST00000540159 PHOX2BQ99453 314 aa13.01□□□□□ -0.33
BNIP3-202ENST00000540159 NLNQ9BYT8 704 aa13.01□□□□□ -0.33
BNIP3-202ENST00000540159 SYNDIG1LA6NDD5 238 aa13.01□□□□□ -0.33
BNIP3-202ENST00000540159 A8MV72 311 aaPredicted RBP13.01□□□□□ -0.33
BNIP3-202ENST00000540159 CYP17A1P05093 508 aa13.01□□□□□ -0.33
BNIP3-202ENST00000540159 RPLP0P05388 317 aaKnown RBP13.01□□□□□ -0.33
BNIP3-202ENST00000540159 CLTBP09497 229 aa13.01□□□□□ -0.33
BNIP3-202ENST00000540159 RCVRNP35243 200 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms