RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 IP6K3Q96PC2 410 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 CSF3RQ99062 836 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 MAPKAP1Q9BPZ7 522 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 C20orf27Q9GZN8 174 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 ACBD3Q9H3P7 528 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 DDX31Q9H8H2 851 aaKnown RBP6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 EML4Q9HC35 981 aaKnown RBP6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 LYRM4Q9HD34 91 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 PRM3Q9NNZ6 103 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 NKIRAS1Q9NYS0 192 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 KCMF1Q9P0J7 381 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 MKL2Q9ULH7 1088 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 SLC12A4Q9UP95 1085 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 MAN2B2Q9Y2E5 1009 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 DNAJC15Q9Y5T4 150 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 PTGDR2Q9Y5Y4 395 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 KCNMB2Q9Y691 235 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 MED13Q9UHV7 2174 aa6.57□□□□□ -1.36
LPCAT3-209ENST00000540060 TLN1Q9Y490 2541 aaKnown RBP6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 SMG1Q96Q15 3661 aaKnown RBP6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 PIEZO2Q9H5I5 2752 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 LOC102723996A0A087X1L8 192 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 IGKV3D-11A0A0A0MRZ8 115 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 IGHV1-45A0A0A0MS14 117 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 OR2W5A6NFC9 320 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 ARGFXA6NJG6 315 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 NPIPB8E9PQR5 432 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 FAM227AF5H4B4 570 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 TGFBR3LH3BV60 316 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 PSMD12O00232 456 aaPredicted RBP6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 ITM2AO43736 263 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 TMPRSS11DO60235 418 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 ALOX12BO75342 701 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 RSL1D1O76021 490 aaKnown RBP6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 SNUPNO95149 360 aaKnown RBP6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 HSPA4LO95757 839 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 GBAP04062 536 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 FGF4P08620 206 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 C8orf89P0DMQ9 161 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 COX6A1P12074 109 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 ACPPP15309 386 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 MAOAP21397 527 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 PRPH2P23942 346 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 SLC1A6P48664 564 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 EMP2P54851 167 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 ABCE1P61221 599 aaKnown RBP6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 HMGCS1Q01581 520 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 RHDQ02161 417 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 TNFRSF17Q02223 184 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 BST1Q10588 318 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 TBR1Q16650 682 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 DEFB109BQ30KR1 87 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 SPIN4Q56A73 249 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 XKR7Q5GH72 579 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 MFSD4BQ5TF39 518 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 FAAH2Q6GMR7 532 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 BORAQ6PGQ7 559 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 SCIMPQ6UWF3 145 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 KIRREL2Q6UWL6 708 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 LANCL3Q6ZV70 420 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 TRIM46Q7Z4K8 759 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 APLFQ8IW19 511 aaPredicted RBP6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 SCUBE1Q8IWY4 988 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 ZNF595Q8IYB9 648 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 C1orf52Q8N6N3 182 aaKnown RBP6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 ZNF781Q8N8C0 355 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 OR11G2Q8NGC1 345 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 OR2T11Q8NH01 316 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 PPP1R14CQ8TAE6 165 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 RAB3IL1Q8TBN0 382 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 AGR3Q8TD06 166 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 CHTF18Q8WVB6 975 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 TWIST2Q8WVJ9 160 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 TTC9Q92623 222 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 EXTL1Q92935 676 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 TSLPQ969D9 159 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 C8orf44Q96CB5 159 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 C11orf24Q96F05 449 aaPredicted RBP6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 SORT1Q99523 831 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 PAIP2Q9BPZ3 127 aaKnown RBP6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 TRIM55Q9BYV6 548 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 TUBB1Q9H4B7 451 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 ZNF395Q9H8N7 513 aaPredicted RBP6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 PRDM9Q9NQV7 894 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 NMRK1Q9NWW6 199 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 LYARQ9NX58 379 aaKnown RBP6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 TEX10Q9NXF1 929 aaPredicted RBP6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 P4HTMQ9NXG6 502 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 VPS29Q9UBQ0 182 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 ZDHHC2Q9UIJ5 367 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 PHF11Q9UIL8 331 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 HAO1Q9UJM8 370 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 FBXL4Q9UKA2 621 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 ADAM29Q9UKF5 820 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 FBXW2Q9UKT8 454 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 MRPS33Q9Y291 106 aaKnown RBP6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 FIS1Q9Y3D6 152 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 ATG4BQ9Y4P1 393 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 MMACHCQ9Y4U1 282 aa6.56□□□□□ -1.36
LPCAT3-209ENST00000540060 CCL27Q9Y4X3 112 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms