RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 MGLLQ99685 303 aa9.58□□□□□ -0.88
TRAF1-202ENST00000540010 GSDMCQ9BYG8 508 aa9.58□□□□□ -0.88
TRAF1-202ENST00000540010 NFKBIL1Q9UBC1 381 aaPredicted RBP9.58□□□□□ -0.88
TRAF1-202ENST00000540010 DLGAP4Q9Y2H0 992 aa9.58□□□□□ -0.88
TRAF1-202ENST00000540010 TBC1D3DA0A087WVF3 549 aa9.58□□□□□ -0.88
TRAF1-202ENST00000540010 TBC1D3IA0A087WXS9 549 aa9.58□□□□□ -0.88
TRAF1-202ENST00000540010 TBC1D3EA0A087X179 549 aa9.58□□□□□ -0.88
TRAF1-202ENST00000540010 TBC1D3KA0A087X1G2 549 aa9.58□□□□□ -0.88
TRAF1-202ENST00000540010 TBC1D3FA6NER0 549 aaPredicted RBP9.58□□□□□ -0.88
TRAF1-202ENST00000540010 SOBPA7XYQ1 873 aa9.58□□□□□ -0.88
TRAF1-202ENST00000540010 TBC1D3LB9A6J9 549 aa9.58□□□□□ -0.88
TRAF1-202ENST00000540010 TBC1D3HP0C7X1 549 aa9.58□□□□□ -0.88
TRAF1-202ENST00000540010 CD9P21926 228 aa9.58□□□□□ -0.88
TRAF1-202ENST00000540010 PTX3P26022 381 aaPredicted RBP9.58□□□□□ -0.88
TRAF1-202ENST00000540010 OMPP47874 163 aa9.58□□□□□ -0.88
TRAF1-202ENST00000540010 AP1S2P56377 157 aa9.58□□□□□ -0.88
TRAF1-202ENST00000540010 UGT8Q16880 541 aa9.58□□□□□ -0.88
TRAF1-202ENST00000540010 HLA-DQA1Q5Y7H0 255 aa9.58□□□□□ -0.88
TRAF1-202ENST00000540010 TBC1D3GQ6DHY5 549 aa9.58□□□□□ -0.88
TRAF1-202ENST00000540010 TBC1D3CQ6IPX1 549 aa9.58□□□□□ -0.88
TRAF1-202ENST00000540010 FAM129CQ86XR2 697 aa9.58□□□□□ -0.88
TRAF1-202ENST00000540010 MARCH9Q86YJ5 346 aa9.58□□□□□ -0.88
TRAF1-202ENST00000540010 TBC1D3Q8IZP1 549 aaPredicted RBP9.58□□□□□ -0.88
TRAF1-202ENST00000540010 CLECL1Q8IZS7 167 aa9.58□□□□□ -0.88
TRAF1-202ENST00000540010 C9orf43Q8TAL5 461 aaPredicted RBP9.58□□□□□ -0.88
TRAF1-202ENST00000540010 ZCCHC10Q8TBK6 192 aa9.58□□□□□ -0.88
TRAF1-202ENST00000540010 NETO1Q8TDF5 533 aa9.58□□□□□ -0.88
TRAF1-202ENST00000540010 GEMIN6Q8WXD5 167 aaKnown RBP9.58□□□□□ -0.88
TRAF1-202ENST00000540010 FGF13Q92913 245 aa9.58□□□□□ -0.88
TRAF1-202ENST00000540010 ZBED6CLQ96FA7 236 aaPredicted RBP9.58□□□□□ -0.88
TRAF1-202ENST00000540010 SLC35G5Q96KT7 338 aa9.58□□□□□ -0.88
TRAF1-202ENST00000540010 SPACA7Q96KW9 195 aa9.58□□□□□ -0.88
TRAF1-202ENST00000540010 RDH12Q96NR8 316 aa9.58□□□□□ -0.88
TRAF1-202ENST00000540010 LYSMD1Q96S90 227 aa9.58□□□□□ -0.88
TRAF1-202ENST00000540010 KCNH6Q9H252 994 aa9.58□□□□□ -0.88
TRAF1-202ENST00000540010 NEK6Q9HC98 313 aa9.58□□□□□ -0.88
TRAF1-202ENST00000540010 ZDHHC4Q9NPG8 344 aa9.58□□□□□ -0.88
TRAF1-202ENST00000540010 CCDC59Q9P031 241 aaKnown RBP9.58□□□□□ -0.88
TRAF1-202ENST00000540010 MKLN1Q9UL63 735 aa9.58□□□□□ -0.88
TRAF1-202ENST00000540010 A0A1B0GTW7 788 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 GLOD5A6NK44 160 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 GAPDHSO14556 408 aaPredicted RBP9.57□□□□□ -0.88
TRAF1-202ENST00000540010 SCN2BO60939 215 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 CA5AP35218 305 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 DCTP40126 519 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 SLC6A11P48066 632 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 HNMTP50135 292 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 LIPKQ5VXJ0 399 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 LIN54Q6MZP7 749 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 ZNF613Q6PF04 617 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 ARL9Q6T311 187 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 FAM220AQ7Z4H9 259 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 IGFN1Q86VF2 1251 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 ZNF655Q8N720 491 aaPredicted RBP9.57□□□□□ -0.88
TRAF1-202ENST00000540010 PIGXQ8TBF5 258 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 RFKQ969G6 155 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 ECHDC3Q96DC8 303 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 TTYH1Q9H313 450 aaPredicted RBP9.57□□□□□ -0.88
TRAF1-202ENST00000540010 COMMD9Q9P000 198 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 MAN2B2Q9Y2E5 1009 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 HCN4Q9Y3Q4 1203 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 OARD1Q9Y530 152 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 NOTOA8MTQ0 251 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 HIST1H2ABP04908 130 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 PCCBP05166 539 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 SRPRAP08240 638 aaKnown RBP9.57□□□□□ -0.88
TRAF1-202ENST00000540010 NT5EP21589 574 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 CD72P21854 359 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 PSMA3P25788 255 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 MAT2AP31153 395 aaKnown RBP9.57□□□□□ -0.88
TRAF1-202ENST00000540010 MLLT1Q03111 559 aaPredicted RBP9.57□□□□□ -0.88
TRAF1-202ENST00000540010 TBRG1Q3YBR2 411 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 RASSF6Q6ZTQ3 369 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 HIST3H2AQ7L7L0 130 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 GRPEL2Q8TAA5 225 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 HIST1H2ACQ93077 130 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 PDLIM5Q96HC4 596 aaKnown RBP9.57□□□□□ -0.88
TRAF1-202ENST00000540010 MCCC1Q96RQ3 725 aaPredicted RBP9.57□□□□□ -0.88
TRAF1-202ENST00000540010 SLC29A3Q9BZD2 475 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 OCEL1Q9H607 264 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 DIABLOQ9NR28 239 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 AGPAT4Q9NRZ5 378 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 SPATA7Q9P0W8 599 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 TCRBV3S1A0A5B6 114 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 C5orf67F2Z3F1 127 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 NDUFB5O43674 189 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 TIMP2P16035 220 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 ZNF26P17031 533 aaPredicted RBP9.57□□□□□ -0.88
TRAF1-202ENST00000540010 CELP19835 753 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 GSTM2P28161 218 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 STARP49675 285 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 MLLT10P55197 1068 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 LARS2Q15031 903 aaKnown RBP9.57□□□□□ -0.88
TRAF1-202ENST00000540010 SHHQ15465 462 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 KLHL22Q53GT1 634 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 C10orf62Q5T681 223 aaPredicted RBP9.57□□□□□ -0.88
TRAF1-202ENST00000540010 SBSNQ6UWP8 590 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 CHERPQ8IWX8 916 aaKnown RBP9.57□□□□□ -0.88
TRAF1-202ENST00000540010 SLC7A5P1Q8MH63 180 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 PELI3Q8N2H9 469 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms