RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 ZNF517Q6ZMY9 492 aaPredicted RBP9.23□□□□□ -0.93
CDH13-204ENST00000539548 Q6ZVL8 140 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 VN1R5Q7Z5H4 357 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 TAGAPQ8N103 731 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 IL17RCQ8NAC3 791 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 CHST14Q8NCH0 376 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 WDR48Q8TAF3 677 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 GPR151Q8TDV0 419 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 APOBEC4Q8WW27 367 aaKnown RBP9.23□□□□□ -0.93
CDH13-204ENST00000539548 FOXJ1Q92949 421 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 NEDD4LQ96PU5 975 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 IL4I1Q96RQ9 567 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 UCK2Q9BZX2 261 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 EXOSC4Q9NPD3 245 aaKnown RBP9.23□□□□□ -0.93
CDH13-204ENST00000539548 MRPL17Q9NRX2 175 aaKnown RBP9.23□□□□□ -0.93
CDH13-204ENST00000539548 NFKBIL1Q9UBC1 381 aaPredicted RBP9.23□□□□□ -0.93
CDH13-204ENST00000539548 RHCGQ9UBD6 479 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 FAM8A1Q9UBU6 413 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 ACSL6Q9UKU0 697 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 STUB1Q9UNE7 303 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 MGAT4BQ9UQ53 548 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 INSL5Q9Y5Q6 135 aa9.23□□□□□ -0.93
CDH13-204ENST00000539548 IQCMA0A1B0GVH7 501 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 A0A1W2PRB8 838 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 HMX3A6NHT5 357 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 CENPXA8MT69 81 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 H3BM21 787 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 GRM6O15303 877 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 RGS5O15539 181 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 HOXC11O43248 304 aaPredicted RBP9.22□□□□□ -0.93
CDH13-204ENST00000539548 TSPAN6O43657 245 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 CSO75390 466 aaKnown RBP9.22□□□□□ -0.93
CDH13-204ENST00000539548 C1GALT1C1LP0DN25 315 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 NPPBP16860 134 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 UQCRC2P22695 453 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 HLA-FP30511 346 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 RPS5P46782 204 aaKnown RBP9.22□□□□□ -0.93
CDH13-204ENST00000539548 PREPP48147 710 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 LIM2P55344 173 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 DSTNP60981 165 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 PSPHP78330 225 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 CAP1Q01518 475 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 ZNF79Q15937 498 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 DUSP7Q16829 419 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 PRSS53Q2L4Q9 553 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 C12orf73Q69YU5 71 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 REEP3Q6NUK4 255 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 BRAT1Q6PJG6 821 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 TMPRSS11BQ86T26 416 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 CMTM8Q8IZV2 173 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 NANOGP1Q8N7R0 232 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 RASGEF1AQ8N9B8 481 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 FAM181AQ8N9Y4 354 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 FBXO15Q8NCQ5 510 aaPredicted RBP9.22□□□□□ -0.93
CDH13-204ENST00000539548 PROKR2Q8NFJ6 384 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 OR5AK3PQ8NH89 298 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 BTN2A2Q8WVV5 523 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 PDXPQ96GD0 296 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 FOPNLQ96NB1 174 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 ZSCAN5AQ9BUG6 496 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 EFCAB11Q9BUY7 163 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 RIOK2Q9BVS4 552 aaKnown RBP9.22□□□□□ -0.93
CDH13-204ENST00000539548 MND1Q9BWT6 205 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 SRRQ9GZT4 340 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 TRIM39Q9HCM9 518 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 DMRT3Q9NQL9 472 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 NDUFB11Q9NX14 153 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 RNF186Q9NXI6 227 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 GULP1Q9UBP9 304 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 CLEC2DQ9UHP7 191 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 SLC25A13Q9UJS0 675 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 TMCC3Q9ULS5 477 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 RPL36Q9Y3U8 105 aaKnown RBP9.22□□□□□ -0.93
CDH13-204ENST00000539548 TRBV4-1A0A0J9YWV2 114 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 HYKKA2RU49 373 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 ANKRD34BA5PLL1 514 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 WASH3PC4AMC7 463 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 AP3D1O14617 1153 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 ATG13O75143 517 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 MFN2O95140 757 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 LGI1O95970 557 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 GBAP04062 536 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 CKMP06732 381 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 CTSAP10619 480 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 CKMT1AP12532 417 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 IL7P13232 177 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 SOX3P41225 446 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 TM4SF4P48230 202 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 CTSCP53634 463 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 TAS2R50P59544 299 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 RUNX1T1Q06455 604 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 SCN1BQ07699 218 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 MLLT11Q13015 90 aaPredicted RBP9.22□□□□□ -0.93
CDH13-204ENST00000539548 LARS2Q15031 903 aaKnown RBP9.22□□□□□ -0.93
CDH13-204ENST00000539548 BAK1Q16611 211 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 OCLNQ16625 522 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 ZFP69Q49AA0 526 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 HENMT1Q5T8I9 393 aaKnown RBP9.22□□□□□ -0.93
CDH13-204ENST00000539548 HIST2H2AA3Q6FI13 130 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 SLC34A3Q8N130 599 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms