RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 KCMF1Q9P0J7 381 aa20.68■□□□□ 0.9
SCARB1-206ENST00000539320 ZNF835Q9Y2P0 537 aa20.68■□□□□ 0.9
SCARB1-206ENST00000539320 ANGPTL3Q9Y5C1 460 aa20.68■□□□□ 0.9
SCARB1-206ENST00000539320 CLCA3PQ9Y6N3 262 aa20.68■□□□□ 0.9
SCARB1-206ENST00000539320 SPACA6W5XKT8 324 aa20.68■□□□□ 0.9
SCARB1-206ENST00000539320 HMX2A2RU54 273 aa20.67■□□□□ 0.9
SCARB1-206ENST00000539320 ASNA1O43681 348 aa20.67■□□□□ 0.9
SCARB1-206ENST00000539320 PRKNO60260 465 aaPredicted RBP20.67■□□□□ 0.9
SCARB1-206ENST00000539320 SH3BGRLO75368 114 aa20.67■□□□□ 0.9
SCARB1-206ENST00000539320 TGFB1P01137 390 aa20.67■□□□□ 0.9
SCARB1-206ENST00000539320 GFAPP14136 432 aa20.67■□□□□ 0.9
SCARB1-206ENST00000539320 EPB42P16452 691 aa20.67■□□□□ 0.9
SCARB1-206ENST00000539320 HIST1H1TP22492 207 aaPredicted RBP20.67■□□□□ 0.9
SCARB1-206ENST00000539320 PHBP35232 272 aa20.67■□□□□ 0.9
SCARB1-206ENST00000539320 SERPINB8P50452 374 aa20.67■□□□□ 0.9
SCARB1-206ENST00000539320 SSR4P51571 173 aa20.67■□□□□ 0.9
SCARB1-206ENST00000539320 GTF3C1Q12789 2109 aa20.67■□□□□ 0.9
SCARB1-206ENST00000539320 DDX39BQ13838 428 aaKnown RBP20.67■□□□□ 0.9
SCARB1-206ENST00000539320 SETDB1Q15047 1291 aa20.67■□□□□ 0.9
SCARB1-206ENST00000539320 RNFT1Q5M7Z0 435 aa20.67■□□□□ 0.9
SCARB1-206ENST00000539320 CHSY3Q70JA7 882 aa20.67■□□□□ 0.9
SCARB1-206ENST00000539320 MRGPRGQ86SM5 289 aa20.67■□□□□ 0.9
SCARB1-206ENST00000539320 SPPL2CQ8IUH8 684 aa20.67■□□□□ 0.9
SCARB1-206ENST00000539320 TEX9Q8N6V9 391 aa20.67■□□□□ 0.9
SCARB1-206ENST00000539320 OR14A16Q8NHC5 309 aa20.67■□□□□ 0.9
SCARB1-206ENST00000539320 CMTM7Q96FZ5 175 aa20.67■□□□□ 0.9
SCARB1-206ENST00000539320 C16orf45Q96MC5 204 aaPredicted RBP20.67■□□□□ 0.9
SCARB1-206ENST00000539320 MAPKAP1Q9BPZ7 522 aa20.67■□□□□ 0.9
SCARB1-206ENST00000539320 ALOXE3Q9BYJ1 711 aa20.67■□□□□ 0.9
SCARB1-206ENST00000539320 NINJ2Q9NZG7 142 aa20.67■□□□□ 0.9
SCARB1-206ENST00000539320 KLF2Q9Y5W3 355 aaPredicted RBP20.67■□□□□ 0.9
SCARB1-206ENST00000539320 ARHGAP10A1A4S6 786 aa20.66■□□□□ 0.9
SCARB1-206ENST00000539320 HNRNPRO43390 633 aaKnown RBP20.66■□□□□ 0.9
SCARB1-206ENST00000539320 ABOP16442 354 aa20.66■□□□□ 0.9
SCARB1-206ENST00000539320 SERTAD2Q14140 314 aa20.66■□□□□ 0.9
SCARB1-206ENST00000539320 WHAMMP3Q1A5X7 153 aa20.66■□□□□ 0.9
SCARB1-206ENST00000539320 AP5B1Q2VPB7 878 aa20.66■□□□□ 0.9
SCARB1-206ENST00000539320 KHDRBS2Q5VWX1 349 aaKnown RBP20.66■□□□□ 0.9
SCARB1-206ENST00000539320 KLC3Q6P597 504 aa20.66■□□□□ 0.9
SCARB1-206ENST00000539320 CEP128Q6ZU80 1094 aa20.66■□□□□ 0.9
SCARB1-206ENST00000539320 MYLK4Q86YV6 388 aaPredicted RBP20.66■□□□□ 0.9
SCARB1-206ENST00000539320 OR51B5Q9H339 312 aa20.66■□□□□ 0.9
SCARB1-206ENST00000539320 ACSS3Q9H6R3 686 aa20.66■□□□□ 0.9
SCARB1-206ENST00000539320 VTI1BQ9UEU0 232 aa20.66■□□□□ 0.9
SCARB1-206ENST00000539320 MTRF1LQ9UGC7 380 aaKnown RBP20.66■□□□□ 0.9
SCARB1-206ENST00000539320 ADGRE2Q9UHX3 823 aa20.66■□□□□ 0.9
SCARB1-206ENST00000539320 YARS2Q9Y2Z4 477 aaKnown RBP20.66■□□□□ 0.9
SCARB1-206ENST00000539320 PKDREJQ9NTG1 2253 aa20.66■□□□□ 0.9
SCARB1-206ENST00000539320 NCOA6Q14686 2063 aaPredicted RBP20.65■□□□□ 0.9
SCARB1-206ENST00000539320 A0A096LPK6 155 aa20.65■□□□□ 0.9
SCARB1-206ENST00000539320 MYOCOSA0A1B0GUC4 107 aa20.65■□□□□ 0.9
SCARB1-206ENST00000539320 TFECO14948 347 aaPredicted RBP20.65■□□□□ 0.9
SCARB1-206ENST00000539320 LDB3O75112 727 aa20.65■□□□□ 0.9
SCARB1-206ENST00000539320 URI1O94763 535 aaPredicted RBP20.65■□□□□ 0.9
SCARB1-206ENST00000539320 ESRRAP11474 423 aaPredicted RBP20.65■□□□□ 0.9
SCARB1-206ENST00000539320 RAP1GDS1P52306 607 aa20.65■□□□□ 0.9
SCARB1-206ENST00000539320 HSF1Q00613 529 aa20.65■□□□□ 0.9
SCARB1-206ENST00000539320 ACAP2Q15057 778 aa20.65■□□□□ 0.9
SCARB1-206ENST00000539320 PFKFB4Q16877 469 aa20.65■□□□□ 0.9
SCARB1-206ENST00000539320 HSDL2Q6YN16 418 aa20.65■□□□□ 0.9
SCARB1-206ENST00000539320 BNC2Q6ZN30 1099 aaPredicted RBP20.65■□□□□ 0.9
SCARB1-206ENST00000539320 SULF2Q8IWU5 870 aa20.65■□□□□ 0.9
SCARB1-206ENST00000539320 GPALPP1Q8IXQ4 340 aa20.65■□□□□ 0.9
SCARB1-206ENST00000539320 MORN4Q8NDC4 146 aa20.65■□□□□ 0.9
SCARB1-206ENST00000539320 HUS1BQ8NHY5 278 aa20.65■□□□□ 0.9
SCARB1-206ENST00000539320 MARVELD3Q96A59 401 aa20.65■□□□□ 0.9
SCARB1-206ENST00000539320 CENPKQ9BS16 269 aa20.65■□□□□ 0.9
SCARB1-206ENST00000539320 ACTR8Q9H981 624 aa20.65■□□□□ 0.9
SCARB1-206ENST00000539320 TIMMDC1Q9NPL8 285 aa20.65■□□□□ 0.9
SCARB1-206ENST00000539320 DMRT3Q9NQL9 472 aa20.65■□□□□ 0.9
SCARB1-206ENST00000539320 CRYBG3Q68DQ2 2970 aa20.64■□□□□ 0.9
SCARB1-206ENST00000539320 A8MVJ9 347 aa20.64■□□□□ 0.89
SCARB1-206ENST00000539320 KLRC4-KLRK1H3BQV0 150 aa20.64■□□□□ 0.89
SCARB1-206ENST00000539320 SAP18O00422 153 aaKnown RBP20.64■□□□□ 0.89
SCARB1-206ENST00000539320 PEX1O43933 1283 aa20.64■□□□□ 0.89
SCARB1-206ENST00000539320 KLHL2O95198 593 aa20.64■□□□□ 0.89
SCARB1-206ENST00000539320 ALDOAP04075 364 aaKnown RBP20.64■□□□□ 0.89
SCARB1-206ENST00000539320 CPN2P22792 545 aa20.64■□□□□ 0.89
SCARB1-206ENST00000539320 TYK2P29597 1187 aa20.64■□□□□ 0.89
SCARB1-206ENST00000539320 PIK3CBP42338 1070 aa20.64■□□□□ 0.89
SCARB1-206ENST00000539320 ALDH18A1P54886 795 aaKnown RBP20.64■□□□□ 0.89
SCARB1-206ENST00000539320 PHEXP78562 749 aa20.64■□□□□ 0.89
SCARB1-206ENST00000539320 ADORA2A-AS1P86434 159 aa20.64■□□□□ 0.89
SCARB1-206ENST00000539320 ID2Q02363 134 aa20.64■□□□□ 0.89
SCARB1-206ENST00000539320 UBAP2Q5T6F2 1119 aaKnown RBP20.64■□□□□ 0.89
SCARB1-206ENST00000539320 DEPDC1Q5TB30 811 aa20.64■□□□□ 0.89
SCARB1-206ENST00000539320 C16orf47Q6ZP98 133 aaPredicted RBP20.64■□□□□ 0.89
SCARB1-206ENST00000539320 MDGA2Q7Z553 956 aa20.64■□□□□ 0.89
SCARB1-206ENST00000539320 TICAM1Q8IUC6 712 aa20.64■□□□□ 0.89
SCARB1-206ENST00000539320 CHERPQ8IWX8 916 aaKnown RBP20.64■□□□□ 0.89
SCARB1-206ENST00000539320 RNF175Q8N4F7 328 aa20.64■□□□□ 0.89
SCARB1-206ENST00000539320 PTPMT1Q8WUK0 201 aaPredicted RBP20.64■□□□□ 0.89
SCARB1-206ENST00000539320 ASB15Q8WXK1 588 aa20.64■□□□□ 0.89
SCARB1-206ENST00000539320 SORBS1Q9BX66 1292 aaKnown RBP20.64■□□□□ 0.89
SCARB1-206ENST00000539320 OR8D2Q9GZM6 311 aa20.64■□□□□ 0.89
SCARB1-206ENST00000539320 HPF1Q9NWY4 346 aa20.64■□□□□ 0.89
SCARB1-206ENST00000539320 ERVK-11Q9UQG0 969 aa20.64■□□□□ 0.89
SCARB1-206ENST00000539320 CACNA1CQ13936 2221 aa20.63■□□□□ 0.89
SCARB1-206ENST00000539320 ABCA12Q86UK0 2595 aa20.63■□□□□ 0.89
SCARB1-206ENST00000539320 TMEM200CA6NKL6 621 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms