RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	MRM1	Q6IN84	353 aa	Known RBP	11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	WDR93	Q6P2C0	686 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	SH2D5	Q6ZV89	423 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	RPS19BP1	Q86WX3	136 aa	Known RBP	11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	SHISA5	Q8N114	240 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	FAM26E	Q8N5C1	309 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	CISD2	Q8N5K1	135 aa	Known RBP	11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	BCORP1	Q8N888	145 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	LRRN4CL	Q8ND94	238 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	MORN4	Q8NDC4	146 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ST6GALNAC3	Q8NDV1	305 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	OR1N1	Q8NGS0	311 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	TRPC4AP	Q8TEL6	797 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	TANK	Q92844	425 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	VMP1	Q96GC9	406 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	PELO	Q9BRX2	385 aa	Known RBP	11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ZNF717	Q9BY31	904 aa	Predicted RBP	11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	RBCK1	Q9BYM8	510 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	OR51B5	Q9H339	312 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ASF1B	Q9NVP2	202 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	NMRK1	Q9NWW6	199 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	AHSP	Q9NZD4	102 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	TMEM216	Q9P0N5	145 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	TRPS1	Q9UHF7	1281 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	SNX6	Q9UNH7	406 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	RNF11	Q9Y3C5	154 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828	CSAG2	Q9Y5P2	127 aa		11.51	□□□□□ -0.57
CLTCL1-205	ENST00000538828		A0A0A6YYD5	115 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828		A0A0G2JN53	185 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	SERTM1	A2A2V5	107 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	LRRC14B	A6NHZ5	514 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	TCP11X1	B4DZS4	312 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	FCHO1	O14526	889 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	GLRA3	O75311	464 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	CRYAB	P02511	175 aa	Known RBP	11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	NUDT17	P0C025	328 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	EDN3	P14138	238 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	BSG	P35613	385 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	HSD17B3	P37058	310 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	BUD31	P41223	144 aa	Predicted RBP	11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	CCT5	P48643	541 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	PRKAA2	P54646	552 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	MLF1	P58340	268 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	RPS13	P62277	151 aa	Known RBP	11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	IFT88	Q13099	833 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	SLAMF1	Q13291	335 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	UBAP2L	Q14157	1087 aa	Known RBP	11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	CCDC153	Q494R4	210 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	EMB	Q6PCB8	327 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	FAM180A	Q6UWF9	173 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	PAGE2	Q7Z2X7	111 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	MILR1	Q7Z6M3	343 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	GPR180	Q86V85	440 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	MYLK4	Q86YV6	388 aa	Predicted RBP	11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	CRLF3	Q8IUI8	442 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	MDS2	Q8NDY4	140 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	OR52B6	Q8NGF0	335 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	OR14A16	Q8NHC5	309 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	RDH11	Q8TC12	318 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	L3HYPDH	Q96EM0	354 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	CNDP1	Q96KN2	507 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ZNF382	Q96SR6	550 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	MTERF1	Q99551	399 aa	Known RBP	11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	MAPKAP1	Q9BPZ7	522 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	SLX1A	Q9BQ83	275 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	UTP23	Q9BRU9	249 aa	Known RBP	11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ANKZF1	Q9H8Y5	726 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	GRID1	Q9ULK0	1009 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	DOPEY1	Q5JWR5	2465 aa		11.5	□□□□□ -0.57
CLTCL1-205	ENST00000538828	RELN	P78509	3460 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828		A8MUI8	341 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	PROM1	O43490	865 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	DLX3	O60479	287 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	GUCY1B2	O75343	617 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ZFAND5	O76080	213 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	TUBB	P07437	444 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	PYGB	P11216	843 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	CPN2	P22792	545 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	CRHR1	P34998	444 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	HNRNPF	P52597	415 aa	Known RBP	11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	PKNOX1	P55347	436 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	TNFRSF17	Q02223	184 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	CLC	Q05315	142 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	STX4	Q12846	297 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	TUBA3C	Q13748	450 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ZNF678	Q5SXM1	525 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	TUBA3E	Q6PEY2	450 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	NUDT13	Q86X67	352 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	GPALPP1	Q8IXQ4	340 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	CYP4X1	Q8N118	509 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	FAM47B	Q8NA70	645 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	TMEM178A	Q8NBL3	297 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	TMEM52	Q8NDY8	209 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	CATSPER1	Q8NEC5	780 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	OR4F6	Q8NGB9	312 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	GRHL3	Q8TE85	626 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	UBLCP1	Q8WVY7	318 aa	Predicted RBP	11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	SCMH1	Q96GD3	660 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	ART5	Q96L15	291 aa		11.49	□□□□□ -0.57
CLTCL1-205	ENST00000538828	CSF3R	Q99062	836 aa		11.49	□□□□□ -0.57

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