RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 ZNF595Q8IYB9 648 aa13.96□□□□□ -0.17
RAB40B-202ENST00000538809 OR7G3Q8NG95 312 aa13.96□□□□□ -0.17
RAB40B-202ENST00000538809 UHMK1Q8TAS1 419 aaKnown RBP13.96□□□□□ -0.17
RAB40B-202ENST00000538809 UBE2E3Q969T4 207 aa13.96□□□□□ -0.17
RAB40B-202ENST00000538809 VMP1Q96GC9 406 aa13.96□□□□□ -0.17
RAB40B-202ENST00000538809 SORBS1Q9BX66 1292 aaKnown RBP13.96□□□□□ -0.17
RAB40B-202ENST00000538809 OR51B5Q9H339 312 aa13.96□□□□□ -0.17
RAB40B-202ENST00000538809 ADAP2Q9NPF8 381 aa13.96□□□□□ -0.17
RAB40B-202ENST00000538809 ANGPTL3Q9Y5C1 460 aa13.96□□□□□ -0.17
RAB40B-202ENST00000538809 NCKAP5O14513 1909 aa13.96□□□□□ -0.18
RAB40B-202ENST00000538809 CENPEQ02224 2701 aa13.95□□□□□ -0.18
RAB40B-202ENST00000538809 A0A1B0GUH1 482 aa13.95□□□□□ -0.18
RAB40B-202ENST00000538809 ASPDHA6ND91 283 aa13.95□□□□□ -0.18
RAB40B-202ENST00000538809 TRIM49D1C9J1S8 452 aa13.95□□□□□ -0.18
RAB40B-202ENST00000538809 POC1B-GALNT4F8VUJ3 575 aa13.95□□□□□ -0.18
RAB40B-202ENST00000538809 NME2P1O60361 137 aa13.95□□□□□ -0.18
RAB40B-202ENST00000538809 LDB3O75112 727 aa13.95□□□□□ -0.18
RAB40B-202ENST00000538809 KRT38O76015 456 aa13.95□□□□□ -0.18
RAB40B-202ENST00000538809 SIX3O95343 332 aaPredicted RBP13.95□□□□□ -0.18
RAB40B-202ENST00000538809 IFNA16P05015 189 aa13.95□□□□□ -0.18
RAB40B-202ENST00000538809 NME2P22392 152 aa13.95□□□□□ -0.18
RAB40B-202ENST00000538809 ATP5A1P25705 553 aaKnown RBP13.95□□□□□ -0.18
RAB40B-202ENST00000538809 CNTFP26441 200 aa13.95□□□□□ -0.18
RAB40B-202ENST00000538809 DCTP40126 519 aa13.95□□□□□ -0.18
RAB40B-202ENST00000538809 CYB561P49447 251 aa13.95□□□□□ -0.18
RAB40B-202ENST00000538809 ALDH6A1Q02252 535 aaKnown RBP13.95□□□□□ -0.18
RAB40B-202ENST00000538809 TERF2Q15554 542 aa13.95□□□□□ -0.18
RAB40B-202ENST00000538809 ZRSR2Q15696 482 aaKnown RBP13.95□□□□□ -0.18
RAB40B-202ENST00000538809 METTL2BQ6P1Q9 378 aaKnown RBP13.95□□□□□ -0.18
RAB40B-202ENST00000538809 KLC3Q6P597 504 aa13.95□□□□□ -0.18
RAB40B-202ENST00000538809 C16orf47Q6ZP98 133 aaPredicted RBP13.95□□□□□ -0.18
RAB40B-202ENST00000538809 IFT20Q8IY31 132 aa13.95□□□□□ -0.18
RAB40B-202ENST00000538809 CPSF7Q8N684 471 aaKnown RBP13.95□□□□□ -0.18
RAB40B-202ENST00000538809 HORMAD2Q8N7B1 307 aa13.95□□□□□ -0.18
RAB40B-202ENST00000538809 ACOT4Q8N9L9 421 aa13.95□□□□□ -0.18
RAB40B-202ENST00000538809 FAM98AQ8NCA5 519 aaKnown RBP13.95□□□□□ -0.18
RAB40B-202ENST00000538809 TRIM44Q96DX7 344 aaPredicted RBP13.95□□□□□ -0.18
RAB40B-202ENST00000538809 ROGDIQ9GZN7 287 aa13.95□□□□□ -0.18
RAB40B-202ENST00000538809 EPB41L4BQ9H329 900 aa13.95□□□□□ -0.18
RAB40B-202ENST00000538809 LIN28AQ9H9Z2 209 aaKnown RBP13.95□□□□□ -0.18
RAB40B-202ENST00000538809 LYRM4Q9HD34 91 aa13.95□□□□□ -0.18
RAB40B-202ENST00000538809 KCMF1Q9P0J7 381 aa13.95□□□□□ -0.18
RAB40B-202ENST00000538809 FREM3P0C091 2139 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 NPIPA5E9PKD4 350 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 ZNHIT1O43257 154 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 RIPK2O43353 540 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 UGDHO60701 494 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 RBP1P09455 135 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 SBK3P0C264 359 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 FAM153BP0C7A2 387 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 COL6A2P12110 1019 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 HIST1H1TP22492 207 aaPredicted RBP13.94□□□□□ -0.18
RAB40B-202ENST00000538809 SERPINB1P30740 379 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 HLCSP50747 726 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 RAP1GDS1P52306 607 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 GTF2H2Q13888 395 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 RCN2Q14257 317 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 ELAVL1Q15717 326 aaKnown RBP13.94□□□□□ -0.18
RAB40B-202ENST00000538809 AP5B1Q2VPB7 878 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 FAM153CQ494X1 144 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 TMEM35AQ53FP2 167 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 KHDRBS2Q5VWX1 349 aaKnown RBP13.94□□□□□ -0.18
RAB40B-202ENST00000538809 LIPJQ5W064 366 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 GTF2H2CQ6P1K8 395 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 ADGRD1Q6QNK2 874 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 TRMT10CQ7L0Y3 403 aaKnown RBP13.94□□□□□ -0.18
RAB40B-202ENST00000538809 TAOK1Q7L7X3 1001 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 GOLGA7Q7Z5G4 137 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 ARMC10Q8N2F6 343 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 TMEM151AQ8N4L1 468 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 ZNF321PQ8N8H1 164 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 L3MBTL4Q8NA19 623 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 SRFBP1Q8NEF9 429 aaKnown RBP13.94□□□□□ -0.18
RAB40B-202ENST00000538809 HUS1BQ8NHY5 278 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 RELTQ969Z4 430 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 CMTM7Q96FZ5 175 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 GPR137Q96N19 417 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 MTERF1Q99551 399 aaKnown RBP13.94□□□□□ -0.18
RAB40B-202ENST00000538809 CCDC77Q9BR77 488 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 TBCDQ9BTW9 1192 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 ALOXE3Q9BYJ1 711 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 ACTR8Q9H981 624 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 L2HGDHQ9H9P8 463 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 DMRT3Q9NQL9 472 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 XPR1Q9UBH6 696 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 NPIPA1Q9UND3 350 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 PPIEQ9UNP9 301 aaKnown RBP13.94□□□□□ -0.18
RAB40B-202ENST00000538809 IKBKGQ9Y6K9 419 aa13.94□□□□□ -0.18
RAB40B-202ENST00000538809 EXOC1LA0A1B0GW35 172 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 H0YIV9 168 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 STX16-NPEPL1H3BU86 382 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 CCL21O00585 134 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 PLPP1O14494 284 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 STX16O14662 325 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 CTNSO60931 367 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 PRKRAO75569 313 aaKnown RBP13.93□□□□□ -0.18
RAB40B-202ENST00000538809 ITGA10O75578 1167 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 RHOXF2BP0C7M4 288 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 ZNF24P17028 368 aa13.93□□□□□ -0.18
RAB40B-202ENST00000538809 CPN2P22792 545 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms