RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 TRABD2BA6NFA1 517 aa16.29■□□□□ 0.2
CLN6-202ENST00000538696 NVLO15381 856 aaKnown RBP16.29■□□□□ 0.2
CLN6-202ENST00000538696 BRINP1O60477 761 aa16.29■□□□□ 0.2
CLN6-202ENST00000538696 GALR3O60755 368 aaPredicted RBP16.29■□□□□ 0.2
CLN6-202ENST00000538696 EEDO75530 441 aaKnown RBP16.29■□□□□ 0.2
CLN6-202ENST00000538696 KLHL18O94889 574 aa16.29■□□□□ 0.2
CLN6-202ENST00000538696 LRATO95237 230 aa16.29■□□□□ 0.2
CLN6-202ENST00000538696 RAP1GDS1P52306 607 aa16.29■□□□□ 0.2
CLN6-202ENST00000538696 ELF3P78545 371 aaPredicted RBP16.29■□□□□ 0.2
CLN6-202ENST00000538696 DEFB134Q4QY38 66 aa16.29■□□□□ 0.2
CLN6-202ENST00000538696 COQ5Q5HYK3 327 aa16.29■□□□□ 0.2
CLN6-202ENST00000538696 PAGE3Q5JUK9 113 aa16.29■□□□□ 0.2
CLN6-202ENST00000538696 SPANXN4Q5MJ08 99 aa16.29■□□□□ 0.2
CLN6-202ENST00000538696 HACD2Q6Y1H2 254 aa16.29■□□□□ 0.2
CLN6-202ENST00000538696 ZNF793Q6ZN11 406 aa16.29■□□□□ 0.2
CLN6-202ENST00000538696 ULK2Q8IYT8 1036 aa16.29■□□□□ 0.2
CLN6-202ENST00000538696 FAM13CQ8NE31 585 aa16.29■□□□□ 0.2
CLN6-202ENST00000538696 OR9A4Q8NGU2 314 aa16.29■□□□□ 0.2
CLN6-202ENST00000538696 CDC26Q8NHZ8 85 aa16.29■□□□□ 0.2
CLN6-202ENST00000538696 RGMAQ96B86 450 aa16.29■□□□□ 0.2
CLN6-202ENST00000538696 LRFN5Q96NI6 719 aa16.29■□□□□ 0.2
CLN6-202ENST00000538696 CENPKQ9BS16 269 aa16.29■□□□□ 0.2
CLN6-202ENST00000538696 ANKHQ9HCJ1 492 aa16.29■□□□□ 0.2
CLN6-202ENST00000538696 PRDM7Q9NQW5 492 aa16.29■□□□□ 0.2
CLN6-202ENST00000538696 NDOR1Q9UHB4 597 aa16.29■□□□□ 0.2
CLN6-202ENST00000538696 NAALAD2Q9Y3Q0 740 aa16.29■□□□□ 0.2
CLN6-202ENST00000538696 TMEM184BQ9Y519 407 aaPredicted RBP16.29■□□□□ 0.2
CLN6-202ENST00000538696 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.29■□□□□ 0.2
CLN6-202ENST00000538696 SCN2AQ99250 2005 aa16.29■□□□□ 0.2
CLN6-202ENST00000538696 CCDC88CQ9P219 2028 aa16.29■□□□□ 0.2
CLN6-202ENST00000538696 A0A088AWK7 358 aa16.28■□□□□ 0.2
CLN6-202ENST00000538696 TEX51A0A1B0GUA7 166 aa16.28■□□□□ 0.2
CLN6-202ENST00000538696 ZNF860A6NHJ4 632 aa16.28■□□□□ 0.2
CLN6-202ENST00000538696 SGK494L7N484 410 aa16.28■□□□□ 0.2
CLN6-202ENST00000538696 CFLARO15519 480 aa16.28■□□□□ 0.2
CLN6-202ENST00000538696 AKAP10O43572 662 aa16.28■□□□□ 0.2
CLN6-202ENST00000538696 PDE5AO76074 875 aa16.28■□□□□ 0.2
CLN6-202ENST00000538696 SCELO95171 688 aa16.28■□□□□ 0.2
CLN6-202ENST00000538696 NSA2O95478 260 aaKnown RBP16.28■□□□□ 0.2
CLN6-202ENST00000538696 ANXA4P09525 319 aaPredicted RBP16.28■□□□□ 0.2
CLN6-202ENST00000538696 ALAS2P22557 587 aa16.28■□□□□ 0.2
CLN6-202ENST00000538696 CERS1P27544 350 aa16.28■□□□□ 0.2
CLN6-202ENST00000538696 BSGP35613 385 aa16.28■□□□□ 0.2
CLN6-202ENST00000538696 ARFIP1P53367 373 aa16.28■□□□□ 0.2
CLN6-202ENST00000538696 CLNS1AP54105 237 aaKnown RBP16.28■□□□□ 0.2
CLN6-202ENST00000538696 PSME3P61289 254 aa16.28■□□□□ 0.2
CLN6-202ENST00000538696 BTN3A2P78410 334 aa16.28■□□□□ 0.2
CLN6-202ENST00000538696 TGM3Q08188 693 aa16.28■□□□□ 0.2
CLN6-202ENST00000538696 FAM174BQ3ZCQ3 159 aa16.28■□□□□ 0.2
CLN6-202ENST00000538696 GALNT18Q6P9A2 607 aa16.28■□□□□ 0.2
CLN6-202ENST00000538696 SLC2A7Q6PXP3 512 aa16.28■□□□□ 0.2
CLN6-202ENST00000538696 RIMKLAQ8IXN7 391 aa16.28■□□□□ 0.2
CLN6-202ENST00000538696 FAM9CQ8IZT9 166 aa16.28■□□□□ 0.2
CLN6-202ENST00000538696 ARHGAP24Q8N264 748 aa16.28■□□□□ 0.2
CLN6-202ENST00000538696 AMER3Q8N944 861 aa16.28■□□□□ 0.2
CLN6-202ENST00000538696 PCYOX1LQ8NBM8 494 aa16.28■□□□□ 0.2
CLN6-202ENST00000538696 GLB1L3Q8NCI6 653 aaPredicted RBP16.28■□□□□ 0.2
CLN6-202ENST00000538696 GALNT6Q8NCL4 622 aa16.28■□□□□ 0.2
CLN6-202ENST00000538696 SRFBP1Q8NEF9 429 aaKnown RBP16.28■□□□□ 0.2
CLN6-202ENST00000538696 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.28■□□□□ 0.2
CLN6-202ENST00000538696 GFM2Q969S9 779 aaKnown RBP16.28■□□□□ 0.2
CLN6-202ENST00000538696 MVB12AQ96EY5 273 aa16.28■□□□□ 0.2
CLN6-202ENST00000538696 KCNC2Q96PR1 638 aa16.28■□□□□ 0.2
CLN6-202ENST00000538696 TBCDQ9BTW9 1192 aa16.28■□□□□ 0.2
CLN6-202ENST00000538696 MMADHCQ9H3L0 296 aaPredicted RBP16.28■□□□□ 0.2
CLN6-202ENST00000538696 NDE1Q9NXR1 346 aa16.28■□□□□ 0.2
CLN6-202ENST00000538696 LEF1Q9UJU2 399 aaPredicted RBP16.28■□□□□ 0.2
CLN6-202ENST00000538696 AK5Q9Y6K8 562 aa16.28■□□□□ 0.2
CLN6-202ENST00000538696 FXYD1O00168 92 aa16.27■□□□□ 0.2
CLN6-202ENST00000538696 DNAJB6O75190 326 aa16.27■□□□□ 0.2
CLN6-202ENST00000538696 RDH16O75452 317 aa16.27■□□□□ 0.2
CLN6-202ENST00000538696 GBAP04062 536 aa16.27■□□□□ 0.2
CLN6-202ENST00000538696 KLK1P06870 262 aa16.27■□□□□ 0.2
CLN6-202ENST00000538696 ATP5A1P25705 553 aaKnown RBP16.27■□□□□ 0.2
CLN6-202ENST00000538696 SSR2P43308 183 aa16.27■□□□□ 0.2
CLN6-202ENST00000538696 OR1D4P47884 311 aa16.27■□□□□ 0.2
CLN6-202ENST00000538696 AVPR1BP47901 424 aa16.27■□□□□ 0.2
CLN6-202ENST00000538696 OLR1P78380 273 aa16.27■□□□□ 0.2
CLN6-202ENST00000538696 GLIPR1L2Q4G1C9 344 aa16.27■□□□□ 0.2
CLN6-202ENST00000538696 OR4C11Q6IEV9 310 aa16.27■□□□□ 0.2
CLN6-202ENST00000538696 C8orf82Q6P1X6 216 aaPredicted RBP16.27■□□□□ 0.2
CLN6-202ENST00000538696 PRMT9Q6P2P2 845 aa16.27■□□□□ 0.2
CLN6-202ENST00000538696 BNC2Q6ZN30 1099 aaPredicted RBP16.27■□□□□ 0.2
CLN6-202ENST00000538696 COX15Q7KZN9 410 aa16.27■□□□□ 0.2
CLN6-202ENST00000538696 TIPARPQ7Z3E1 657 aaKnown RBP16.27■□□□□ 0.2
CLN6-202ENST00000538696 NUDT13Q86X67 352 aa16.27■□□□□ 0.2
CLN6-202ENST00000538696 SCUBE1Q8IWY4 988 aa16.27■□□□□ 0.2
CLN6-202ENST00000538696 SHISA5Q8N114 240 aa16.27■□□□□ 0.2
CLN6-202ENST00000538696 MMABQ96EY8 250 aaPredicted RBP16.27■□□□□ 0.2
CLN6-202ENST00000538696 SLC39A3Q9BRY0 314 aa16.27■□□□□ 0.2
CLN6-202ENST00000538696 COPS7BQ9H9Q2 264 aaPredicted RBP16.27■□□□□ 0.2
CLN6-202ENST00000538696 IL1RL2Q9HB29 575 aa16.27■□□□□ 0.2
CLN6-202ENST00000538696 SLC22A11Q9NSA0 550 aa16.27■□□□□ 0.2
CLN6-202ENST00000538696 MCM8Q9UJA3 840 aa16.27■□□□□ 0.2
CLN6-202ENST00000538696 CROTQ9UKG9 612 aa16.27■□□□□ 0.2
CLN6-202ENST00000538696 PACSIN3Q9UKS6 424 aa16.27■□□□□ 0.2
CLN6-202ENST00000538696 PRPF19Q9UMS4 504 aaKnown RBP16.27■□□□□ 0.2
CLN6-202ENST00000538696 MAU2Q9Y6X3 613 aa16.27■□□□□ 0.2
CLN6-202ENST00000538696 CACNA1AO00555 2505 aa16.27■□□□□ 0.19
CLN6-202ENST00000538696 A0A0A6YYD5 115 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms