RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 PPIGQ13427 754 aaKnown RBP eCLIP6.66□□□□□ -1.34
SORT1-209ENST00000538502 TARBP2Q15633 366 aaKnown RBP6.66□□□□□ -1.34
SORT1-209ENST00000538502 TBC1D25Q3MII6 688 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 PUS10Q3MIT2 529 aaKnown RBP6.66□□□□□ -1.34
SORT1-209ENST00000538502 SLC35F1Q5T1Q4 408 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 MPP7Q5T2T1 576 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 BRAT1Q6PJG6 821 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 AMZ2Q86W34 360 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 DCBLD1Q8N8Z6 715 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 HCAR2Q8TDS4 363 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 THEM6Q8WUY1 208 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 CNOT2Q9NZN8 540 aaKnown RBP6.66□□□□□ -1.34
SORT1-209ENST00000538502 CDC14AQ9UNH5 594 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 DHDHQ9UQ10 334 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 MRPS23Q9Y3D9 190 aaKnown RBP6.66□□□□□ -1.34
SORT1-209ENST00000538502 HES2Q9Y543 173 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 PCDHB14Q9Y5E9 798 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 IRS2Q9Y4H2 1338 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 SULT1B1O43704 296 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 NARSO43776 548 aaKnown RBP6.66□□□□□ -1.34
SORT1-209ENST00000538502 RDH16O75452 317 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 TFP02787 698 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 HRH2P25021 359 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 NIPAL4Q0D2K0 466 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 CCINQ13939 588 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 CCDC58Q4VC31 144 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 C6orf136Q5SQH8 315 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 ZNF529Q6P280 563 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 SUN3Q8TAQ9 357 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 LMLNQ96KR4 655 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 SRMSQ9H3Y6 488 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 Q9N2J8 555 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 SEPT4O43236 478 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 LATO43561 262 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 PPP1R11O60927 126 aaPredicted RBP6.66□□□□□ -1.34
SORT1-209ENST00000538502 JRKO75564 520 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 SIX3O95343 332 aaPredicted RBP6.66□□□□□ -1.34
SORT1-209ENST00000538502 KLK1P06870 262 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 ITGA5P08648 1049 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 UGT2B7P16662 529 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 AHCYP23526 432 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 ARL3P36405 182 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 GPR143P51810 404 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 MC2RQ01718 297 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 PON2Q15165 354 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 SLC36A3Q495N2 470 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 NOL9Q5SY16 702 aaKnown RBP6.66□□□□□ -1.34
SORT1-209ENST00000538502 SLC8B1Q6J4K2 584 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 C3orf33Q6P1S2 294 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 HFE2Q6ZVN8 426 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 ZNF440Q8IYI8 595 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 WDSUB1Q8N9V3 476 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 MAPK15Q8TD08 544 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 SLC5A11Q8WWX8 675 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 SNAPC3Q92966 411 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 NUS1Q96E22 293 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 FCRL3Q96P31 734 aaPredicted RBP6.66□□□□□ -1.34
SORT1-209ENST00000538502 NEMP2A6NFY4 417 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 TMEM150CB9EJG8 249 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 E7EQ34 232 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 GOSR2O14653 212 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 ZNF821O75541 412 aaPredicted RBP6.66□□□□□ -1.34
SORT1-209ENST00000538502 ZBTB7AO95365 584 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 MSR1P21757 451 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 TCEA1P23193 301 aaKnown RBP6.66□□□□□ -1.34
SORT1-209ENST00000538502 PKLRP30613 574 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 VIPR1P32241 457 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 LUMP51884 338 aaPredicted RBP6.66□□□□□ -1.34
SORT1-209ENST00000538502 HK3P52790 923 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 INHBEP58166 350 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 SERINC3Q13530 473 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 TOR1AIP1Q5JTV8 583 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 METTL2BQ6P1Q9 378 aaKnown RBP6.66□□□□□ -1.34
SORT1-209ENST00000538502 ZNF783Q6ZMS7 281 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 RNF130Q86XS8 419 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 C7orf61Q8IZ16 206 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 CASTOR1Q8WTX7 329 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 UPF1Q92900 1129 aaKnown RBP eCLIP6.66□□□□□ -1.341e-7■■■■□ 21.8
SORT1-209ENST00000538502 ELP4Q96EB1 424 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 FZD8Q9H461 694 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 ACTR10Q9NZ32 417 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 GALPQ9UBC7 116 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 AJAP1Q9UKB5 411 aaPredicted RBP6.66□□□□□ -1.34
SORT1-209ENST00000538502 LOC285095A0A1B0GVY8 99 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 J3KR12 359 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 NIPSNAP2O75323 286 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 RPP14O95059 124 aaKnown RBP6.66□□□□□ -1.34
SORT1-209ENST00000538502 LATS1O95835 1130 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 TSPAN15O95858 294 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 SPATA31D3P0C874 917 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 MAGEA6P43360 314 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 IRF5Q13568 498 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 CEACAM7Q14002 265 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 RAB11BQ15907 218 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 BCL2A1Q16548 175 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 UGT3A2Q3SY77 523 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 VARS2Q5ST30 1063 aaKnown RBP6.66□□□□□ -1.34
SORT1-209ENST00000538502 SPATA31D4Q6ZUB0 917 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 CCDC71LQ8N9Z2 235 aa6.66□□□□□ -1.34
SORT1-209ENST00000538502 SYT14Q8NB59 555 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms