RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 LAMP1P11279 417 aa9.66□□□□□ -0.86
GGA3-201ENST00000537686 ETFAP13804 333 aa9.66□□□□□ -0.86
GGA3-201ENST00000537686 PRDX3P30048 256 aaKnown RBP9.66□□□□□ -0.86
GGA3-201ENST00000537686 FOXA1P55317 472 aa9.66□□□□□ -0.86
GGA3-201ENST00000537686 ABATP80404 500 aa9.66□□□□□ -0.86
GGA3-201ENST00000537686 RPL6Q02878 288 aaKnown RBP9.66□□□□□ -0.86
GGA3-201ENST00000537686 GTDC1Q4AE62 458 aa9.66□□□□□ -0.86
GGA3-201ENST00000537686 WDR45BQ5MNZ6 344 aa9.66□□□□□ -0.86
GGA3-201ENST00000537686 XKR5Q6UX68 686 aa9.66□□□□□ -0.86
GGA3-201ENST00000537686 PROKR2Q8NFJ6 384 aa9.66□□□□□ -0.86
GGA3-201ENST00000537686 OR13J1Q8NGT2 312 aa9.66□□□□□ -0.86
GGA3-201ENST00000537686 FGF13Q92913 245 aa9.66□□□□□ -0.86
GGA3-201ENST00000537686 FOXJ1Q92949 421 aa9.66□□□□□ -0.86
GGA3-201ENST00000537686 SLC39A13Q96H72 371 aa9.66□□□□□ -0.86
GGA3-201ENST00000537686 FAM129BQ96TA1 746 aa9.66□□□□□ -0.86
GGA3-201ENST00000537686 SDR39U1Q9NRG7 319 aaPredicted RBP9.66□□□□□ -0.86
GGA3-201ENST00000537686 LYARQ9NX58 379 aaKnown RBP9.66□□□□□ -0.86
GGA3-201ENST00000537686 PTBP2Q9UKA9 531 aaKnown RBP9.66□□□□□ -0.86
GGA3-201ENST00000537686 COL11A1P12107 1806 aaPredicted RBP9.65□□□□□ -0.86
GGA3-201ENST00000537686 PSME4Q14997 1843 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 LOC285095A0A1B0GVY8 99 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 NME4O00746 187 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 IL1RNP18510 177 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 IGFBP6P24592 240 aaPredicted RBP9.65□□□□□ -0.86
GGA3-201ENST00000537686 RPS3AP61247 264 aaKnown RBP9.65□□□□□ -0.86
GGA3-201ENST00000537686 ZNF234Q14588 700 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 GINS1Q14691 196 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 COLEC12Q5KU26 742 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 FAM180BQ6P0A1 224 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 USP43Q70EL4 1123 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.65□□□□□ -0.86
GGA3-201ENST00000537686 TNFAIP8L1Q8WVP5 186 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 EZH1Q92800 747 aaPredicted RBP9.65□□□□□ -0.86
GGA3-201ENST00000537686 RHBDF1Q96CC6 855 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 HSPBAP1Q96EW2 488 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 KCTD7Q96MP8 289 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 SLC22A12Q96S37 553 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 TREX1Q9NSU2 369 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 GRXCR1A8MXD5 290 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 J3QRK9 145 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 CEBPBP17676 345 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 HRH2P25021 359 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 SLC9A3P48764 834 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 OR12D2P58182 307 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 SGCBQ16585 318 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 TSTQ16762 297 aaKnown RBP9.65□□□□□ -0.86
GGA3-201ENST00000537686 OLFML2AQ68BL7 652 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 CDH24Q86UP0 819 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 ERI1Q8IV48 349 aaKnown RBP9.65□□□□□ -0.86
GGA3-201ENST00000537686 OR4N5Q8IXE1 308 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 GATSQ8NAP1 163 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 OLIG1Q8TAK6 271 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 FBXL8Q96CD0 374 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 APIPQ96GX9 242 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 NECTIN4Q96NY8 510 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 DOHHQ9BU89 302 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 SEC61A2Q9H9S3 476 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 PRTFDC1Q9NRG1 225 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 KLRF1Q9NZS2 232 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 DOCK3Q8IZD9 2030 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 KIF13BQ9NQT8 1826 aa9.65□□□□□ -0.86
GGA3-201ENST00000537686 FAM172BPA6NC97 362 aa9.65□□□□□ -0.87
GGA3-201ENST00000537686 KLHL33A6NCF5 533 aa9.65□□□□□ -0.87
GGA3-201ENST00000537686 WASH3PC4AMC7 463 aa9.65□□□□□ -0.87
GGA3-201ENST00000537686 ZNF821O75541 412 aaPredicted RBP9.65□□□□□ -0.87
GGA3-201ENST00000537686 AHSA1O95433 338 aa9.65□□□□□ -0.87
GGA3-201ENST00000537686 HLA-FP30511 346 aa9.65□□□□□ -0.87
GGA3-201ENST00000537686 IST1P53990 364 aa9.65□□□□□ -0.87
GGA3-201ENST00000537686 GMFBP60983 142 aa9.65□□□□□ -0.87
GGA3-201ENST00000537686 SIM1P81133 766 aaPredicted RBP9.65□□□□□ -0.87
GGA3-201ENST00000537686 ATP6AP1Q15904 470 aa9.65□□□□□ -0.87
GGA3-201ENST00000537686 TAZQ16635 292 aa9.65□□□□□ -0.87
GGA3-201ENST00000537686 FLYWCH1Q4VC44 716 aa9.65□□□□□ -0.87
GGA3-201ENST00000537686 HTR3DQ70Z44 454 aa9.65□□□□□ -0.87
GGA3-201ENST00000537686 HSD11B1LQ7Z5J1 315 aa9.65□□□□□ -0.87
GGA3-201ENST00000537686 NUP43Q8NFH3 380 aa9.65□□□□□ -0.87
GGA3-201ENST00000537686 OR4K17Q8NGC6 315 aa9.65□□□□□ -0.87
GGA3-201ENST00000537686 GPR150Q8NGU9 434 aa9.65□□□□□ -0.87
GGA3-201ENST00000537686 EPYCQ99645 322 aa9.65□□□□□ -0.87
GGA3-201ENST00000537686 DHRS4Q9BTZ2 278 aa9.65□□□□□ -0.87
GGA3-201ENST00000537686 MGAT4BQ9UQ53 548 aa9.65□□□□□ -0.87
GGA3-201ENST00000537686 ZNF726A6NNF4 738 aa9.64□□□□□ -0.87
GGA3-201ENST00000537686 APOL3O95236 402 aa9.64□□□□□ -0.87
GGA3-201ENST00000537686 FGF4P08620 206 aa9.64□□□□□ -0.87
GGA3-201ENST00000537686 HOXD9P28356 352 aaPredicted RBP9.64□□□□□ -0.87
GGA3-201ENST00000537686 GABRA3P34903 492 aa9.64□□□□□ -0.87
GGA3-201ENST00000537686 TGFBR2P37173 567 aa9.64□□□□□ -0.87
GGA3-201ENST00000537686 RAB25P57735 213 aa9.64□□□□□ -0.87
GGA3-201ENST00000537686 POU6F2P78424 691 aaPredicted RBP9.64□□□□□ -0.87
GGA3-201ENST00000537686 ARF5P84085 180 aa9.64□□□□□ -0.87
GGA3-201ENST00000537686 PON2Q15165 354 aa9.64□□□□□ -0.87
GGA3-201ENST00000537686 ZFP69Q49AA0 526 aa9.64□□□□□ -0.87
GGA3-201ENST00000537686 TPRG1LQ5T0D9 272 aa9.64□□□□□ -0.87
GGA3-201ENST00000537686 CES4AQ5XG92 561 aa9.64□□□□□ -0.87
GGA3-201ENST00000537686 CSNK1A1LQ8N752 337 aa9.64□□□□□ -0.87
GGA3-201ENST00000537686 OR5AR1Q8NGP9 310 aa9.64□□□□□ -0.87
GGA3-201ENST00000537686 OR51A7Q8NH64 312 aa9.64□□□□□ -0.87
GGA3-201ENST00000537686 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.64□□□□□ -0.87
GGA3-201ENST00000537686 SHKBP1Q8TBC3 707 aa9.64□□□□□ -0.87
GGA3-201ENST00000537686 COQ8BQ96D53 544 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms