RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 ZER1Q7Z7L7 766 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 DENND1CQ8IV53 801 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 PDZD9Q8IXQ8 264 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 TMEM132CQ8N3T6 1108 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 BVESQ8NE79 360 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 GPR156Q8NFN8 814 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 OR52E4Q8NGH9 312 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 SKA2Q8WVK7 121 aaPredicted RBP10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 ZNF419Q96HQ0 510 aaPredicted RBP10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 NFKBIZQ9BYH8 718 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 XYLT2Q9H1B5 865 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 OR51J1Q9H342 316 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 UCK1Q9HA47 277 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 EVLQ9UI08 416 aaPredicted RBP10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 ASPDHA6ND91 283 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 AKAP8O43823 692 aaKnown RBP10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 HK1P19367 917 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 TSPAN5P62079 268 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 DENND6AQ8IWF6 608 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 CLDN22Q8N7P3 220 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 SFT2D1Q8WV19 159 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 ZBED6CLQ96FA7 236 aaPredicted RBP10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 IGSF21Q96ID5 467 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 GOLGA2P5Q9HBQ8 144 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 SPHK1Q9NYA1 384 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 CLCA2Q9UQC9 943 aa10.44□□□□□ -0.74
CLSTN3-207ENST00000537408 SMIM28A0A1B0GU29 152 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 MFSD11O43934 449 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 MPC2O95563 127 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 IL1AP01583 271 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 FABP3P05413 133 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 C8AP07357 584 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 PREPP48147 710 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 CSRP3P50461 194 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 SGCAQ16586 387 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 LGALSLQ3ZCW2 172 aaPredicted RBP10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 DGKKQ5KSL6 1271 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 C10orf120Q5SQS8 335 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 B3GNT9Q6UX72 402 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 NLRC3Q7RTR2 1065 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 ATPAF2Q8N5M1 289 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 ASZ1Q8WWH4 475 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 RAD51AP1Q96B01 352 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 ZNF583Q96ND8 569 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 SLC38A3Q99624 504 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 CDX2Q99626 313 aaPredicted RBP10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 OR51M1Q9H341 326 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 ESRP2Q9H6T0 727 aaKnown RBP10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 MINDY3Q9H8M7 445 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 ERVK-19Q9WJR5 959 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 RPH3AQ9Y2J0 694 aaPredicted RBP10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 RNF215Q9Y6U7 377 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 L7N2F9 121 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 CXCL10P02778 98 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 HRGP04196 525 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 CYP17A1P05093 508 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 PEPDP12955 493 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 PTBP1P26599 531 aaKnown RBP eCLIP10.43□□□□□ -0.743e-6■■■□□ 16.1
CLSTN3-207ENST00000537408 MRPL19P49406 292 aaKnown RBP10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 SH3BP2P78314 561 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 OLIG2Q13516 323 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 TARBP2Q15633 366 aaKnown RBP10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 RAB6CQ53S08 254 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 PTCRAQ6ISU1 281 aaPredicted RBP10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 TMEM17Q86X19 198 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 ADGRF3Q8IZF5 1079 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 SPAG16Q8N0X2 631 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 RNASE11Q8TAA1 199 aaKnown RBP10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 REG4Q9BYZ8 158 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 RAB6CQ9H0N0 254 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 SFXN1Q9H9B4 322 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 MYEF2Q9P2K5 600 aaKnown RBP10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 MALT1Q9UDY8 824 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 ZMYM5Q9UJ78 669 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 DOCK3Q8IZD9 2030 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 ARNTLO00327 626 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 PER2O15055 1255 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 CCNB2O95067 398 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 VIPP01282 170 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 SOD2P04179 222 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 CRYZQ08257 329 aaKnown RBP10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 AP5B1Q2VPB7 878 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 SLC6A19Q695T7 634 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 FAM180BQ6P0A1 224 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 IKBIPQ70UQ0 350 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 Q7L0L9 218 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 UNC93AQ86WB7 457 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 FAM131BQ86XD5 332 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 LRRC52Q8N7C0 313 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 ZNF548Q8NEK5 533 aaPredicted RBP10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 HRASLS5Q96KN8 279 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 PTDSS2Q9BVG9 487 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 PTPRHQ9HD43 1115 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 HCN2Q9UL51 889 aa10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 MRPL42Q9Y6G3 142 aaKnown RBP10.43□□□□□ -0.74
CLSTN3-207ENST00000537408 PRR23D1E9PI22 279 aaPredicted RBP10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 H3BM21 787 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 SULT1C2O00338 296 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 SOX30O94993 753 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms