RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 ZNF763Q0D2J5 394 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 FAM214AQ32MH5 1076 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 MYLK3Q32MK0 819 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 C6orf183Q5T699 404 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 TMEM110Q86TL2 294 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 PM20D2Q8IYS1 436 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 ZUFSPQ96AP4 578 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 OR5B12Q96R08 314 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 TREX2Q9BQ50 279 aaPredicted RBP10.26□□□□□ -0.77
CLIP1-209ENST00000537178 ACTR6Q9GZN1 396 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 RGCCQ9H4X1 137 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 HHATLQ9HCP6 504 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 XPNPEP1Q9NQW7 623 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 ZDHHC18Q9NUE0 388 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 RABL2AQ9UBK7 228 aaPredicted RBP10.26□□□□□ -0.77
CLIP1-209ENST00000537178 EPHA6Q9UF33 1036 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 RABL2BQ9UNT1 228 aa10.26□□□□□ -0.77
CLIP1-209ENST00000537178 A0A1W2PPW3 197 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 TMEM88BA6NKF7 163 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 RNF13O43567 381 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 DIRAS1O95057 198 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 AHSGP02765 367 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 FCER2P06734 321 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 GTF2F2P13984 249 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 CELP19835 753 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 GGT5P36269 586 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 BDKRB1P46663 353 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 SOX9P48436 509 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 HNRNPA0Q13151 305 aaKnown RBP10.25□□□□□ -0.77
CLIP1-209ENST00000537178 KCNC3Q14003 757 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 ZNF267Q14586 743 aaPredicted RBP10.25□□□□□ -0.77
CLIP1-209ENST00000537178 GINS1Q14691 196 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 MLC1Q15049 377 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 BTBD16Q32M84 506 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 CYP27C1Q4G0S4 372 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 EPGNQ6UW88 154 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 XKR5Q6UX68 686 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 BAIAP2L2Q6UXY1 529 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 SLC9B2Q86UD5 537 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 GALNT6Q8NCL4 622 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 HDAC2Q92769 488 aaKnown RBP10.25□□□□□ -0.77
CLIP1-209ENST00000537178 TCEAL4Q96EI5 215 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 PFDN5Q99471 154 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 GKN1Q9NS71 199 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 MS4A12Q9NXJ0 267 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 TRAV6A0A075B6T7 132 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 CSF2P04141 144 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 ERCC1P07992 297 aaPredicted RBP10.25□□□□□ -0.77
CLIP1-209ENST00000537178 SLURP2P0DP57 97 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 GDI1P31150 447 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 SOX2P48431 317 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 CAV3P56539 151 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 ZNF33AQ06730 810 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 SLC35F1Q5T1Q4 408 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 RPL13AP3Q6NVV1 102 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 TMEM126BQ8IUX1 230 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 OR51G2Q8NGK0 314 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 BBS10Q8TAM1 723 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 LRCH3Q96II8 777 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 C7orf34Q96L11 122 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 RANBP3Q9H6Z4 567 aaPredicted RBP10.25□□□□□ -0.77
CLIP1-209ENST00000537178 FBXL12Q9NXK8 326 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 COL20A1Q9P218 1284 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 RGPD3A6NKT7 1758 aaPredicted RBP10.25□□□□□ -0.77
CLIP1-209ENST00000537178 RGPD4Q7Z3J3 1758 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 TTLL8A6PVC2 850 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 TP53I11O14683 189 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 RFPL1O75677 317 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 C6orf47O95873 294 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 TBX18O95935 607 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 PFKLP17858 780 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 OXTRP30559 389 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 FRKP42685 505 aaPredicted RBP10.25□□□□□ -0.77
CLIP1-209ENST00000537178 ARSFP54793 590 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 RPS13P62277 151 aaKnown RBP10.25□□□□□ -0.77
CLIP1-209ENST00000537178 COL28A1Q2UY09 1125 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 GARNL3Q5VVW2 1013 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 TMEM225Q6GV28 225 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 SLC27A4Q6P1M0 643 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 MTFR2Q6P444 385 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 Q6ZVU0 165 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 ZNF367Q7RTV3 350 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 TMPRSS9Q7Z410 1059 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 GKN2Q86XP6 184 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 ALDH16A1Q8IZ83 802 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 ZNF611Q8N823 705 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 OR4E2Q8NGC2 313 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 OR9A1PQ8NGU1 263 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 SHDQ96IW2 340 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 TSGA13Q96PP4 275 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 SRRDQ9UH36 339 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 UBQLN2Q9UHD9 624 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 PCDHGA2Q9Y5H1 932 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 TIMM8BQ9Y5J9 83 aaPredicted RBP10.25□□□□□ -0.77
CLIP1-209ENST00000537178 IGLV3-22A0A075B6J6 115 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 TMEM233B4DJY2 109 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 KCNJ13O60928 360 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 SYNGR4O95473 234 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 SLC9A3P48764 834 aa10.25□□□□□ -0.77
CLIP1-209ENST00000537178 ZNF84P51523 738 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms