RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 MYLK4Q86YV6 388 aaPredicted RBP16.07■□□□□ 0.16
SFSWAP-205ENST00000537164 GSPT2Q8IYD1 628 aaKnown RBP16.07■□□□□ 0.16
SFSWAP-205ENST00000537164 CYP4X1Q8N118 509 aa16.07■□□□□ 0.16
SFSWAP-205ENST00000537164 KIF2BQ8N4N8 673 aa16.07■□□□□ 0.16
SFSWAP-205ENST00000537164 MDS2Q8NDY4 140 aa16.07■□□□□ 0.16
SFSWAP-205ENST00000537164 ZNF483Q8TF39 744 aaPredicted RBP16.07■□□□□ 0.16
SFSWAP-205ENST00000537164 NSUN5Q96P11 429 aaKnown RBP16.07■□□□□ 0.16
SFSWAP-205ENST00000537164 TAAR6Q96RI8 345 aa16.07■□□□□ 0.16
SFSWAP-205ENST00000537164 CCDC77Q9BR77 488 aa16.07■□□□□ 0.16
SFSWAP-205ENST00000537164 CENPKQ9BS16 269 aa16.07■□□□□ 0.16
SFSWAP-205ENST00000537164 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.07■□□□□ 0.16
SFSWAP-205ENST00000537164 TRIM45Q9H8W5 580 aaPredicted RBP16.07■□□□□ 0.16
SFSWAP-205ENST00000537164 PPCSQ9HAB8 311 aa16.07■□□□□ 0.16
SFSWAP-205ENST00000537164 TMEM216Q9P0N5 145 aa16.07■□□□□ 0.16
SFSWAP-205ENST00000537164 ABI3Q9P2A4 366 aa16.07■□□□□ 0.16
SFSWAP-205ENST00000537164 SPACA6W5XKT8 324 aa16.07■□□□□ 0.16
SFSWAP-205ENST00000537164 DOPEY1Q5JWR5 2465 aa16.07■□□□□ 0.16
SFSWAP-205ENST00000537164 ZGRF1Q86YA3 2104 aa16.06■□□□□ 0.16
SFSWAP-205ENST00000537164 MAN1A2O60476 641 aa16.06■□□□□ 0.16
SFSWAP-205ENST00000537164 MYO1DO94832 1006 aa16.06■□□□□ 0.16
SFSWAP-205ENST00000537164 F10P00742 488 aa16.06■□□□□ 0.16
SFSWAP-205ENST00000537164 GSTA1P08263 222 aa16.06■□□□□ 0.16
SFSWAP-205ENST00000537164 EDN3P14138 238 aa16.06■□□□□ 0.16
SFSWAP-205ENST00000537164 CD96P40200 585 aa16.06■□□□□ 0.16
SFSWAP-205ENST00000537164 IGLV3-21P80748 117 aaPredicted RBP16.06■□□□□ 0.16
SFSWAP-205ENST00000537164 DDX39BQ13838 428 aaKnown RBP16.06■□□□□ 0.16
SFSWAP-205ENST00000537164 RASA2Q15283 850 aa16.06■□□□□ 0.16
SFSWAP-205ENST00000537164 TEX35Q5T0J7 233 aa16.06■□□□□ 0.16
SFSWAP-205ENST00000537164 MRM1Q6IN84 353 aaKnown RBP16.06■□□□□ 0.16
SFSWAP-205ENST00000537164 FAM180AQ6UWF9 173 aa16.06■□□□□ 0.16
SFSWAP-205ENST00000537164 TDRPQ86YL5 185 aa16.06■□□□□ 0.16
SFSWAP-205ENST00000537164 BCORP1Q8N888 145 aa16.06■□□□□ 0.16
SFSWAP-205ENST00000537164 MYRIPQ8NFW9 859 aa16.06■□□□□ 0.16
SFSWAP-205ENST00000537164 SUN3Q8TAQ9 357 aa16.06■□□□□ 0.16
SFSWAP-205ENST00000537164 ATP6V1E2Q96A05 226 aa16.06■□□□□ 0.16
SFSWAP-205ENST00000537164 MAGEB10Q96LZ2 347 aaPredicted RBP16.06■□□□□ 0.16
SFSWAP-205ENST00000537164 CDK15Q96Q40 435 aa16.06■□□□□ 0.16
SFSWAP-205ENST00000537164 UTP23Q9BRU9 249 aaKnown RBP16.06■□□□□ 0.16
SFSWAP-205ENST00000537164 CDCP1Q9H5V8 836 aa16.06■□□□□ 0.16
SFSWAP-205ENST00000537164 DDX31Q9H8H2 851 aaKnown RBP16.06■□□□□ 0.16
SFSWAP-205ENST00000537164 SPTBN1Q01082 2364 aaKnown RBP16.06■□□□□ 0.16
SFSWAP-205ENST00000537164 ANKUB1A6NFN9 424 aa16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 GABRR3A8MPY1 467 aa16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 A8MUA0 341 aa16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 SAP18O00422 153 aaKnown RBP16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 SH3BGRLO75368 114 aa16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 SEMA3DO95025 777 aa16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 ETHE1O95571 254 aa16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 PPP2R1BP30154 601 aa16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 TRHRP34981 398 aaPredicted RBP16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 BSGP35613 385 aa16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 CLCN2P51788 898 aa16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 RAP1GDS1P52306 607 aa16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 MLF1P58340 268 aa16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 HERVK_113P63132 956 aa16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 SLAMF1Q13291 335 aa16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 BIKQ13323 160 aa16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 SERTAD2Q14140 314 aa16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 EIF2S3LQ2VIR3 472 aaKnown RBP16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 FHL5Q5TD97 284 aa16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 FRG2Q64ET8 278 aa16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 SH2D5Q6ZV89 423 aa16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 TMEM132CQ8N3T6 1108 aa16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 DNAJB8Q8NHS0 232 aa16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 PTPMT1Q8WUK0 201 aaPredicted RBP16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 ANKRD9Q96BM1 317 aaPredicted RBP16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 VMP1Q96GC9 406 aa16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 SCMH1Q96GD3 660 aa16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 SIGLEC12Q96PQ1 595 aa16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 FRG2BQ96QU4 278 aa16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 SORBS1Q9BX66 1292 aaKnown RBP16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 ERVK-6Q9BXR3 956 aa16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 ALOXE3Q9BYJ1 711 aa16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 ANKZF1Q9H8Y5 726 aa16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 PNO1Q9NRX1 252 aaKnown RBP16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 PHF11Q9UIL8 331 aa16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 ZNF223Q9UK11 482 aaPredicted RBP16.05■□□□□ 0.16
SFSWAP-205ENST00000537164 A0A0A6YYD5 115 aa16.04■□□□□ 0.16
SFSWAP-205ENST00000537164 A0A1B0GTL3 188 aa16.04■□□□□ 0.16
SFSWAP-205ENST00000537164 PROM1O43490 865 aa16.04■□□□□ 0.16
SFSWAP-205ENST00000537164 NEURL1O76050 574 aa16.04■□□□□ 0.16
SFSWAP-205ENST00000537164 OTCP00480 354 aa16.04■□□□□ 0.16
SFSWAP-205ENST00000537164 TAC1P20366 129 aa16.04■□□□□ 0.16
SFSWAP-205ENST00000537164 CPN2P22792 545 aa16.04■□□□□ 0.16
SFSWAP-205ENST00000537164 TPP2P29144 1249 aaPredicted RBP16.04■□□□□ 0.16
SFSWAP-205ENST00000537164 TDGF1P3P51864 188 aa16.04■□□□□ 0.16
SFSWAP-205ENST00000537164 NEK2P51955 445 aa16.04■□□□□ 0.16
SFSWAP-205ENST00000537164 ZNF766Q5HY98 468 aa16.04■□□□□ 0.16
SFSWAP-205ENST00000537164 MILR1Q7Z6M3 343 aa16.04■□□□□ 0.16
SFSWAP-205ENST00000537164 CLNKQ7Z7G1 428 aa16.04■□□□□ 0.16
SFSWAP-205ENST00000537164 GPR180Q86V85 440 aa16.04■□□□□ 0.16
SFSWAP-205ENST00000537164 MORN4Q8NDC4 146 aa16.04■□□□□ 0.16
SFSWAP-205ENST00000537164 OR4F6Q8NGB9 312 aa16.04■□□□□ 0.16
SFSWAP-205ENST00000537164 NR4A3Q92570 626 aa16.04■□□□□ 0.16
SFSWAP-205ENST00000537164 TANKQ92844 425 aa16.04■□□□□ 0.16
SFSWAP-205ENST00000537164 DAZLQ92904 295 aaKnown RBP16.04■□□□□ 0.16
SFSWAP-205ENST00000537164 SERPINI1Q99574 410 aa16.04■□□□□ 0.16
SFSWAP-205ENST00000537164 DEFB126Q9BYW3 111 aa16.04■□□□□ 0.16
SFSWAP-205ENST00000537164 SEMA4BQ9NPR2 832 aaPredicted RBP16.04■□□□□ 0.16
SFSWAP-205ENST00000537164 OLAHQ9NV23 265 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms