RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 GLI4P10075 376 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 GABRA1P14867 456 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 CERS1P27544 350 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 HNRNPH1P31943 449 aaKnown RBP12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 DNASE1L1P49184 302 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 HNRNPFP52597 415 aaKnown RBP12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 HK2P52789 917 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 PGGT1BP53609 377 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 SLC12A2P55011 1212 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 CDKL1Q00532 357 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 SERTAD2Q14140 314 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 SLC10A1Q14973 349 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 XKR6Q5GH73 641 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 TEDDM1Q5T9Z0 273 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 ARSKQ6UWY0 536 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 TRILQ7L0X0 811 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 CTAGE6Q86UF2 777 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 LIX1Q8N485 282 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 TMEM251Q8N6I4 163 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 C7orf57Q8NEG2 295 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 KIAA1191Q96A73 305 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 SCYL1Q96KG9 808 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 ALOXE3Q9BYJ1 711 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 ROGDIQ9GZN7 287 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 PITHD1Q9GZP4 211 aaPredicted RBP12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 CLEC4MQ9H2X3 399 aaPredicted RBP12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 CNOT10Q9H9A5 744 aaKnown RBP12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 CCM2LQ9NUG4 571 aaPredicted RBP12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 WWOXQ9NZC7 414 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 CHMP2BQ9UQN3 213 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 SPG11Q96JI7 2443 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 NF1P21359 2839 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 ZNF407Q9C0G0 2248 aa12.02□□□□□ -0.49
TNFRSF1A-207ENST00000535958 ITPR3Q14573 2671 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 TRGV5A0A0B4J1U4 118 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 A0A0G2JNJ9 132 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 FAM95CA0A1B0GW59 222 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 NCF1BA6NI72 391 aaPredicted RBP12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 NCF1CA8MVU1 366 aaPredicted RBP12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 TGFBR3LH3BV60 316 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 SUSD5O60279 629 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 CTNSO60931 367 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 IGHG3P01860 377 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 NCF1P14598 390 aaPredicted RBP12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 UQCRC1P31930 480 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 KIR2DL3P43628 341 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 KCNC1P48547 511 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 DGKQP52824 942 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 LIM2P55344 173 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 KCNJ2P63252 427 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 RNF4P78317 190 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 CEBPEQ15744 281 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 TGIF2LYQ8IUE0 185 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 TCAIMQ8N3R3 496 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 SNX31Q8N9S9 440 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 TMEM52Q8NDY8 209 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 OR8K3Q8NH51 312 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 SLC22A8Q8TCC7 542 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 SLC2A12Q8TD20 617 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 ANKRD7Q92527 254 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 PWWP2AQ96N64 755 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 KCNC2Q96PR1 638 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 CSF3RQ99062 836 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 GPATCH1Q9BRR8 931 aaKnown RBP12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 TMUB1Q9BVT8 246 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 AICDAQ9GZX7 198 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 GPRC5BQ9NZH0 403 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 Q9UFV3 132 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 ST6GALNAC2Q9UJ37 374 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 IKZF3Q9UKT9 509 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 BOKQ9UMX3 212 aaPredicted RBP12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 DAPP1Q9UN19 280 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 L3MBTL1Q9Y468 752 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 DNAJC13O75165 2243 aa12.01□□□□□ -0.49
TNFRSF1A-207ENST00000535958 MYOCOSA0A1B0GUC4 107 aa12□□□□□ -0.49
TNFRSF1A-207ENST00000535958 HCN1O60741 890 aa12□□□□□ -0.49
TNFRSF1A-207ENST00000535958 GLSO94925 669 aaPredicted RBP12□□□□□ -0.49
TNFRSF1A-207ENST00000535958 DRD2P14416 443 aa12□□□□□ -0.49
TNFRSF1A-207ENST00000535958 KLK2P20151 261 aa12□□□□□ -0.49
TNFRSF1A-207ENST00000535958 ELK3P41970 407 aa12□□□□□ -0.49
TNFRSF1A-207ENST00000535958 GDF5P43026 501 aa12□□□□□ -0.49
TNFRSF1A-207ENST00000535958 NR0B1P51843 470 aaKnown RBP12□□□□□ -0.49
TNFRSF1A-207ENST00000535958 TBL3Q12788 808 aaKnown RBP12□□□□□ -0.49
TNFRSF1A-207ENST00000535958 ZNF460Q14592 562 aa12□□□□□ -0.49
TNFRSF1A-207ENST00000535958 TSNQ15631 228 aaKnown RBP12□□□□□ -0.49
TNFRSF1A-207ENST00000535958 HIST2H2ACQ16777 129 aaPredicted RBP12□□□□□ -0.49
TNFRSF1A-207ENST00000535958 PAGE2BQ5JRK9 111 aa12□□□□□ -0.49
TNFRSF1A-207ENST00000535958 HP1BP3Q5SSJ5 553 aaPredicted RBP12□□□□□ -0.49
TNFRSF1A-207ENST00000535958 RIPPLY2Q5TAB7 128 aa12□□□□□ -0.49
TNFRSF1A-207ENST00000535958 HIST2H2AA3Q6FI13 130 aa12□□□□□ -0.49
TNFRSF1A-207ENST00000535958 SLCO4C1Q6ZQN7 724 aa12□□□□□ -0.49
TNFRSF1A-207ENST00000535958 GAS2L3Q86XJ1 694 aa12□□□□□ -0.49
TNFRSF1A-207ENST00000535958 FBXW8Q8N3Y1 598 aa12□□□□□ -0.49
TNFRSF1A-207ENST00000535958 SRFBP1Q8NEF9 429 aaKnown RBP12□□□□□ -0.49
TNFRSF1A-207ENST00000535958 ART5Q96L15 291 aa12□□□□□ -0.49
TNFRSF1A-207ENST00000535958 DGAT2Q96PD7 388 aa12□□□□□ -0.49
TNFRSF1A-207ENST00000535958 NT5DC2Q9H857 520 aa12□□□□□ -0.49
TNFRSF1A-207ENST00000535958 DNAJC11Q9NVH1 559 aa12□□□□□ -0.49
TNFRSF1A-207ENST00000535958 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12□□□□□ -0.49
TNFRSF1A-207ENST00000535958 NSMCE4AQ9NXX6 385 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms