RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 CCL27Q9Y4X3 112 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 PCDHGA7Q9Y5G6 932 aa11.7□□□□□ -0.54
SCARB1-204ENST00000535005 COPG1Q9Y678 874 aaKnown RBP11.7□□□□□ -0.54
SCARB1-204ENST00000535005 CNOT1A5YKK6 2376 aaKnown RBP11.69□□□□□ -0.54
SCARB1-204ENST00000535005 LOC105369274A0A096LPK9 316 aa11.69□□□□□ -0.54
SCARB1-204ENST00000535005 LOC102723532A0A0G2JNH3 316 aa11.69□□□□□ -0.54
SCARB1-204ENST00000535005 AQP12BA6NM10 295 aa11.69□□□□□ -0.54
SCARB1-204ENST00000535005 MAGEB17A8MXT2 336 aa11.69□□□□□ -0.54
SCARB1-204ENST00000535005 PIP5K1BO14986 540 aa11.69□□□□□ -0.54
SCARB1-204ENST00000535005 HCRTR1O43613 425 aa11.69□□□□□ -0.54
SCARB1-204ENST00000535005 MT-CO3P00414 261 aa11.69□□□□□ -0.54
SCARB1-204ENST00000535005 JUNP05412 331 aaKnown RBP11.69□□□□□ -0.54
SCARB1-204ENST00000535005 INHBBP09529 407 aa11.69□□□□□ -0.54
SCARB1-204ENST00000535005 FCGR1AP12314 374 aa11.69□□□□□ -0.54
SCARB1-204ENST00000535005 PRPH2P23942 346 aa11.69□□□□□ -0.54
SCARB1-204ENST00000535005 PTX3P26022 381 aaPredicted RBP11.69□□□□□ -0.54
SCARB1-204ENST00000535005 SIM1P81133 766 aaPredicted RBP11.69□□□□□ -0.54
SCARB1-204ENST00000535005 ACY1Q03154 408 aa11.69□□□□□ -0.54
SCARB1-204ENST00000535005 CYP4F3Q08477 520 aa11.69□□□□□ -0.54
SCARB1-204ENST00000535005 ISXQ2M1V0 245 aa11.69□□□□□ -0.54
SCARB1-204ENST00000535005 ADPRMQ3LIE5 342 aa11.69□□□□□ -0.54
SCARB1-204ENST00000535005 CCDC157Q569K6 752 aa11.69□□□□□ -0.54
SCARB1-204ENST00000535005 SGO1Q5FBB7 561 aa11.69□□□□□ -0.54
SCARB1-204ENST00000535005 TCTE1Q5JU00 501 aa11.69□□□□□ -0.54
SCARB1-204ENST00000535005 PHF19Q5T6S3 580 aa11.69□□□□□ -0.54
SCARB1-204ENST00000535005 DHRS13Q6UX07 377 aa11.69□□□□□ -0.54
SCARB1-204ENST00000535005 ZBTB49Q6ZSB9 765 aa11.69□□□□□ -0.54
SCARB1-204ENST00000535005 Q6ZSR9 355 aa11.69□□□□□ -0.54
SCARB1-204ENST00000535005 AQP12AQ8IXF9 295 aa11.69□□□□□ -0.54
SCARB1-204ENST00000535005 OR4N4Q8N0Y3 316 aa11.69□□□□□ -0.54
SCARB1-204ENST00000535005 AGBL5Q8NDL9 886 aa11.69□□□□□ -0.54
SCARB1-204ENST00000535005 SLC13A3Q8WWT9 602 aa11.69□□□□□ -0.54
SCARB1-204ENST00000535005 RERGQ96A58 199 aaPredicted RBP11.69□□□□□ -0.54
SCARB1-204ENST00000535005 ROPN1LQ96C74 230 aa11.69□□□□□ -0.54
SCARB1-204ENST00000535005 MTFMTQ96DP5 389 aaKnown RBP11.69□□□□□ -0.54
SCARB1-204ENST00000535005 C19orf60Q96EN9 201 aa11.69□□□□□ -0.54
SCARB1-204ENST00000535005 CMTM7Q96FZ5 175 aa11.69□□□□□ -0.54
SCARB1-204ENST00000535005 MTERF1Q99551 399 aaKnown RBP11.69□□□□□ -0.54
SCARB1-204ENST00000535005 SLC25A23Q9BV35 468 aa11.69□□□□□ -0.54
SCARB1-204ENST00000535005 SLC6A16Q9GZN6 736 aa11.69□□□□□ -0.54
SCARB1-204ENST00000535005 MUC13Q9H3R2 512 aa11.69□□□□□ -0.54
SCARB1-204ENST00000535005 MEAF6Q9HAF1 191 aa11.69□□□□□ -0.54
SCARB1-204ENST00000535005 ADA2Q9NZK5 511 aa11.69□□□□□ -0.54
SCARB1-204ENST00000535005 BBIP1A8MTZ0 92 aa11.68□□□□□ -0.54
SCARB1-204ENST00000535005 H3BMH7 237 aa11.68□□□□□ -0.54
SCARB1-204ENST00000535005 PSMD12O00232 456 aaPredicted RBP11.68□□□□□ -0.54
SCARB1-204ENST00000535005 RGS14O43566 566 aa11.68□□□□□ -0.54
SCARB1-204ENST00000535005 AKAP10O43572 662 aa11.68□□□□□ -0.54
SCARB1-204ENST00000535005 OCM2P0CE71 109 aa11.68□□□□□ -0.54
SCARB1-204ENST00000535005 OCMP0CE72 109 aaPredicted RBP11.68□□□□□ -0.54
SCARB1-204ENST00000535005 FOLR1P15328 257 aa11.68□□□□□ -0.54
SCARB1-204ENST00000535005 CSTF2P33240 577 aaKnown RBP eCLIP11.68□□□□□ -0.54
SCARB1-204ENST00000535005 NOVA1P51513 510 aaKnown RBP11.68□□□□□ -0.54
SCARB1-204ENST00000535005 BCAP31P51572 246 aa11.68□□□□□ -0.54
SCARB1-204ENST00000535005 ARFIP1P53367 373 aa11.68□□□□□ -0.54
SCARB1-204ENST00000535005 RPS13P62277 151 aaKnown RBP11.68□□□□□ -0.54
SCARB1-204ENST00000535005 HYAL2Q12891 473 aa11.68□□□□□ -0.54
SCARB1-204ENST00000535005 DDX39BQ13838 428 aaKnown RBP11.68□□□□□ -0.54
SCARB1-204ENST00000535005 PRTGQ2VWP7 1150 aa11.68□□□□□ -0.54
SCARB1-204ENST00000535005 TMEM35AQ53FP2 167 aa11.68□□□□□ -0.54
SCARB1-204ENST00000535005 DEPDC1Q5TB30 811 aa11.68□□□□□ -0.54
SCARB1-204ENST00000535005 TTC33Q6PID6 262 aaPredicted RBP11.68□□□□□ -0.54
SCARB1-204ENST00000535005 SCIMPQ6UWF3 145 aa11.68□□□□□ -0.54
SCARB1-204ENST00000535005 DCDC5Q6ZRR9 648 aa11.68□□□□□ -0.54
SCARB1-204ENST00000535005 LINC00299Q6ZSB3 139 aa11.68□□□□□ -0.54
SCARB1-204ENST00000535005 BPHLQ86WA6 291 aaPredicted RBP11.68□□□□□ -0.54
SCARB1-204ENST00000535005 MINDY2Q8NBR6 621 aa11.68□□□□□ -0.54
SCARB1-204ENST00000535005 TRUB1Q8WWH5 349 aaKnown RBP11.68□□□□□ -0.54
SCARB1-204ENST00000535005 TMIGD2Q96BF3 282 aa11.68□□□□□ -0.54
SCARB1-204ENST00000535005 METTL2AQ96IZ6 378 aaKnown RBP11.68□□□□□ -0.54
SCARB1-204ENST00000535005 PLEKHA8Q96JA3 519 aa11.68□□□□□ -0.54
SCARB1-204ENST00000535005 SLC45A3Q96JT2 553 aa11.68□□□□□ -0.54
SCARB1-204ENST00000535005 C9orf16Q9BUW7 83 aa11.68□□□□□ -0.54
SCARB1-204ENST00000535005 C1orf50Q9BV19 199 aa11.68□□□□□ -0.54
SCARB1-204ENST00000535005 STRADBQ9C0K7 418 aa11.68□□□□□ -0.54
SCARB1-204ENST00000535005 WDR55Q9H6Y2 383 aaPredicted RBP11.68□□□□□ -0.54
SCARB1-204ENST00000535005 CD300AQ9UGN4 299 aa11.68□□□□□ -0.54
SCARB1-204ENST00000535005 DMXL1Q9Y485 3027 aa11.68□□□□□ -0.54
SCARB1-204ENST00000535005 MYOCOSA0A1B0GUC4 107 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 FUOMA2VDF0 154 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 FITM1A5D6W6 292 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 LRIT2A6NDA9 550 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 SDHDO14521 159 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 MAGEB3O15480 346 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 VPS4BO75351 444 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 RSL1D1O76021 490 aaKnown RBP11.67□□□□□ -0.54
SCARB1-204ENST00000535005 SEMA3DO95025 777 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 KCNK5O95279 499 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 SLC35G6P0C7Q6 338 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 LINC00032P0C843 101 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 VSX2P58304 361 aaPredicted RBP11.67□□□□□ -0.54
SCARB1-204ENST00000535005 CYP4F2P78329 520 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 RGS1Q08116 209 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 TUBA3CQ13748 450 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 KCNAB1Q14722 419 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 NRF1Q16656 503 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 RSPO4Q2I0M5 234 aaPredicted RBP11.67□□□□□ -0.54
SCARB1-204ENST00000535005 KHDRBS2Q5VWX1 349 aaKnown RBP11.67□□□□□ -0.54
SCARB1-204ENST00000535005 C8orf82Q6P1X6 216 aaPredicted RBP11.67□□□□□ -0.54
SCARB1-204ENST00000535005 DDIASQ8IXT1 998 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms