RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 DLGAP1O14490 977 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 SIGLEC5O15389 551 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 YKT6O15498 198 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 ATG13O75143 517 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 TULP3O75386 442 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 APOL3O95236 402 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 PRAMEF1O95521 474 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 SERPINA1P01009 418 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 LINC00032P0C843 101 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 HGFP14210 728 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 RAB3BP20337 219 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 IGFBP5P24593 272 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 TIE1P35590 1138 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 CSTF1Q05048 431 aaKnown RBP8.66□□□□□ -1.02
SF3B2-216ENST00000534765 SIGLEC14Q08ET2 396 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 C2orf27AQ580R0 203 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 PARM1Q6UWI2 310 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 KIAA1324Q6UXG2 1013 aaKnown RBP8.66□□□□□ -1.02
SF3B2-216ENST00000534765 CRELD1Q96HD1 420 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 GAS2L1Q99501 681 aaPredicted RBP8.66□□□□□ -1.02
SF3B2-216ENST00000534765 RBCK1Q9BYM8 510 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 SLIRPQ9GZT3 109 aaKnown RBP8.66□□□□□ -1.02
SF3B2-216ENST00000534765 RNF121Q9H920 327 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 HCN3Q9P1Z3 774 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 PFDN2Q9UHV9 154 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 CLCA2Q9UQC9 943 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 ZFC3H1O60293 1989 aaKnown RBP8.66□□□□□ -1.02
SF3B2-216ENST00000534765 ZFHX4Q86UP3 3567 aa8.66□□□□□ -1.02
SF3B2-216ENST00000534765 HEPACAM2A8MVW5 462 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 TRIM77I1YAP6 450 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 H2AFYO75367 372 aaKnown RBP8.65□□□□□ -1.02
SF3B2-216ENST00000534765 APOC1P02654 83 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 LPOP22079 712 aaPredicted RBP8.65□□□□□ -1.02
SF3B2-216ENST00000534765 GGT5P36269 586 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 HOXC5Q00444 222 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 RGS1Q08116 209 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 PWP1Q13610 501 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 UGT3A2Q3SY77 523 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 PAN3Q58A45 887 aaKnown RBP8.65□□□□□ -1.02
SF3B2-216ENST00000534765 RUNDC3AQ59EK9 446 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 FAM45BPQ6NSW5 357 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 ZNF613Q6PF04 617 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 ZNF783Q6ZMS7 281 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 ZNF704Q6ZNC4 412 aaPredicted RBP8.65□□□□□ -1.02
SF3B2-216ENST00000534765 DET1Q7L5Y6 550 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 SLC16A13Q7RTY0 426 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 MILR1Q7Z6M3 343 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 CUZD1Q86UP6 607 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 BOLLQ8N9W6 283 aaKnown RBP8.65□□□□□ -1.02
SF3B2-216ENST00000534765 SRFBP1Q8NEF9 429 aaKnown RBP8.65□□□□□ -1.02
SF3B2-216ENST00000534765 DNAJA4Q8WW22 397 aaPredicted RBP8.65□□□□□ -1.02
SF3B2-216ENST00000534765 CIDECQ96AQ7 238 aaPredicted RBP8.65□□□□□ -1.02
SF3B2-216ENST00000534765 TEX12Q9BXU0 123 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 ITPAQ9BY32 194 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 GALNT9Q9HCQ5 603 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 GULP1Q9UBP9 304 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 UBQLN2Q9UHD9 624 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 ERVW-1Q9UQF0 538 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 AP2A2O94973 939 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 S100A6P06703 90 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 TCF3P15923 654 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 JUNBP17275 347 aaPredicted RBP8.65□□□□□ -1.02
SF3B2-216ENST00000534765 ASB18Q6ZVZ8 466 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 UXS1Q8NBZ7 420 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 GPR151Q8TDV0 419 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 CHAC2Q8WUX2 184 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 RBPMSQ93062 196 aaKnown RBP8.65□□□□□ -1.02
SF3B2-216ENST00000534765 FKBP10Q96AY3 582 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 ART5Q96L15 291 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 HBEGFQ99075 208 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 KXD1Q9BQD3 176 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 FAM83CQ9BQN1 747 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 ERVK-6Q9BXR3 956 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 SARS2Q9NP81 518 aaKnown RBP8.65□□□□□ -1.02
SF3B2-216ENST00000534765 IMPAD1Q9NX62 359 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 ZNF624Q9P2J8 865 aaPredicted RBP8.65□□□□□ -1.02
SF3B2-216ENST00000534765 B4GALT6Q9UBX8 382 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 COL4A2P08572 1712 aa8.65□□□□□ -1.02
SF3B2-216ENST00000534765 H0YAE9 185 aa8.65□□□□□ -1.03
SF3B2-216ENST00000534765 ATG12O94817 140 aa8.65□□□□□ -1.03
SF3B2-216ENST00000534765 MASP1P48740 699 aa8.65□□□□□ -1.03
SF3B2-216ENST00000534765 GZMKP49863 264 aa8.65□□□□□ -1.03
SF3B2-216ENST00000534765 ANGPT1Q15389 498 aa8.65□□□□□ -1.03
SF3B2-216ENST00000534765 ZNF425Q6IV72 752 aa8.65□□□□□ -1.03
SF3B2-216ENST00000534765 SERPINA9Q86WD7 417 aa8.65□□□□□ -1.03
SF3B2-216ENST00000534765 OR6M1Q8NGM8 313 aa8.65□□□□□ -1.03
SF3B2-216ENST00000534765 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.65□□□□□ -1.03
SF3B2-216ENST00000534765 ZNF385DQ9H6B1 395 aa8.65□□□□□ -1.03
SF3B2-216ENST00000534765 ASH2LQ9UBL3 628 aa8.65□□□□□ -1.03
SF3B2-216ENST00000534765 LSM7Q9UK45 103 aaKnown RBP8.65□□□□□ -1.03
SF3B2-216ENST00000534765 MYO10Q9HD67 2058 aa8.65□□□□□ -1.03
SF3B2-216ENST00000534765 METTL15A6NJ78 407 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 FAM25EA8MYX2 175 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 BTN3A1O00481 513 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 FABP7O15540 132 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 TXNL1O43396 289 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 PI15O43692 258 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 SSNA1O43805 119 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 KIAA0513O60268 411 aa8.64□□□□□ -1.03
SF3B2-216ENST00000534765 ECI2O75521 394 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms