RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 ZNF700Q9H0M5 742 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 ATG10Q9H0Y0 220 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 SLC26A1Q9H2B4 701 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 OR52A5Q9H2C5 316 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 MS4A5Q9H3V2 200 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 TFB2MQ9H5Q4 396 aaKnown RBP2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 CDCP1Q9H5V8 836 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 ZWILCHQ9H900 591 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 WDR54Q9H977 334 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 MRM3Q9HC36 420 aaKnown RBP2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 ZNF304Q9HCX3 659 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 YAE1D1Q9NRH1 226 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 BEX4Q9NWD9 120 aaPredicted RBP2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 RMND1Q9NWS8 449 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 TRPC4Q9UBN4 977 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 IP6K2Q9UHH9 426 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 TDRKHQ9Y2W6 561 aaKnown RBP2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 ZNF711Q9Y462 761 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 FAM215AQ9Y5M1 114 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 LIPGQ9Y5X9 500 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 GPR45Q9Y5Y3 372 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 DOCK4Q8N1I0 1966 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.77□□□□□ -1.973e-10■□□□□ 8.6
CHMP4A-208ENST00000534106 RYR2Q92736 4967 aa2.77□□□□□ -1.97
CHMP4A-208ENST00000534106 RYR1P21817 5038 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 ARID1AO14497 2285 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 A0A0J9YVX5 310 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 A0A0J9YY10 115 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 HYKKA2RU49 373 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 PINLYPA6NC86 204 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 KRT87PA6NCN2 255 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 CLCA1A8K7I4 914 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 GABRR3A8MPY1 467 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 FAM166BA8MTA8 275 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 F8VZ95 297 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 G3V3Y1 287 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 KCNK1O00180 336 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 CCL22O00626 93 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 CLDN4O14493 209 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 ARHGEF9O43307 516 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 SPRY1O43609 319 aaPredicted RBP2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 MFSD11O43934 449 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 AKR1B10O60218 316 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 SMPD2O60906 423 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 KCNJ13O60928 360 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 TMEM127O75204 238 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 PMPCBO75439 489 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 SMC2O95347 1197 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 IL33O95760 270 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 GNA14O95837 355 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 MBD3O95983 291 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 HRGP04196 525 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 SLC35G4P0C7Q5 338 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 PIM1P11309 404 aaPredicted RBP2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 UCHL3P15374 230 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 TFEBP19484 476 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 MSH3P20585 1137 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 CXCR2P25025 360 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 NDUFS1P28331 727 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 AKT1P31749 480 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 HTR7P34969 479 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 MTIF2P46199 727 aaKnown RBP2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 NSFP46459 744 aaKnown RBP2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 SLC16A1P53985 500 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 ARSFP54793 590 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 CSE1LP55060 971 aaKnown RBP2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 MANFP55145 182 aaKnown RBP2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 CDH6P55285 790 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 DCDC1P59894 354 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 RPL26P61254 145 aaKnown RBP2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 GBE1Q04446 702 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 OCA2Q04671 838 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 ZBTB17Q13105 803 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 TNK1Q13470 666 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 BOP1Q14137 746 aaKnown RBP2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 TRIM25Q14258 630 aaKnown RBP2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 MLC1Q15049 377 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 PDCD1Q15116 288 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 TYSND1Q2T9J0 566 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 BTBD16Q32M84 506 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 ZNF658BQ4V348 819 aaPredicted RBP2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 CT83Q5H943 113 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 KAZNQ674X7 775 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 HIST2H2BDQ6DRA6 164 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 PODNL1Q6PEZ8 512 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 FIGLAQ6QHK4 219 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 TMEM205Q6UW68 189 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 UNC5DQ6UXZ4 953 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 SEM1Q6ZVN7 128 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 MON1BQ7L1V2 547 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 NLRP9Q7RTR0 991 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 MDGA2Q7Z553 956 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 RAVER1Q8IY67 606 aaKnown RBP2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 MCOLN2Q8IZK6 566 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 CLDN19Q8N6F1 224 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 LINC01555Q8NAE3 123 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 RELL2Q8NC24 303 aaPredicted RBP2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 NAXEQ8NCW5 288 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 ZNF398Q8TD17 642 aa2.76□□□□□ -1.97
CHMP4A-208ENST00000534106 BRSK1Q8TDC3 778 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms