RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 VPS4BO75351 444 aa16.45■□□□□ 0.22
NXF1-216ENST00000533499 IL3P08700 152 aa16.45■□□□□ 0.22
NXF1-216ENST00000533499 TROVE2P10155 538 aaKnown RBP eCLIP16.45■□□□□ 0.22
NXF1-216ENST00000533499 NR2F6P10588 404 aa16.45■□□□□ 0.22
NXF1-216ENST00000533499 PRKAR1AP10644 381 aa16.45■□□□□ 0.22
NXF1-216ENST00000533499 PRPH2P23942 346 aa16.45■□□□□ 0.22
NXF1-216ENST00000533499 TAS2R50P59544 299 aa16.45■□□□□ 0.22
NXF1-216ENST00000533499 ID2Q02363 134 aa16.45■□□□□ 0.22
NXF1-216ENST00000533499 SLC9B1Q4ZJI4 515 aa16.45■□□□□ 0.22
NXF1-216ENST00000533499 BROXQ5VW32 411 aa16.45■□□□□ 0.22
NXF1-216ENST00000533499 IL23RQ5VWK5 629 aa16.45■□□□□ 0.22
NXF1-216ENST00000533499 ACAD11Q709F0 780 aa16.45■□□□□ 0.22
NXF1-216ENST00000533499 MAVSQ7Z434 540 aa16.45■□□□□ 0.22
NXF1-216ENST00000533499 SPACA3Q8IXA5 215 aa16.45■□□□□ 0.22
NXF1-216ENST00000533499 OR2Y1Q8NGV0 311 aa16.45■□□□□ 0.22
NXF1-216ENST00000533499 C16orf78Q8WTQ4 265 aa16.45■□□□□ 0.22
NXF1-216ENST00000533499 METTL21AQ8WXB1 218 aa16.45■□□□□ 0.22
NXF1-216ENST00000533499 STARD8Q92502 1023 aa16.45■□□□□ 0.22
NXF1-216ENST00000533499 PTCHD1Q96NR3 888 aa16.45■□□□□ 0.22
NXF1-216ENST00000533499 TSSK3Q96PN8 268 aa16.45■□□□□ 0.22
NXF1-216ENST00000533499 OR1F2PQ96R84 312 aa16.45■□□□□ 0.22
NXF1-216ENST00000533499 CCNL2Q96S94 520 aaPredicted RBP16.45■□□□□ 0.22
NXF1-216ENST00000533499 SPSB2Q99619 263 aa16.45■□□□□ 0.22
NXF1-216ENST00000533499 FAIM2Q9BWQ8 316 aa16.45■□□□□ 0.22
NXF1-216ENST00000533499 TRIM55Q9BYV6 548 aa16.45■□□□□ 0.22
NXF1-216ENST00000533499 FAM107BQ9H098 131 aa16.45■□□□□ 0.22
NXF1-216ENST00000533499 SLC26A1Q9H2B4 701 aa16.45■□□□□ 0.22
NXF1-216ENST00000533499 WDR54Q9H977 334 aa16.45■□□□□ 0.22
NXF1-216ENST00000533499 TEX10Q9NXF1 929 aaPredicted RBP16.45■□□□□ 0.22
NXF1-216ENST00000533499 MS4A12Q9NXJ0 267 aa16.45■□□□□ 0.22
NXF1-216ENST00000533499 KCMF1Q9P0J7 381 aa16.45■□□□□ 0.22
NXF1-216ENST00000533499 DLGAP4Q9Y2H0 992 aa16.45■□□□□ 0.22
NXF1-216ENST00000533499 ASB4Q9Y574 426 aa16.45■□□□□ 0.22
NXF1-216ENST00000533499 A0A1W2PR48 441 aa16.44■□□□□ 0.22
NXF1-216ENST00000533499 CDC14CA4D256 554 aa16.44■□□□□ 0.22
NXF1-216ENST00000533499 VSTM2BA6NLU5 285 aa16.44■□□□□ 0.22
NXF1-216ENST00000533499 IDSB3KWA1 339 aa16.44■□□□□ 0.22
NXF1-216ENST00000533499 AKAP10O43572 662 aa16.44■□□□□ 0.22
NXF1-216ENST00000533499 PRMT3O60678 531 aa16.44■□□□□ 0.22
NXF1-216ENST00000533499 CREG1O75629 220 aa16.44■□□□□ 0.22
NXF1-216ENST00000533499 LRATO95237 230 aa16.44■□□□□ 0.22
NXF1-216ENST00000533499 AIFM1O95831 613 aa16.44■□□□□ 0.22
NXF1-216ENST00000533499 LBPP18428 481 aa16.44■□□□□ 0.22
NXF1-216ENST00000533499 IL10P22301 178 aa16.44■□□□□ 0.22
NXF1-216ENST00000533499 HNRNPFP52597 415 aaKnown RBP16.44■□□□□ 0.22
NXF1-216ENST00000533499 BTG2P78543 158 aa16.44■□□□□ 0.22
NXF1-216ENST00000533499 FOXK2Q01167 660 aa16.44■□□□□ 0.22
NXF1-216ENST00000533499 TNFRSF17Q02223 184 aa16.44■□□□□ 0.22
NXF1-216ENST00000533499 ZNF763Q0D2J5 394 aa16.44■□□□□ 0.22
NXF1-216ENST00000533499 C2orf80Q0P641 193 aa16.44■□□□□ 0.22
NXF1-216ENST00000533499 TUBB8Q3ZCM7 444 aa16.44■□□□□ 0.22
NXF1-216ENST00000533499 OR4N5Q8IXE1 308 aa16.44■□□□□ 0.22
NXF1-216ENST00000533499 TMEM132CQ8N3T6 1108 aa16.44■□□□□ 0.22
NXF1-216ENST00000533499 LIX1Q8N485 282 aa16.44■□□□□ 0.22
NXF1-216ENST00000533499 TMEM52Q8NDY8 209 aa16.44■□□□□ 0.22
NXF1-216ENST00000533499 GFM2Q969S9 779 aaKnown RBP16.44■□□□□ 0.22
NXF1-216ENST00000533499 TM4SF18Q96CE8 201 aa16.44■□□□□ 0.22
NXF1-216ENST00000533499 TGIF2Q9GZN2 237 aa16.44■□□□□ 0.22
NXF1-216ENST00000533499 CCDC134Q9H6E4 229 aa16.44■□□□□ 0.22
NXF1-216ENST00000533499 RPF2Q9H7B2 306 aaKnown RBP16.44■□□□□ 0.22
NXF1-216ENST00000533499 BAIAP2L1Q9UHR4 511 aa16.44■□□□□ 0.22
NXF1-216ENST00000533499 TMED5Q9Y3A6 229 aa16.44■□□□□ 0.22
NXF1-216ENST00000533499 IGLV3-12A0A075B6K2 115 aa16.43■□□□□ 0.22
NXF1-216ENST00000533499 A0A0G2JND7 137 aa16.43■□□□□ 0.22
NXF1-216ENST00000533499 TMEM8BA6NDV4 472 aa16.43■□□□□ 0.22
NXF1-216ENST00000533499 TERTO14746 1132 aaKnown RBP16.43■□□□□ 0.22
NXF1-216ENST00000533499 PROM1O43490 865 aa16.43■□□□□ 0.22
NXF1-216ENST00000533499 LDB3O75112 727 aa16.43■□□□□ 0.22
NXF1-216ENST00000533499 KLF7O75840 302 aaPredicted RBP16.43■□□□□ 0.22
NXF1-216ENST00000533499 BCKDHAP12694 445 aa16.43■□□□□ 0.22
NXF1-216ENST00000533499 MAOAP21397 527 aa16.43■□□□□ 0.22
NXF1-216ENST00000533499 STX4Q12846 297 aa16.43■□□□□ 0.22
NXF1-216ENST00000533499 MAD2L1Q13257 205 aaPredicted RBP16.43■□□□□ 0.22
NXF1-216ENST00000533499 NSDHLQ15738 373 aa16.43■□□□□ 0.22
NXF1-216ENST00000533499 NDUFAF5Q5TEU4 345 aa16.43■□□□□ 0.22
NXF1-216ENST00000533499 MRM1Q6IN84 353 aaKnown RBP16.43■□□□□ 0.22
NXF1-216ENST00000533499 EPGNQ6UW88 154 aa16.43■□□□□ 0.22
NXF1-216ENST00000533499 CCDC81Q6ZN84 652 aa16.43■□□□□ 0.22
NXF1-216ENST00000533499 PROSER1Q86XN7 944 aa16.43■□□□□ 0.22
NXF1-216ENST00000533499 RAB43Q86YS6 212 aa16.43■□□□□ 0.22
NXF1-216ENST00000533499 ZNF595Q8IYB9 648 aa16.43■□□□□ 0.22
NXF1-216ENST00000533499 MMP21Q8N119 569 aa16.43■□□□□ 0.22
NXF1-216ENST00000533499 ZSCAN1Q8NBB4 408 aa16.43■□□□□ 0.22
NXF1-216ENST00000533499 RFWD2Q8NHY2 731 aa16.43■□□□□ 0.22
NXF1-216ENST00000533499 TSLPQ969D9 159 aa16.43■□□□□ 0.22
NXF1-216ENST00000533499 UCN3Q969E3 161 aa16.43■□□□□ 0.22
NXF1-216ENST00000533499 METTL2AQ96IZ6 378 aaKnown RBP16.43■□□□□ 0.22
NXF1-216ENST00000533499 MARK4Q96L34 752 aa16.43■□□□□ 0.22
NXF1-216ENST00000533499 RILPQ96NA2 401 aa16.43■□□□□ 0.22
NXF1-216ENST00000533499 OR52B2Q96RD2 323 aa16.43■□□□□ 0.22
NXF1-216ENST00000533499 VN1R1Q9GZP7 353 aa16.43■□□□□ 0.22
NXF1-216ENST00000533499 LANCL2Q9NS86 450 aa16.43■□□□□ 0.22
NXF1-216ENST00000533499 C5AR2Q9P296 337 aa16.43■□□□□ 0.22
NXF1-216ENST00000533499 NUP210LQ5VU65 1888 aa16.42■□□□□ 0.22
NXF1-216ENST00000533499 CROCCQ5TZA2 2017 aa16.42■□□□□ 0.22
NXF1-216ENST00000533499 WASHC1A8K0Z3 465 aa16.42■□□□□ 0.22
NXF1-216ENST00000533499 A8MUA0 341 aa16.42■□□□□ 0.22
NXF1-216ENST00000533499 TAF4O00268 1085 aa16.42■□□□□ 0.22
NXF1-216ENST00000533499 CYR61O00622 381 aa16.42■□□□□ 0.22
NXF1-216ENST00000533499 ZNF195O14628 629 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms