RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 FBXW2Q9UKT8 454 aa18.63■□□□□ 0.57
CPSF1-209ENST00000532725 MRPS33Q9Y291 106 aaKnown RBP18.63■□□□□ 0.57
CPSF1-209ENST00000532725 ASB4Q9Y574 426 aa18.63■□□□□ 0.57
CPSF1-209ENST00000532725 ZNF462Q96JM2 2506 aa18.63■□□□□ 0.57
CPSF1-209ENST00000532725 PROM1O43490 865 aa18.62■□□□□ 0.57
CPSF1-209ENST00000532725 TMPRSS11DO60235 418 aa18.62■□□□□ 0.57
CPSF1-209ENST00000532725 ULK1O75385 1050 aa18.62■□□□□ 0.57
CPSF1-209ENST00000532725 ALPPP05187 535 aa18.62■□□□□ 0.57
CPSF1-209ENST00000532725 ENO1P06733 434 aaKnown RBP18.62■□□□□ 0.57
CPSF1-209ENST00000532725 ITGAMP11215 1152 aa18.62■□□□□ 0.57
CPSF1-209ENST00000532725 ALDH3A1P30838 453 aa18.62■□□□□ 0.57
CPSF1-209ENST00000532725 KLRB1Q12918 225 aa18.62■□□□□ 0.57
CPSF1-209ENST00000532725 CFAP157Q5JU67 520 aa18.62■□□□□ 0.57
CPSF1-209ENST00000532725 IRAK1BP1Q5VVH5 260 aa18.62■□□□□ 0.57
CPSF1-209ENST00000532725 JMJD6Q6NYC1 403 aaPredicted RBP18.62■□□□□ 0.57
CPSF1-209ENST00000532725 PAPD4Q6PIY7 484 aaKnown RBP18.62■□□□□ 0.57
CPSF1-209ENST00000532725 IGFL2Q6UWQ7 119 aa18.62■□□□□ 0.57
CPSF1-209ENST00000532725 GPR180Q86V85 440 aa18.62■□□□□ 0.57
CPSF1-209ENST00000532725 METTL4Q8N3J2 472 aa18.62■□□□□ 0.57
CPSF1-209ENST00000532725 RBMXL3Q8N7X1 1067 aaKnown RBP18.62■□□□□ 0.57
CPSF1-209ENST00000532725 M1APQ8TC57 530 aa18.62■□□□□ 0.57
CPSF1-209ENST00000532725 ZBTB9Q96C00 473 aa18.62■□□□□ 0.57
CPSF1-209ENST00000532725 PGM2Q96G03 612 aa18.62■□□□□ 0.57
CPSF1-209ENST00000532725 LPAR4Q99677 370 aa18.62■□□□□ 0.57
CPSF1-209ENST00000532725 MS4A12Q9NXJ0 267 aa18.62■□□□□ 0.57
CPSF1-209ENST00000532725 AHSPQ9NZD4 102 aa18.62■□□□□ 0.57
CPSF1-209ENST00000532725 ATG4BQ9Y4P1 393 aa18.62■□□□□ 0.57
CPSF1-209ENST00000532725 TIMM22Q9Y584 194 aa18.62■□□□□ 0.57
CPSF1-209ENST00000532725 BLACEA4D250 179 aa18.61■□□□□ 0.57
CPSF1-209ENST00000532725 HSD3B1P14060 373 aa18.61■□□□□ 0.57
CPSF1-209ENST00000532725 CPN2P22792 545 aa18.61■□□□□ 0.57
CPSF1-209ENST00000532725 HSD3B2P26439 372 aa18.61■□□□□ 0.57
CPSF1-209ENST00000532725 ETV4P43268 484 aa18.61■□□□□ 0.57
CPSF1-209ENST00000532725 FOXA1P55317 472 aa18.61■□□□□ 0.57
CPSF1-209ENST00000532725 HNRNPH2P55795 449 aaKnown RBP18.61■□□□□ 0.57
CPSF1-209ENST00000532725 ZNF33BQ06732 778 aa18.61■□□□□ 0.57
CPSF1-209ENST00000532725 TBL3Q12788 808 aaKnown RBP18.61■□□□□ 0.57
CPSF1-209ENST00000532725 SLC13A2Q13183 592 aa18.61■□□□□ 0.57
CPSF1-209ENST00000532725 EXT1Q16394 746 aa18.61■□□□□ 0.57
CPSF1-209ENST00000532725 BTBD16Q32M84 506 aa18.61■□□□□ 0.57
CPSF1-209ENST00000532725 TEX19Q8NA77 164 aa18.61■□□□□ 0.57
CPSF1-209ENST00000532725 BRIX1Q8TDN6 353 aaKnown RBP18.61■□□□□ 0.57
CPSF1-209ENST00000532725 ANKRD9Q96BM1 317 aaPredicted RBP18.61■□□□□ 0.57
CPSF1-209ENST00000532725 CNDP1Q96KN2 507 aa18.61■□□□□ 0.57
CPSF1-209ENST00000532725 KCNA7Q96RP8 456 aa18.61■□□□□ 0.57
CPSF1-209ENST00000532725 LMF1Q96S06 567 aa18.61■□□□□ 0.57
CPSF1-209ENST00000532725 MRPL1Q9BYD6 325 aaKnown RBP18.61■□□□□ 0.57
CPSF1-209ENST00000532725 SSU72Q9NP77 194 aaKnown RBP18.61■□□□□ 0.57
CPSF1-209ENST00000532725 TNFRSF12AQ9NP84 129 aa18.61■□□□□ 0.57
CPSF1-209ENST00000532725 ANAPC2Q9UJX6 822 aa18.61■□□□□ 0.57
CPSF1-209ENST00000532725 ADAM29Q9UKF5 820 aa18.61■□□□□ 0.57
CPSF1-209ENST00000532725 SLC12A4Q9UP95 1085 aa18.61■□□□□ 0.57
CPSF1-209ENST00000532725 SPACA6W5XKT8 324 aa18.61■□□□□ 0.57
CPSF1-209ENST00000532725 A0A1W2PR48 441 aa18.6■□□□□ 0.57
CPSF1-209ENST00000532725 SERTM1A2A2V5 107 aa18.6■□□□□ 0.57
CPSF1-209ENST00000532725 H3BQF6 201 aa18.6■□□□□ 0.57
CPSF1-209ENST00000532725 CTIFO43310 598 aaKnown RBP18.6■□□□□ 0.57
CPSF1-209ENST00000532725 DPM1O60762 260 aa18.6■□□□□ 0.57
CPSF1-209ENST00000532725 GBAP04062 536 aa18.6■□□□□ 0.57
CPSF1-209ENST00000532725 KLK1P06870 262 aa18.6■□□□□ 0.57
CPSF1-209ENST00000532725 FAM58BPP0C7Q3 252 aa18.6■□□□□ 0.57
CPSF1-209ENST00000532725 CHN1P15882 459 aa18.6■□□□□ 0.57
CPSF1-209ENST00000532725 TPP2P29144 1249 aaPredicted RBP18.6■□□□□ 0.57
CPSF1-209ENST00000532725 HMOX2P30519 316 aa18.6■□□□□ 0.57
CPSF1-209ENST00000532725 SOX11P35716 441 aa18.6■□□□□ 0.57
CPSF1-209ENST00000532725 CD97P48960 835 aa18.6■□□□□ 0.57
CPSF1-209ENST00000532725 HTR6P50406 440 aa18.6■□□□□ 0.57
CPSF1-209ENST00000532725 SLC26A5P58743 744 aa18.6■□□□□ 0.57
CPSF1-209ENST00000532725 AP2B1P63010 937 aa18.6■□□□□ 0.57
CPSF1-209ENST00000532725 GALNT1Q10472 559 aaPredicted RBP18.6■□□□□ 0.57
CPSF1-209ENST00000532725 C18orf63Q68DL7 685 aa18.6■□□□□ 0.57
CPSF1-209ENST00000532725 H3F3CQ6NXT2 135 aa18.6■□□□□ 0.57
CPSF1-209ENST00000532725 CYP20A1Q6UW02 462 aa18.6■□□□□ 0.57
CPSF1-209ENST00000532725 ISLR2Q6UXK2 745 aa18.6■□□□□ 0.57
CPSF1-209ENST00000532725 CLNKQ7Z7G1 428 aa18.6■□□□□ 0.57
CPSF1-209ENST00000532725 NUDT13Q86X67 352 aa18.6■□□□□ 0.57
CPSF1-209ENST00000532725 NFAM1Q8NET5 270 aaPredicted RBP18.6■□□□□ 0.57
CPSF1-209ENST00000532725 CHTF18Q8WVB6 975 aa18.6■□□□□ 0.57
CPSF1-209ENST00000532725 HBEGFQ99075 208 aa18.6■□□□□ 0.57
CPSF1-209ENST00000532725 MECRQ9BV79 373 aa18.6■□□□□ 0.57
CPSF1-209ENST00000532725 ALOXE3Q9BYJ1 711 aa18.6■□□□□ 0.57
CPSF1-209ENST00000532725 CENPHQ9H3R5 247 aa18.6■□□□□ 0.57
CPSF1-209ENST00000532725 MMP25Q9NPA2 562 aa18.6■□□□□ 0.57
CPSF1-209ENST00000532725 NMRK1Q9NWW6 199 aa18.6■□□□□ 0.57
CPSF1-209ENST00000532725 LYARQ9NX58 379 aaKnown RBP18.6■□□□□ 0.57
CPSF1-209ENST00000532725 VPS29Q9UBQ0 182 aa18.6■□□□□ 0.57
CPSF1-209ENST00000532725 PHF11Q9UIL8 331 aa18.6■□□□□ 0.57
CPSF1-209ENST00000532725 A8MUA0 341 aa18.59■□□□□ 0.57
CPSF1-209ENST00000532725 LDB3O75112 727 aa18.59■□□□□ 0.57
CPSF1-209ENST00000532725 ASPHQ12797 758 aa18.59■□□□□ 0.57
CPSF1-209ENST00000532725 CSTF3Q12996 717 aaKnown RBP18.59■□□□□ 0.57
CPSF1-209ENST00000532725 NADK2Q4G0N4 442 aa18.59■□□□□ 0.57
CPSF1-209ENST00000532725 CRB2Q5IJ48 1285 aa18.59■□□□□ 0.57
CPSF1-209ENST00000532725 ZNF605Q86T29 641 aa18.59■□□□□ 0.57
CPSF1-209ENST00000532725 SIRT6Q8N6T7 355 aa18.59■□□□□ 0.57
CPSF1-209ENST00000532725 EFCAB3Q8N7B9 438 aa18.59■□□□□ 0.57
CPSF1-209ENST00000532725 GBP7Q8N8V2 638 aaPredicted RBP18.59■□□□□ 0.57
CPSF1-209ENST00000532725 ELP5Q8TE02 316 aa18.59■□□□□ 0.57
CPSF1-209ENST00000532725 TANKQ92844 425 aa18.59■□□□□ 0.57
CPSF1-209ENST00000532725 RPF2Q9H7B2 306 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms