RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 SLC41A2Q96JW4 573 aa9.35□□□□□ -0.91
CTNND1-228ENST00000531007 EGLN2Q96KS0 407 aa9.35□□□□□ -0.91
CTNND1-228ENST00000531007 ANKRD27Q96NW4 1050 aa9.35□□□□□ -0.91
CTNND1-228ENST00000531007 GBP5Q96PP8 586 aa9.35□□□□□ -0.91
CTNND1-228ENST00000531007 TEFMQ96QE5 360 aaKnown RBP9.35□□□□□ -0.91
CTNND1-228ENST00000531007 PANX1Q96RD7 426 aa9.35□□□□□ -0.91
CTNND1-228ENST00000531007 CDRT15Q96T59 188 aa9.35□□□□□ -0.91
CTNND1-228ENST00000531007 CGREF1Q99674 301 aa9.35□□□□□ -0.91
CTNND1-228ENST00000531007 SPATA9Q9BWV2 254 aa9.35□□□□□ -0.91
CTNND1-228ENST00000531007 GTPBP2Q9BX10 602 aaKnown RBP9.35□□□□□ -0.91
CTNND1-228ENST00000531007 KLHL31Q9H511 634 aa9.35□□□□□ -0.91
CTNND1-228ENST00000531007 ZNF768Q9H5H4 540 aaKnown RBP9.35□□□□□ -0.91
CTNND1-228ENST00000531007 CAAP1Q9H8G2 361 aa9.35□□□□□ -0.91
CTNND1-228ENST00000531007 IL21RQ9HBE5 538 aa9.35□□□□□ -0.91
CTNND1-228ENST00000531007 ANKHQ9HCJ1 492 aa9.35□□□□□ -0.91
CTNND1-228ENST00000531007 NEUROD4Q9HD90 331 aa9.35□□□□□ -0.91
CTNND1-228ENST00000531007 ACSS1Q9NUB1 689 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-228ENST00000531007 GIMAP4Q9NUV9 329 aa9.35□□□□□ -0.91
CTNND1-228ENST00000531007 SOHLH2Q9NX45 425 aa9.35□□□□□ -0.91
CTNND1-228ENST00000531007 SH3BP4Q9P0V3 963 aa9.35□□□□□ -0.91
CTNND1-228ENST00000531007 SUCOQ9UBS9 1254 aaKnown RBP9.35□□□□□ -0.91
CTNND1-228ENST00000531007 ZNF282Q9UDV7 671 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-228ENST00000531007 KLHL20Q9Y2M5 609 aa9.35□□□□□ -0.91
CTNND1-228ENST00000531007 ASB4Q9Y574 426 aa9.35□□□□□ -0.91
CTNND1-228ENST00000531007 PCDHA9Q9Y5H5 950 aa9.35□□□□□ -0.91
CTNND1-228ENST00000531007 ZFHX2Q9C0A1 2572 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-228ENST00000531007 COL5A1P20908 1838 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-228ENST00000531007 LOC105369274A0A096LPK9 316 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 LOC102723532A0A0G2JNH3 316 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 EVPLLA8MZ36 301 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 H0YIG0 161 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 FXYD1O00168 92 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 PROM1O43490 865 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 AKAP10O43572 662 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 SCN2BO60939 215 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 SH3BGRLO75368 114 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 RASSF9O75901 435 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 KLHL18O94889 574 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 LRATO95237 230 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 ANP32DO95626 131 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 IFI6P09912 130 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 ZNF888P0CJ79 500 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-228ENST00000531007 PIM1P11309 404 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-228ENST00000531007 PVRP15151 417 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 HOXB6P17509 224 aaKnown RBP9.34□□□□□ -0.91
CTNND1-228ENST00000531007 CKMT2P17540 419 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 NELFEP18615 380 aaKnown RBP9.34□□□□□ -0.91
CTNND1-228ENST00000531007 SLC6A2P23975 617 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 ACP1P24666 158 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 PPP2R1BP30154 601 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 FRKP42685 505 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-228ENST00000531007 GABRA4P48169 554 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 DGKQP52824 942 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 ARSFP54793 590 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 VSX2P58304 361 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-228ENST00000531007 BTN3A2P78410 334 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 TXNL4AP83876 142 aaKnown RBP9.34□□□□□ -0.91
CTNND1-228ENST00000531007 ACY1Q03154 408 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 TCF15Q12870 199 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 BIKQ13323 160 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 ILKQ13418 452 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 MUM1Q2TAK8 710 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 AASDHQ4L235 1098 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-228ENST00000531007 C6orf10Q5SRN2 563 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 NDUFAF5Q5TEU4 345 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 FRMPD2BQ6IN97 320 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 NANOGP8Q6NSW7 305 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 TLDC1Q6P9B6 456 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 SLC2A7Q6PXP3 512 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 ZNF793Q6ZN11 406 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 OR4N4Q8N0Y3 316 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 FAM47BQ8NA70 645 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 GOLM1Q8NBJ4 401 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 KCT2Q8NC54 265 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 OR7A2PQ8NGA2 310 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 CDC26Q8NHZ8 85 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 IFI44Q8TCB0 444 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 OR5P2Q8WZ92 322 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 GTPBP3Q969Y2 492 aaKnown RBP9.34□□□□□ -0.91
CTNND1-228ENST00000531007 ASB9Q96DX5 294 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 TRIM15Q9C019 465 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 LRRN3Q9H3W5 708 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 RAD21L1Q9H4I0 556 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 NANOGQ9H9S0 305 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 SERHLQ9NQF3 203 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 ADA2Q9NZK5 511 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 CD300AQ9UGN4 299 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 SLC7A8Q9UHI5 535 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 SERTAD3Q9UJW9 196 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 VPS4AQ9UN37 437 aa9.34□□□□□ -0.91
CTNND1-228ENST00000531007 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.34□□□□□ -0.91
CTNND1-228ENST00000531007 KNL1Q8NG31 2342 aa9.33□□□□□ -0.92
CTNND1-228ENST00000531007 TRBV5-3A0A0A0MS03 114 aa9.33□□□□□ -0.92
CTNND1-228ENST00000531007 IGHV5-51A0A0C4DH38 117 aa9.33□□□□□ -0.92
CTNND1-228ENST00000531007 LY6G6EA0A0G2JKS1 128 aa9.33□□□□□ -0.92
CTNND1-228ENST00000531007 CPED1A4D0V7 1026 aa9.33□□□□□ -0.92
CTNND1-228ENST00000531007 ANKRD65E5RJM6 399 aa9.33□□□□□ -0.92
CTNND1-228ENST00000531007 TMX2-CTNND1H3BSU7 103 aa9.33□□□□□ -0.92
CTNND1-228ENST00000531007 RTCAO00442 366 aaKnown RBP9.33□□□□□ -0.92
CTNND1-228ENST00000531007 PDPK1O15530 556 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms