RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 CLDN16Q9Y5I7 305 aa11.15□□□□□ -0.62
LTBP3-219ENST00000530990 MYZAPP0CAP1 466 aa11.14□□□□□ -0.63
LTBP3-219ENST00000530990 PRR35P0CG20 571 aa11.14□□□□□ -0.63
LTBP3-219ENST00000530990 CHN1P15882 459 aa11.14□□□□□ -0.63
LTBP3-219ENST00000530990 CPN2P22792 545 aa11.14□□□□□ -0.63
LTBP3-219ENST00000530990 PPP2R1BP30154 601 aa11.14□□□□□ -0.63
LTBP3-219ENST00000530990 HSD17B7P56937 341 aa11.14□□□□□ -0.63
LTBP3-219ENST00000530990 TNFRSF17Q02223 184 aa11.14□□□□□ -0.63
LTBP3-219ENST00000530990 CSTF3Q12996 717 aaKnown RBP11.14□□□□□ -0.63
LTBP3-219ENST00000530990 SLC13A2Q13183 592 aa11.14□□□□□ -0.63
LTBP3-219ENST00000530990 RCN2Q14257 317 aa11.14□□□□□ -0.63
LTBP3-219ENST00000530990 MRM1Q6IN84 353 aaKnown RBP11.14□□□□□ -0.63
LTBP3-219ENST00000530990 PTRH1Q86Y79 214 aaKnown RBP11.14□□□□□ -0.63
LTBP3-219ENST00000530990 KBTBD2Q8IY47 623 aa11.14□□□□□ -0.63
LTBP3-219ENST00000530990 ZNF595Q8IYB9 648 aa11.14□□□□□ -0.63
LTBP3-219ENST00000530990 METTL4Q8N3J2 472 aa11.14□□□□□ -0.63
LTBP3-219ENST00000530990 BRIX1Q8TDN6 353 aaKnown RBP11.14□□□□□ -0.63
LTBP3-219ENST00000530990 PKNOX2Q96KN3 472 aa11.14□□□□□ -0.63
LTBP3-219ENST00000530990 LPAR4Q99677 370 aa11.14□□□□□ -0.63
LTBP3-219ENST00000530990 SMAD5Q99717 465 aaKnown RBP11.14□□□□□ -0.63
LTBP3-219ENST00000530990 ACPTQ9BZG2 426 aa11.14□□□□□ -0.63
LTBP3-219ENST00000530990 LHPPQ9H008 270 aa11.14□□□□□ -0.63
LTBP3-219ENST00000530990 LYARQ9NX58 379 aaKnown RBP11.14□□□□□ -0.63
LTBP3-219ENST00000530990 ZNF451Q9Y4E5 1061 aa11.14□□□□□ -0.63
LTBP3-219ENST00000530990 ATG4BQ9Y4P1 393 aa11.14□□□□□ -0.63
LTBP3-219ENST00000530990 ACTL7BQ9Y614 415 aa11.14□□□□□ -0.63
LTBP3-219ENST00000530990 SPACA6W5XKT8 324 aa11.14□□□□□ -0.63
LTBP3-219ENST00000530990 MYOCOSA0A1B0GUC4 107 aa11.13□□□□□ -0.63
LTBP3-219ENST00000530990 SAGE2PA6NJ88 616 aa11.13□□□□□ -0.63
LTBP3-219ENST00000530990 H3BQF6 201 aa11.13□□□□□ -0.63
LTBP3-219ENST00000530990 CLDN4O14493 209 aa11.13□□□□□ -0.63
LTBP3-219ENST00000530990 KALRNO60229 2985 aa11.13□□□□□ -0.63
LTBP3-219ENST00000530990 LDB3O75112 727 aa11.13□□□□□ -0.63
LTBP3-219ENST00000530990 ULK1O75385 1050 aa11.13□□□□□ -0.63
LTBP3-219ENST00000530990 SERPINA7P05543 415 aa11.13□□□□□ -0.63
LTBP3-219ENST00000530990 CHRNGP07510 517 aa11.13□□□□□ -0.63
LTBP3-219ENST00000530990 BPGMP07738 259 aa11.13□□□□□ -0.63
LTBP3-219ENST00000530990 FAM58BPP0C7Q3 252 aa11.13□□□□□ -0.63
LTBP3-219ENST00000530990 ITGAMP11215 1152 aa11.13□□□□□ -0.63
LTBP3-219ENST00000530990 HSD3B1P14060 373 aa11.13□□□□□ -0.63
LTBP3-219ENST00000530990 HSD3B2P26439 372 aa11.13□□□□□ -0.63
LTBP3-219ENST00000530990 TPP2P29144 1249 aaPredicted RBP11.13□□□□□ -0.63
LTBP3-219ENST00000530990 SLC26A5P58743 744 aa11.13□□□□□ -0.63
LTBP3-219ENST00000530990 HMGCS1Q01581 520 aa11.13□□□□□ -0.63
LTBP3-219ENST00000530990 ACTN3Q08043 901 aaPredicted RBP11.13□□□□□ -0.63
LTBP3-219ENST00000530990 GALNT1Q10472 559 aaPredicted RBP11.13□□□□□ -0.63
LTBP3-219ENST00000530990 TBL3Q12788 808 aaKnown RBP11.13□□□□□ -0.63
LTBP3-219ENST00000530990 ASPHQ12797 758 aa11.13□□□□□ -0.63
LTBP3-219ENST00000530990 BTBD16Q32M84 506 aa11.13□□□□□ -0.63
LTBP3-219ENST00000530990 COLEC12Q5KU26 742 aa11.13□□□□□ -0.63
LTBP3-219ENST00000530990 IRAK1BP1Q5VVH5 260 aa11.13□□□□□ -0.63
LTBP3-219ENST00000530990 C18orf63Q68DL7 685 aa11.13□□□□□ -0.63
LTBP3-219ENST00000530990 PLAG1Q6DJT9 500 aa11.13□□□□□ -0.63
LTBP3-219ENST00000530990 CLEC6AQ6EIG7 209 aa11.13□□□□□ -0.63
LTBP3-219ENST00000530990 CYP20A1Q6UW02 462 aa11.13□□□□□ -0.63
LTBP3-219ENST00000530990 SCIMPQ6UWF3 145 aa11.13□□□□□ -0.63
LTBP3-219ENST00000530990 COMMD6Q7Z4G1 85 aa11.13□□□□□ -0.63
LTBP3-219ENST00000530990 CUZD1Q86UP6 607 aa11.13□□□□□ -0.63
LTBP3-219ENST00000530990 GPR180Q86V85 440 aa11.13□□□□□ -0.63
LTBP3-219ENST00000530990 C1orf52Q8N6N3 182 aaKnown RBP11.13□□□□□ -0.63
LTBP3-219ENST00000530990 SIRT6Q8N6T7 355 aa11.13□□□□□ -0.63
LTBP3-219ENST00000530990 TMBIM4Q9HC24 238 aa11.13□□□□□ -0.63
LTBP3-219ENST00000530990 ZBTB20Q9HC78 741 aaPredicted RBP11.13□□□□□ -0.63
LTBP3-219ENST00000530990 TEX10Q9NXF1 929 aaPredicted RBP11.13□□□□□ -0.63
LTBP3-219ENST00000530990 VPS29Q9UBQ0 182 aa11.13□□□□□ -0.63
LTBP3-219ENST00000530990 PHF11Q9UIL8 331 aa11.13□□□□□ -0.63
LTBP3-219ENST00000530990 ADAM29Q9UKF5 820 aa11.13□□□□□ -0.63
LTBP3-219ENST00000530990 ASB4Q9Y574 426 aa11.13□□□□□ -0.63
LTBP3-219ENST00000530990 FASNP49327 2511 aaKnown RBP11.12□□□□□ -0.63
LTBP3-219ENST00000530990 A0A1W2PR48 441 aa11.12□□□□□ -0.63
LTBP3-219ENST00000530990 BLACEA4D250 179 aa11.12□□□□□ -0.63
LTBP3-219ENST00000530990 A8MUA0 341 aa11.12□□□□□ -0.63
LTBP3-219ENST00000530990 TM9SF1O15321 606 aa11.12□□□□□ -0.63
LTBP3-219ENST00000530990 FGF17O60258 216 aa11.12□□□□□ -0.63
LTBP3-219ENST00000530990 NPHS1O60500 1241 aa11.12□□□□□ -0.63
LTBP3-219ENST00000530990 CTNSO60931 367 aa11.12□□□□□ -0.63
LTBP3-219ENST00000530990 CRCPO75575 148 aa11.12□□□□□ -0.63
LTBP3-219ENST00000530990 AIFM1O95831 613 aa11.12□□□□□ -0.63
LTBP3-219ENST00000530990 ALPPP05187 535 aa11.12□□□□□ -0.63
LTBP3-219ENST00000530990 KLK1P06870 262 aa11.12□□□□□ -0.63
LTBP3-219ENST00000530990 NR2F6P10588 404 aa11.12□□□□□ -0.63
LTBP3-219ENST00000530990 H2AFXP16104 143 aaPredicted RBP11.12□□□□□ -0.63
LTBP3-219ENST00000530990 SERPINB3P29508 390 aa11.12□□□□□ -0.63
LTBP3-219ENST00000530990 ARRB2P32121 409 aa11.12□□□□□ -0.63
LTBP3-219ENST00000530990 BUD31P41223 144 aaPredicted RBP11.12□□□□□ -0.63
LTBP3-219ENST00000530990 SERPINB4P48594 390 aa11.12□□□□□ -0.63
LTBP3-219ENST00000530990 CD97P48960 835 aa11.12□□□□□ -0.63
LTBP3-219ENST00000530990 ID2Q02363 134 aa11.12□□□□□ -0.63
LTBP3-219ENST00000530990 ZNF33BQ06732 778 aa11.12□□□□□ -0.63
LTBP3-219ENST00000530990 MPP2Q14168 576 aa11.12□□□□□ -0.63
LTBP3-219ENST00000530990 EXT1Q16394 746 aa11.12□□□□□ -0.63
LTBP3-219ENST00000530990 AGAP7PQ5VUJ5 663 aa11.12□□□□□ -0.63
LTBP3-219ENST00000530990 ATG14Q6ZNE5 492 aa11.12□□□□□ -0.63
LTBP3-219ENST00000530990 RIPOR1Q6ZS17 1223 aa11.12□□□□□ -0.63
LTBP3-219ENST00000530990 PAGE2Q7Z2X7 111 aa11.12□□□□□ -0.63
LTBP3-219ENST00000530990 GBP7Q8N8V2 638 aaPredicted RBP11.12□□□□□ -0.63
LTBP3-219ENST00000530990 PSMF1Q92530 271 aa11.12□□□□□ -0.63
LTBP3-219ENST00000530990 ANKRD9Q96BM1 317 aaPredicted RBP11.12□□□□□ -0.63
LTBP3-219ENST00000530990 CNDP1Q96KN2 507 aa11.12□□□□□ -0.63
LTBP3-219ENST00000530990 AGAP4Q96P64 663 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms