RNA–Protein interactions for RNA: ENST00000529224.1

SSH3-206, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-206ENST00000529224 IPPKQ9H8X2 491 aa12.23□□□□□ -0.45
SSH3-206ENST00000529224 ADAP2Q9NPF8 381 aa12.23□□□□□ -0.45
SSH3-206ENST00000529224 DMRT3Q9NQL9 472 aa12.23□□□□□ -0.45
SSH3-206ENST00000529224 ZNF358Q9NW07 568 aa12.23□□□□□ -0.45
SSH3-206ENST00000529224 KCMF1Q9P0J7 381 aa12.23□□□□□ -0.45
SSH3-206ENST00000529224 XPR1Q9UBH6 696 aa12.23□□□□□ -0.45
SSH3-206ENST00000529224 SLC5A6Q9Y289 635 aa12.23□□□□□ -0.45
SSH3-206ENST00000529224 FREM3P0C091 2139 aa12.23□□□□□ -0.45
SSH3-206ENST00000529224 CRYBG3Q68DQ2 2970 aa12.22□□□□□ -0.45
SSH3-206ENST00000529224 H0YIV9 168 aa12.22□□□□□ -0.45
SSH3-206ENST00000529224 STX16-NPEPL1H3BU86 382 aa12.22□□□□□ -0.45
SSH3-206ENST00000529224 RTCAO00442 366 aaKnown RBP12.22□□□□□ -0.45
SSH3-206ENST00000529224 FCHO1O14526 889 aa12.22□□□□□ -0.45
SSH3-206ENST00000529224 STX16O14662 325 aa12.22□□□□□ -0.45
SSH3-206ENST00000529224 MAN1A2O60476 641 aa12.22□□□□□ -0.45
SSH3-206ENST00000529224 SH3BGRLO75368 114 aa12.22□□□□□ -0.45
SSH3-206ENST00000529224 SIX3O95343 332 aaPredicted RBP12.22□□□□□ -0.45
SSH3-206ENST00000529224 CLDN1O95832 211 aa12.22□□□□□ -0.45
SSH3-206ENST00000529224 RHOXF2BP0C7M4 288 aa12.22□□□□□ -0.45
SSH3-206ENST00000529224 PTX3P26022 381 aaPredicted RBP12.22□□□□□ -0.45
SSH3-206ENST00000529224 EEF1DP29692 281 aaKnown RBP12.22□□□□□ -0.45
SSH3-206ENST00000529224 CLCN2P51788 898 aa12.22□□□□□ -0.45
SSH3-206ENST00000529224 ARFIP1P53367 373 aa12.22□□□□□ -0.45
SSH3-206ENST00000529224 MLF1P58340 268 aa12.22□□□□□ -0.45
SSH3-206ENST00000529224 OC90Q02509 493 aaPredicted RBP12.22□□□□□ -0.45
SSH3-206ENST00000529224 SERTAD2Q14140 314 aa12.22□□□□□ -0.45
SSH3-206ENST00000529224 OR1C1Q15619 314 aa12.22□□□□□ -0.45
SSH3-206ENST00000529224 ELAVL1Q15717 326 aaKnown RBP12.22□□□□□ -0.45
SSH3-206ENST00000529224 CLNKQ7Z7G1 428 aa12.22□□□□□ -0.45
SSH3-206ENST00000529224 CNPY4Q8N129 248 aa12.22□□□□□ -0.45
SSH3-206ENST00000529224 TMEM132CQ8N3T6 1108 aa12.22□□□□□ -0.45
SSH3-206ENST00000529224 PTGR2Q8N8N7 351 aaPredicted RBP12.22□□□□□ -0.45
SSH3-206ENST00000529224 L3MBTL4Q8NA19 623 aa12.22□□□□□ -0.45
SSH3-206ENST00000529224 TMEM178AQ8NBL3 297 aa12.22□□□□□ -0.45
SSH3-206ENST00000529224 APCDD1LQ8NCL9 501 aa12.22□□□□□ -0.45
SSH3-206ENST00000529224 C7orf57Q8NEG2 295 aa12.22□□□□□ -0.45
SSH3-206ENST00000529224 ATP6V1E2Q96A05 226 aa12.22□□□□□ -0.45
SSH3-206ENST00000529224 MTBPQ96DY7 904 aa12.22□□□□□ -0.45
SSH3-206ENST00000529224 PHF21BQ96EK2 531 aa12.22□□□□□ -0.45
SSH3-206ENST00000529224 VMP1Q96GC9 406 aa12.22□□□□□ -0.45
SSH3-206ENST00000529224 SIGLEC12Q96PQ1 595 aa12.22□□□□□ -0.45
SSH3-206ENST00000529224 MTERF1Q99551 399 aaKnown RBP12.22□□□□□ -0.45
SSH3-206ENST00000529224 MAPKAP1Q9BPZ7 522 aa12.22□□□□□ -0.45
SSH3-206ENST00000529224 MRPL57Q9BQC6 102 aaKnown RBP12.22□□□□□ -0.45
SSH3-206ENST00000529224 RHOXF2Q9BQY4 288 aa12.22□□□□□ -0.45
SSH3-206ENST00000529224 CCDC77Q9BR77 488 aa12.22□□□□□ -0.45
SSH3-206ENST00000529224 PPIEQ9UNP9 301 aaKnown RBP12.22□□□□□ -0.45
SSH3-206ENST00000529224 CLDN16Q9Y5I7 305 aa12.22□□□□□ -0.45
SSH3-206ENST00000529224 CACNA1CQ13936 2221 aa12.22□□□□□ -0.45
SSH3-206ENST00000529224 TRBV11-1A0A0K0K1C0 115 aa12.21□□□□□ -0.45
SSH3-206ENST00000529224 TGFBR3LH3BV60 316 aa12.21□□□□□ -0.45
SSH3-206ENST00000529224 SAP18O00422 153 aaKnown RBP12.21□□□□□ -0.45
SSH3-206ENST00000529224 RIPK2O43353 540 aa12.21□□□□□ -0.45
SSH3-206ENST00000529224 CLDN9O95484 217 aa12.21□□□□□ -0.45
SSH3-206ENST00000529224 IFNA16P05015 189 aa12.21□□□□□ -0.45
SSH3-206ENST00000529224 CPN2P22792 545 aa12.21□□□□□ -0.45
SSH3-206ENST00000529224 COL8A1P27658 744 aa12.21□□□□□ -0.45
SSH3-206ENST00000529224 TPP2P29144 1249 aaPredicted RBP12.21□□□□□ -0.45
SSH3-206ENST00000529224 PPP2R1BP30154 601 aa12.21□□□□□ -0.45
SSH3-206ENST00000529224 ARL1P40616 181 aaPredicted RBP12.21□□□□□ -0.45
SSH3-206ENST00000529224 TDGF1P3P51864 188 aa12.21□□□□□ -0.45
SSH3-206ENST00000529224 CCNG1P51959 295 aa12.21□□□□□ -0.45
SSH3-206ENST00000529224 RPS13P62277 151 aaKnown RBP12.21□□□□□ -0.45
SSH3-206ENST00000529224 STX4Q12846 297 aa12.21□□□□□ -0.45
SSH3-206ENST00000529224 SLAMF1Q13291 335 aa12.21□□□□□ -0.45
SSH3-206ENST00000529224 CPSF6Q16630 551 aaKnown RBP eCLIP12.21□□□□□ -0.45
SSH3-206ENST00000529224 OR4C11Q6IEV9 310 aa12.21□□□□□ -0.45
SSH3-206ENST00000529224 ADGRD1Q6QNK2 874 aa12.21□□□□□ -0.45
SSH3-206ENST00000529224 TIFABQ6ZNK6 161 aa12.21□□□□□ -0.45
SSH3-206ENST00000529224 ARMC10Q8N2F6 343 aa12.21□□□□□ -0.45
SSH3-206ENST00000529224 RNF175Q8N4F7 328 aa12.21□□□□□ -0.45
SSH3-206ENST00000529224 DAZLQ92904 295 aaKnown RBP12.21□□□□□ -0.45
SSH3-206ENST00000529224 NCLNQ969V3 563 aa12.21□□□□□ -0.45
SSH3-206ENST00000529224 SCMH1Q96GD3 660 aa12.21□□□□□ -0.45
SSH3-206ENST00000529224 ALOXE3Q9BYJ1 711 aa12.21□□□□□ -0.45
SSH3-206ENST00000529224 MRPL46Q9H2W6 279 aaKnown RBP12.21□□□□□ -0.45
SSH3-206ENST00000529224 NOL11Q9H8H0 719 aaKnown RBP12.21□□□□□ -0.45
SSH3-206ENST00000529224 KLHL1Q9NR64 748 aa12.21□□□□□ -0.45
SSH3-206ENST00000529224 MS4A12Q9NXJ0 267 aa12.21□□□□□ -0.45
SSH3-206ENST00000529224 ANKRD10Q9NXR5 420 aa12.21□□□□□ -0.45
SSH3-206ENST00000529224 PSD3Q9NYI0 1048 aa12.21□□□□□ -0.45
SSH3-206ENST00000529224 LRFN1Q9P244 771 aa12.21□□□□□ -0.45
SSH3-206ENST00000529224 VTI1BQ9UEU0 232 aa12.21□□□□□ -0.45
SSH3-206ENST00000529224 PHF11Q9UIL8 331 aa12.21□□□□□ -0.45
SSH3-206ENST00000529224 OSGIN2Q9Y236 505 aa12.21□□□□□ -0.45
SSH3-206ENST00000529224 RNF11Q9Y3C5 154 aa12.21□□□□□ -0.45
SSH3-206ENST00000529224 CLCA3PQ9Y6N3 262 aa12.21□□□□□ -0.45
SSH3-206ENST00000529224 FOXE1O00358 373 aaPredicted RBP12.2□□□□□ -0.46
SSH3-206ENST00000529224 PLPP1O14494 284 aa12.2□□□□□ -0.46
SSH3-206ENST00000529224 ZFAND5O76080 213 aa12.2□□□□□ -0.46
SSH3-206ENST00000529224 TLX1P31314 330 aaPredicted RBP12.2□□□□□ -0.46
SSH3-206ENST00000529224 TRHRP34981 398 aaPredicted RBP12.2□□□□□ -0.46
SSH3-206ENST00000529224 CYB561P49447 251 aa12.2□□□□□ -0.46
SSH3-206ENST00000529224 ST13P50502 369 aaKnown RBP12.2□□□□□ -0.46
SSH3-206ENST00000529224 CUL3Q13618 768 aa12.2□□□□□ -0.46
SSH3-206ENST00000529224 ZRSR2Q15696 482 aaKnown RBP12.2□□□□□ -0.46
SSH3-206ENST00000529224 C10orf62Q5T681 223 aaPredicted RBP12.2□□□□□ -0.46
SSH3-206ENST00000529224 ZNF787Q6DD87 383 aa12.2□□□□□ -0.46
SSH3-206ENST00000529224 SPINK14Q6IE38 97 aa12.2□□□□□ -0.46
SSH3-206ENST00000529224 GFRALQ6UXV0 394 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms