RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 PRPF39Q86UA1 669 aaKnown RBP4.43□□□□□ -1.7
CSDE1-212ENST00000529046 LINC00346Q8IVM7 164 aa4.43□□□□□ -1.7
CSDE1-212ENST00000529046 ZC3H3Q8IXZ2 948 aaKnown RBP4.43□□□□□ -1.7
CSDE1-212ENST00000529046 HDDC3Q8N4P3 179 aa4.43□□□□□ -1.7
CSDE1-212ENST00000529046 ZNF557Q8N988 423 aaPredicted RBP4.43□□□□□ -1.7
CSDE1-212ENST00000529046 C12orf29Q8N999 325 aa4.43□□□□□ -1.7
CSDE1-212ENST00000529046 FBXL13Q8NEE6 735 aa4.43□□□□□ -1.7
CSDE1-212ENST00000529046 SPATA20Q8TB22 786 aa4.43□□□□□ -1.7
CSDE1-212ENST00000529046 TAS1R2Q8TE23 839 aa4.43□□□□□ -1.7
CSDE1-212ENST00000529046 SNRNP27Q8WVK2 155 aaKnown RBP4.43□□□□□ -1.7
CSDE1-212ENST00000529046 CCDC47Q96A33 483 aaKnown RBP4.43□□□□□ -1.7
CSDE1-212ENST00000529046 AZIN2Q96A70 460 aa4.43□□□□□ -1.7
CSDE1-212ENST00000529046 PIWIL1Q96J94 861 aaKnown RBP4.43□□□□□ -1.7
CSDE1-212ENST00000529046 SEMA3CQ99985 751 aa4.43□□□□□ -1.7
CSDE1-212ENST00000529046 LRRC1Q9BTT6 524 aa4.43□□□□□ -1.7
CSDE1-212ENST00000529046 NACA2Q9H009 215 aa4.43□□□□□ -1.7
CSDE1-212ENST00000529046 FKRPQ9H9S5 495 aa4.43□□□□□ -1.7
CSDE1-212ENST00000529046 NMUR1Q9HB89 426 aa4.43□□□□□ -1.7
CSDE1-212ENST00000529046 DNAJC17Q9NVM6 304 aaKnown RBP4.43□□□□□ -1.7
CSDE1-212ENST00000529046 ELOVL2Q9NXB9 296 aa4.43□□□□□ -1.7
CSDE1-212ENST00000529046 MDFICQ9P1T7 246 aa4.43□□□□□ -1.7
CSDE1-212ENST00000529046 POLG2Q9UHN1 485 aa4.43□□□□□ -1.7
CSDE1-212ENST00000529046 RALYQ9UKM9 306 aaKnown RBP4.43□□□□□ -1.7
CSDE1-212ENST00000529046 MYO16Q9Y6X6 1858 aa4.43□□□□□ -1.7
CSDE1-212ENST00000529046 CACNA1BQ00975 2339 aa4.43□□□□□ -1.7
CSDE1-212ENST00000529046 FRYQ5TBA9 3013 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 LOC100509620A0A075B734 347 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 A0A087WYN8 130 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 C10orf142B7Z368 130 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 E9PAM4 449 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 XPO1O14980 1071 aaKnown RBP4.42□□□□□ -1.7
CSDE1-212ENST00000529046 DFNA5O60443 496 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 RSL1D1O76021 490 aaKnown RBP4.42□□□□□ -1.7
CSDE1-212ENST00000529046 CCDC130P13994 396 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 CASP1P29466 404 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 RAD52P43351 418 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 SYKP43405 635 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 MFAP3P55082 362 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 ISL1P61371 349 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 YWHAEP62258 255 aaKnown RBP4.42□□□□□ -1.7
CSDE1-212ENST00000529046 SIRPAP78324 504 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 FKBP3Q00688 224 aaKnown RBP4.42□□□□□ -1.7
CSDE1-212ENST00000529046 KDSRQ06136 332 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 BECN1Q14457 450 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 FUT11Q495W5 492 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 ZNF672Q499Z4 452 aaPredicted RBP4.42□□□□□ -1.7
CSDE1-212ENST00000529046 MPPE1Q53F39 396 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 TMEM35AQ53FP2 167 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 C10orf120Q5SQS8 335 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 GFI1BQ5VTD9 330 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 ZDHHC20Q5W0Z9 365 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 PLEKHM3Q6ZWE6 761 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 USP43Q70EL4 1123 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 DSG4Q86SJ6 1040 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 ADIPOR2Q86V24 386 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 EXOC3L1Q86VI1 746 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 HSCBQ8IWL3 235 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 TAGAPQ8N103 731 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 C17orf53Q8N3J3 647 aaPredicted RBP4.42□□□□□ -1.7
CSDE1-212ENST00000529046 MINDY1Q8N5J2 469 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 SLC4A11Q8NBS3 891 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 OR52I2Q8NH67 350 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 GSDMBQ8TAX9 411 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 NR4A3Q92570 626 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 WBP2Q969T9 261 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 ERP27Q96DN0 273 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 GSDMAQ96QA5 445 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 SERINC2Q96SA4 455 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 NUDT16L1Q9BRJ7 211 aaKnown RBP4.42□□□□□ -1.7
CSDE1-212ENST00000529046 HGH1Q9BTY7 390 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 NUP58Q9BVL2 599 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 TMEM245Q9H330 911 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 KCNK15Q9H427 330 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 RAD21L1Q9H4I0 556 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 LRRC4Q9HBW1 653 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 APOBEC3GQ9HC16 384 aaKnown RBP4.42□□□□□ -1.7
CSDE1-212ENST00000529046 CISHQ9NSE2 258 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 FAM49BQ9NUQ9 324 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 RAB20Q9NX57 234 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 HMGXB4Q9UGU5 601 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 SCML1Q9UN30 329 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 USP24Q9UPU5 2620 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 B3GALT5Q9Y2C3 310 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 HBS1LQ9Y450 684 aaKnown RBP4.42□□□□□ -1.7
CSDE1-212ENST00000529046 ZNF711Q9Y462 761 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 ATP6V1DQ9Y5K8 247 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 CHD6Q8TD26 2715 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 CHD8Q9HCK8 2581 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 ABCA7Q8IZY2 2146 aa4.42□□□□□ -1.7
CSDE1-212ENST00000529046 TNRC6BQ9UPQ9 1833 aaKnown RBP4.42□□□□□ -1.7
CSDE1-212ENST00000529046 NUP205Q92621 2012 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 DMXL2Q8TDJ6 3036 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 CNOT1A5YKK6 2376 aaKnown RBP4.41□□□□□ -1.7
CSDE1-212ENST00000529046 SPTBN2O15020 2390 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 SPEGQ15772 3267 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 A0A1B0GVL5 298 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 CLGNO14967 610 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 CETN3O15182 167 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 P4HA2O15460 535 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 FLRT2O43155 660 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms