RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 TPT1P8Q9HAU6 139 aa6.95□□□□□ -1.3
CTNND1-218ENST00000528232 SPHK2Q9NRA0 654 aa6.95□□□□□ -1.3
CTNND1-218ENST00000528232 TMLHEQ9NVH6 421 aa6.95□□□□□ -1.3
CTNND1-218ENST00000528232 MARCH4Q9P2E8 410 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-218ENST00000528232 GIMAP2Q9UG22 337 aa6.95□□□□□ -1.3
CTNND1-218ENST00000528232 MRPS17Q9Y2R5 130 aaKnown RBP6.95□□□□□ -1.3
CTNND1-218ENST00000528232 PCDHB11Q9Y5F2 797 aa6.95□□□□□ -1.3
CTNND1-218ENST00000528232 ABCA3Q99758 1704 aa6.95□□□□□ -1.3
CTNND1-218ENST00000528232 PRSS51A0A1B0GVH4 220 aa6.95□□□□□ -1.3
CTNND1-218ENST00000528232 TRBC2A0A5B9 178 aa6.95□□□□□ -1.3
CTNND1-218ENST00000528232 KRBA1A5PL33 1030 aa6.95□□□□□ -1.3
CTNND1-218ENST00000528232 G3V2L1 256 aa6.95□□□□□ -1.3
CTNND1-218ENST00000528232 TLR4O00206 839 aa6.95□□□□□ -1.3
CTNND1-218ENST00000528232 MUSKO15146 869 aa6.95□□□□□ -1.3
CTNND1-218ENST00000528232 INMTO95050 263 aa6.95□□□□□ -1.3
CTNND1-218ENST00000528232 HNRNPA1P09651 372 aaKnown RBP eCLIP6.95□□□□□ -1.3
CTNND1-218ENST00000528232 TCEA1P23193 301 aaKnown RBP6.95□□□□□ -1.3
CTNND1-218ENST00000528232 DNASE1P24855 282 aa6.95□□□□□ -1.3
CTNND1-218ENST00000528232 GJA5P36382 358 aa6.95□□□□□ -1.3
CTNND1-218ENST00000528232 MAP2K3P46734 347 aa6.95□□□□□ -1.3
CTNND1-218ENST00000528232 DNASE1L1P49184 302 aa6.95□□□□□ -1.3
CTNND1-218ENST00000528232 FAM189A2Q15884 450 aa6.95□□□□□ -1.3
CTNND1-218ENST00000528232 XKR4Q5GH76 650 aa6.95□□□□□ -1.3
CTNND1-218ENST00000528232 TOR1AIP1Q5JTV8 583 aa6.95□□□□□ -1.3
CTNND1-218ENST00000528232 LY6G5CQ5SRR4 150 aa6.95□□□□□ -1.3
CTNND1-218ENST00000528232 AADACL4Q5VUY2 407 aa6.95□□□□□ -1.3
CTNND1-218ENST00000528232 OGFOD2Q6N063 350 aa6.95□□□□□ -1.3
CTNND1-218ENST00000528232 NANOGP8Q6NSW7 305 aa6.95□□□□□ -1.3
CTNND1-218ENST00000528232 FAM199XQ6PEV8 388 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-218ENST00000528232 MINDY1Q8N5J2 469 aa6.95□□□□□ -1.3
CTNND1-218ENST00000528232 ZNF433Q8N7K0 673 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-218ENST00000528232 OR56A1Q8NGH5 318 aa6.95□□□□□ -1.3
CTNND1-218ENST00000528232 NSUN5Q96P11 429 aaKnown RBP6.95□□□□□ -1.3
CTNND1-218ENST00000528232 KCNC2Q96PR1 638 aa6.95□□□□□ -1.3
CTNND1-218ENST00000528232 GAS2L1Q99501 681 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-218ENST00000528232 CNPPD1Q9BV87 410 aa6.95□□□□□ -1.3
CTNND1-218ENST00000528232 NANOGQ9H9S0 305 aa6.95□□□□□ -1.3
CTNND1-218ENST00000528232 IFT46Q9NQC8 304 aa6.95□□□□□ -1.3
CTNND1-218ENST00000528232 ZCCHC3Q9NUD5 404 aaKnown RBP6.95□□□□□ -1.3
CTNND1-218ENST00000528232 UCKL1Q9NWZ5 548 aa6.95□□□□□ -1.3
CTNND1-218ENST00000528232 TVP23BQ9NYZ1 205 aa6.95□□□□□ -1.3
CTNND1-218ENST00000528232 HSPE1-MOB4S4R3N1 261 aa6.95□□□□□ -1.3
CTNND1-218ENST00000528232 HTRA2O43464 458 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-218ENST00000528232 H1F0P07305 194 aaKnown RBP6.94□□□□□ -1.3
CTNND1-218ENST00000528232 IGFALSP35858 605 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 HLCSP50747 726 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 CLCNKAP51800 687 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 GSTM4Q03013 218 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 ZNF763Q0D2J5 394 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 IDNKQ5T6J7 187 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 WDR53Q7Z5U6 358 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-218ENST00000528232 KBTBD6Q86V97 674 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 METTL4Q8N3J2 472 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 CAMKVQ8NCB2 501 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 TFGQ92734 400 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-218ENST00000528232 NXPE2Q96DL1 559 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 RGCCQ9H4X1 137 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 RPF2Q9H7B2 306 aaKnown RBP6.94□□□□□ -1.3
CTNND1-218ENST00000528232 CCM2LQ9NUG4 571 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-218ENST00000528232 STUB1Q9UNE7 303 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 SLX4Q8IY92 1834 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 C2orf78A6NCI8 922 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 TMEM189-UBE2V1I3L0A0 370 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 POLR1CO15160 346 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-218ENST00000528232 NDUFS4O43181 175 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 HCN1O60741 890 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 ALX3O95076 343 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 RASAL1O95294 804 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 POLR2CP19387 275 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-218ENST00000528232 RAB3BP20337 219 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 AZGP1P25311 298 aaKnown RBP6.94□□□□□ -1.3
CTNND1-218ENST00000528232 GDI1P31150 447 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 EIF2DP41214 584 aaKnown RBP6.94□□□□□ -1.3
CTNND1-218ENST00000528232 ETV4P43268 484 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 TMEM115Q12893 351 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-218ENST00000528232 GRB7Q14451 532 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 SLC14A2Q15849 920 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 C4orf46Q504U0 113 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 RAB41Q5JT25 222 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 PSAPL1Q6NUJ1 521 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 PGM2L1Q6PCE3 622 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 ENPP7Q6UWV6 458 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 GRASPQ7Z6J2 395 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-218ENST00000528232 NRSN1Q8IZ57 195 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 GDPD1Q8N9F7 314 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 ZSCAN1Q8NBB4 408 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 ZMIZ2Q8NF64 920 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 OR2L5Q8NG80 312 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 OR5AK3PQ8NH89 298 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 SLC45A3Q96JT2 553 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 PBDC1Q9BVG4 233 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 TRMT61BQ9BVS5 477 aaKnown RBP6.94□□□□□ -1.3
CTNND1-218ENST00000528232 RNF186Q9NXI6 227 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 ZNF639Q9UID6 485 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 UTS2RQ9UKP6 389 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 STRCP1A6NGW2 1772 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 STRCQ7RTU9 1775 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 ERI3O43414 337 aaKnown RBP6.94□□□□□ -1.3
CTNND1-218ENST00000528232 PRKYO43930 277 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 LEFTY1O75610 366 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms